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FFCP PHASE1:Mm9::chr18:38578581..38578592,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=65113
|EntrezGene=65113
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q8R0W6
|UniProt=Q8R0W6
|association_with_transcript=-36bp_to_ENSMUST00000025293,NM_022996,uc008esj.1,uc008esk.1_5end
|association_with_transcript=-36bp_to_ENSMUST00000025293,NM_022996,uc008esj.1,uc008esk.1_5end
|cluster_id=chr18:38578581..38578592,+
|description=CAGE_peak_2_at_Ndfip1_5end
|description=CAGE_peak_2_at_Ndfip1_5end
|id=chr18:38578581..38578592,+
|id=chr18:38578581..38578592,+
|ontology_enrichment_celltype=CL:0000117!4.41e-11!23;CL:0000337!4.41e-11!23;CL:0000221!2.76e-08!44;CL:0000133!2.76e-08!44;CL:0002319!5.52e-08!43;CL:0000055!2.86e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,4.41e-11,23;CL:0000337,4.41e-11,23;CL:0000221,2.76e-08,44;CL:0000133,2.76e-08,44;CL:0002319,5.52e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.01e-18!75;UBERON:0001016!1.01e-18!75;UBERON:0001017!3.09e-18!73;UBERON:0005743!3.09e-18!73;UBERON:0001049!4.94e-18!52;UBERON:0005068!4.94e-18!52;UBERON:0006241!4.94e-18!52;UBERON:0007135!4.94e-18!52;UBERON:0000955!2.97e-17!50;UBERON:0006238!2.97e-17!50;UBERON:0000033!9.69e-17!63;UBERON:0002616!1.01e-16!49;UBERON:0004121!8.30e-16!102;UBERON:0000924!8.30e-16!102;UBERON:0006601!8.30e-16!102;UBERON:0002020!1.55e-15!34;UBERON:0002346!9.23e-15!71;UBERON:0003075!9.23e-15!71;UBERON:0007284!9.23e-15!71;UBERON:0002791!7.35e-13!29;UBERON:0003528!7.35e-13!29;UBERON:0001893!7.35e-13!29;UBERON:0003080!1.17e-12!40;UBERON:0002780!4.90e-12!39;UBERON:0001890!4.90e-12!39;UBERON:0006240!4.90e-12!39;UBERON:0003056!1.84e-11!49;UBERON:0004111!1.55e-10!122;UBERON:0000025!1.74e-09!114;UBERON:0000956!3.47e-08!21;UBERON:0001869!3.47e-08!21;UBERON:0000203!3.47e-08!21;UBERON:0002619!1.35e-07!17;UBERON:0007811!5.62e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.70e-19,54;UBERON:0001016,1.01e-18,75;UBERON:0001017,3.09e-18,73;UBERON:0001049,4.94e-18,52;UBERON:0005068,4.94e-18,52;UBERON:0006241,4.94e-18,52;UBERON:0007135,4.94e-18,52;UBERON:0004121,6.52e-16,95;UBERON:0000924,6.52e-16,95;UBERON:0006601,6.52e-16,95;UBERON:0002020,1.55e-15,34;UBERON:0000955,2.94e-15,47;UBERON:0006238,2.94e-15,47;UBERON:0002346,3.17e-15,64;UBERON:0003075,3.17e-15,64;UBERON:0007284,3.17e-15,64;UBERON:0002616,9.58e-15,46;UBERON:0003528,7.35e-13,29;UBERON:0002791,7.35e-13,29;UBERON:0001893,7.35e-13,29;UBERON:0010371,1.09e-12,73;UBERON:0003080,1.17e-12,40;UBERON:0010314,2.65e-12,92;UBERON:0002780,4.90e-12,39;UBERON:0001890,4.90e-12,39;UBERON:0006240,4.90e-12,39;UBERON:0003056,1.84e-11,49;UBERON:0004111,1.55e-10,122;UBERON:0000025,1.74e-09,114;UBERON:0000956,3.47e-08,21;UBERON:0001869,3.47e-08,21;UBERON:0000203,3.47e-08,21;UBERON:0002619,1.35e-07,17
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695253534,6.11415178489297,7.28267470478032,9.33984049696296,13.6113089831695,17.8868663142674,18.0188400795208,7.89170114157866,7.7748603942869,8.93475848468327,8.16694991045,11.3660644660403,10.9821481569006,10.7968659554094,10.8069639420479,8.91304427618542,7.73069186643219,8.64090018773596,5.05617793005085,6.08175645870493,4.93012594391171,3.63778304337826,3.75956060901711,3.9736270956253,4.92801343031872,4.13530676088816,3.73575864808146,4.26758117267999,3.93222122033678,4.28814675254911,3.84847366561318,5.37633750035217,11.1097887971454,5.77163478772568,4.12683740403588,4.36500002546604,9.07991091951295,10.322536149815,7.69236821922513,7.07415650960917,18.5581678493084,23.7195773899168,20.2543104063158,25.2074025913335,32.480251462957,31.5137959094495,20.3956352295219,22.2757425076496,29.2708782095743,29.9073989929575,27.9590568345983,3.94391920819871,7.18244772121856,5.29274177837816,7.29320151204882,6.28839487883947,4.77993121970037,6.22290837844523,5.35691148821125,7.38114182061175,7.32821914115013,6.59046179714623,8.86543804514558,8.70866019469906,8.77144587946709,8.90249768812006,9.52587382566147,9.15486174964358,8.68091492086673,8.65380391686944,8.68473628792944,5.14303878578123,7.63145966485151,10.9680647375768,8.86613141457204,8.37573485696442,8.96914843651771,9.87811053512972,9.73357932320019,9.91370031074791,1.68342681497322,8.18581625056802,9.1609168609274,8.59385190656348,13.1696315008071,11.5743966588685,11.4912865851455,8.4215379040347,9.23945532407683,7.84282161482258,9.9266138603782,7.65163857547391
