FFCP PHASE1:Mm9::chr1:57028182..57028191,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=212712 | |EntrezGene=212712 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=76 | |||
|TSSclassifier=NA | |||
|UniProt=Q546B3,Q8VI24 | |UniProt=Q546B3,Q8VI24 | ||
|association_with_transcript=-4bp_to_NM_139146,uc007bas.1,uc011wlc.1_5end | |association_with_transcript=-4bp_to_NM_139146,uc007bas.1,uc011wlc.1_5end | ||
|cluster_id=chr1:57028182..57028191,- | |||
|description=CAGE_peak_11_at_Satb2_5end | |description=CAGE_peak_11_at_Satb2_5end | ||
|id=chr1:57028182..57028191,- | |id=chr1:57028182..57028191,- | ||
|ontology_enrichment_celltype=CL:0002609!3.27e-09!6 | |ontology_enrichment_celltype=CL:0002609!3.27e-09!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,1.09e-58,6;CL:0002608,1.12e-29,3;CL:0000117,1.99e-15,23;CL:0000337,1.99e-15,23;CL:0000540,9.45e-11,33;CL:0000047,9.45e-11,33;CL:0000031,9.45e-11,33;CL:0000404,9.45e-11,33;CL:0000393,4.36e-09,39;CL:0000211,4.36e-09,39;CL:0002319,3.12e-08,43;CL:0000221,4.83e-08,44;CL:0000133,4.83e-08,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!3.74e-07!21;UBERON:0001869!3.74e-07!21;UBERON:0000203!3.74e-07!21 | |ontology_enrichment_uberon=UBERON:0000956!3.74e-07!21;UBERON:0001869!3.74e-07!21;UBERON:0000203!3.74e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,6.83e-17,21;UBERON:0001869,6.83e-17,21;UBERON:0000203,6.83e-17,21;UBERON:0001954,3.73e-13,7;UBERON:0003022,3.73e-13,7;UBERON:0002421,3.73e-13,7;UBERON:0000349,3.73e-13,7;UBERON:0002600,3.73e-13,7;UBERON:0003528,3.08e-12,29;UBERON:0002791,3.08e-12,29;UBERON:0001893,3.08e-12,29;UBERON:0002020,1.96e-10,34;UBERON:0002780,4.36e-09,39;UBERON:0001890,4.36e-09,39;UBERON:0006240,4.36e-09,39;UBERON:0003080,7.40e-09,40;UBERON:0002616,1.09e-07,46;UBERON:0000955,1.60e-07,47;UBERON:0006238,1.60e-07,47;UBERON:0003056,3.29e-07,49;UBERON:0001049,8.74e-07,52;UBERON:0005068,8.74e-07,52;UBERON:0006241,8.74e-07,52;UBERON:0007135,8.74e-07,52 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,5.08079100311541,5.13022565660425,2.73422449756797,0,0,1.71487118900936,1.53352753629178,2.75765635983006,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0,0,0,0,0,0,0.753926112677186,0,0,0.20778804455956,0,0,0.373220911830279,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0.420579897128254,0,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0.398282546508734,0,0.114248512609729,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491804836130026,0,0,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0.584511715822624,0,0,0.141940085208269,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887943813496259,1.79427713218951,0.671538465456314,0,0,0,0,0,0.564751842617067,0.920650473014354,0,0.515559547031063,0,0.755393897389701,0,0,0,0.51776031175182,0.207574695168353,0,0,0.729320151204882,0.209613162627982,0,0.888986911206461,0,0.320919209591815,0,0.50695859978048,0.377252682772152,0.37456602987953,0.256100609619477,0.516919220600519,0.952587382566147,0.695305955669133,0,0,0.588795680537589,1.02860775715625,0.354951612318675,1.1921809497366,0.145346416632329,0.376437521661322,0.338458431566706,0.73171189149109,0.263069711437843,0.407412341537585,0,0.593175090620871,0.197008964751127,0,0.154936841185966,0.385813221962283,0.749431733813838,0.467863216890817,0,0.382576664137687,0.441182838239031,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,5.08079100311541,5.13022565660425,2.73422449756797,0,0,1.71487118900936,1.53352753629178,2.75765635983006,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0,0,0,0,0,0,0.753926112677186,0,0,0.20778804455956,0,0,0.373220911830279,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0.420579897128254,0,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0.398282546508734,0,0.114248512609729,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491804836130026,0,0,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0.584511715822624,0,0,0.141940085208269,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887943813496259,1.79427713218951,0.671538465456314,0,0,0,0,0,0.564751842617067,0.920650473014354,0,0.515559547031063,0,0.755393897389701,0,0,0,0.51776031175182,0.207574695168353,0,0,0.729320151204882,0.209613162627982,0,0.888986911206461,0,0.320919209591815,0,0.50695859978048,0.377252682772152,0.37456602987953,0.256100609619477,0.516919220600519,0.952587382566147,0.695305955669133,0,0,0.588795680537589,1.02860775715625,0.354951612318675,1.1921809497366,0.145346416632329,0.376437521661322,0.338458431566706,0.73171189149109,0.263069711437843,0.407412341537585,0,0.593175090620871,0.197008964751127,0,0.154936841185966,0.385813221962283,0.749431733813838,0.467863216890817,0,0.382576664137687,0.441182838239031,0.463735671240843 | ||
|short_description=p11@Satb2 | |short_description=p11@Satb2 | ||
}} | }} |
Latest revision as of 05:50, 27 September 2015
Short description: | p11@Satb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Satb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | -4bp_to_NM_139146, uc007bas.1, uc011wlc.1_5end |
EntrezGene: | Satb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 1.09e-58 | 6 |
hippocampal neuron | 1.12e-29 | 3 |
CNS neuron (sensu Vertebrata) | 1.99e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.99e-15 | 23 |
neuron | 9.45e-11 | 33 |
neuronal stem cell | 9.45e-11 | 33 |
neuroblast | 9.45e-11 | 33 |
electrically signaling cell | 9.45e-11 | 33 |
electrically responsive cell | 4.36e-09 | 39 |
electrically active cell | 4.36e-09 | 39 |
neural cell | 3.12e-08 | 43 |
ectodermal cell | 4.83e-08 | 44 |
neurectodermal cell | 4.83e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 6.83e-17 | 21 |
cerebral hemisphere | 6.83e-17 | 21 |
pallium | 6.83e-17 | 21 |
Ammon's horn | 3.73e-13 | 7 |
lobe parts of cerebral cortex | 3.73e-13 | 7 |
hippocampal formation | 3.73e-13 | 7 |
limbic system | 3.73e-13 | 7 |
limbic lobe | 3.73e-13 | 7 |
brain grey matter | 3.08e-12 | 29 |
regional part of telencephalon | 3.08e-12 | 29 |
telencephalon | 3.08e-12 | 29 |
gray matter | 1.96e-10 | 34 |
regional part of forebrain | 4.36e-09 | 39 |
forebrain | 4.36e-09 | 39 |
future forebrain | 4.36e-09 | 39 |
anterior neural tube | 7.40e-09 | 40 |
regional part of brain | 1.09e-07 | 46 |
brain | 1.60e-07 | 47 |
future brain | 1.60e-07 | 47 |
pre-chordal neural plate | 3.29e-07 | 49 |
neural tube | 8.74e-07 | 52 |
neural rod | 8.74e-07 | 52 |
future spinal cord | 8.74e-07 | 52 |
neural keel | 8.74e-07 | 52 |