|phase1_expression=12.9720566154883,10.8182376368202,24.1149596876454,13.6108895088074,17.5313505481222,7.89032577985882,9.57811826441655,15.6239221364307,32.8037722613384,43.5360018958908,21.0598100917371,16.831925548016,7.53283211697305,10.4030278878607,3.99731714178795,5.87178275430495,9.09430441566591,9.14840279538889,6.85572168028694,2.97072756258621,13.1817099734158,5.56029326724958,5.74639536105658,11.9994317095055,17.8939239232393,21.2465826722557,17.6612418425221,16.5912849168135,23.7529274320467,26.4631636247927,15.9645967671819,1.90509202037889,2.46025915033828,0,7.22129049378186,7.97926297720763,6.12508068787107,25.5304294749514,18.7520482685712,18.3233310390829,27.6468799374577,23.2235464885872,32.0436833000561,8.05739635043695,8.61703915365874,10.0950713688925,10.9534788208725,14.8257106338704,12.0827400503959,15.9432517240912,11.0589273084036,18.6878333674463,10.9058693937529,8.70434570413613,8.06625117941913,8.48956138918625,6.87680255853016,11.3447860301037,23.8733423814325,22.7466121086974,25.9870875437533,6.77689064138264,11.5608323494448,12.1486461832989,20.7661936139065,12.7886420690298,15.8788058574755,12.6792040756113,11.4058573539325,14.1756235248275,11.9885227970288,26.5655415495537,27.6085676189517,15.0663683034393,13.7059023556078,16.5459381589804,41.8440347797677,38.3062014255563,36.0975353152172,22.0250100509424,32.9355516968675,26.045668527838,42.4358158482099,45.0210088025344,38.657956687533,26.2219441071564,28.4743361598206,23.2999307281626,14.6151553133045,15.0387404612503,11.5945795480671,30.1148356943485,16.9992833426938,31.8424883066312,21.4426217757731,25.5375325645481,14.7466641138339,8.01022516116871,9.35229616570328,7.0667914902068,18.1688011511918,2.56652954828636,0,0,12.123498296628,10.1343946190039,11.62706223534,19.6396273116783,5.69663344023778,17.0708459924548,7.63335437770998,7.00270600117925,9.91646638201052,13.4143150091834,9.17191915658498,16.0853236901985,11.6181634835156,5.35017620603673,6.19227386364912,8.7354098971601,3.75430581382669,3.87900202508178,16.775258509631,24.59358694897,19.2690970268379,16.3492515333498,6.58983184782562,11.3981518888747,6.09937089950711,36.2493347359671,35.6850470198529,28.0209205211688,31.9836749153789,25.3158302757027,35.7395436642443,27.0942909323155,10.5912938404329,10.698999472468,16.1742565397552,14.7309299120532,6.24578126220978,9.65588838620586,6.84236093260327,9.79581315932148,12.3146063463903,10.6334387836425,13.9615569593996,12.4177617954728,3.88022387279116,5.29497024469894,4.75068035242662,6.57587197282724,5.83899223373756,6.96504333044333,7.81972118350185,8.7575077400137,7.02213187313235,4.11756651383544,5.39910648851626,6.83515049367156,5.8631514995274,9.36322719597277,7.81257627431194,6.29645541591692,9.56456099901745,7.67362017676346,8.58474884478781,8.99093136227205,11.0255099442032,11.4917224855367,11.9171150032408,15.9357986293612,8.78200461164202,12.6154033634749,20.1878350621562,19.9634948015812,24.1205711578173,8.99131926656051,4.26576501070468,3.94802342162745,4.89696353023955,5.84882221407693,5.11469500843202,9.51128130562796,14.7104009078799,9.71723832871664,11.0587491872119,12.5342577385925,14.622306533934,8.08937467788799,13.400559092231,16.7278669533668,5.87970492954553,6.740662243974,4.50830942692322,8.14605311381257,8.92181440971078,10.3801013437671,12.5208343506029,19.6321496812871,18.839847340965,16.5352199655213,26.9771890649305,3.17005700860579,5.11053387294328,3.14806957338795,3.85434230638156,7.23531479257251,5.60176873919124,7.48009957372108,9.72811360650212,12.6298250066517,11.5014565221884,16.7463426450827,19.0342980599882,15.4073115547738,12.3784215330119,22.1924019827149,12.3784637411625,4.73728529426212,3.7481944581666,5.60158783058121,4.22442446919304,5.52770649557992,6.18913466303636,11.9031525193257,8.35466263762812,9.08005227559977,8.13219320153184,7.86543910635542,11.7425787668809,13.018415272336,7.53956419696361,6.52686820582452,7.86822836830458,9.93372286697037,25.6880943980467,33.0536956190013,5.73772308818364,13.3809591418318,7.2566890465739,7.02789739733949,8.61693590931196,5.4962823529087,7.35235624471901,7.07691326972081,6.47697122679831,9.9366991689846,9.09161889277004,25.7057053137446,8.37446502728785,7.47875535402472,10.4247653986289,7.4236555337641,9.2921596837974,5.09839335925461,9.06970670894253,8.29862350925952,5.02013217897314,11.0676653259814,10.0787034335606,12.7236805317127,11.0514187299264,11.6933600436252,12.6502330289999,17.5330423521918,13.6175842301515,4.14140516272013,7.1147276080515,9.85950361145325,7.80297028026004,14.8046118609719,14.4803138129866,14.6143175575008,6.33613611772018,10.8034356140548,17.8628002424519,4.61681508236144,9.36493674836252,6.81536051688161,7.16234064018819,4.92422699235184,11.9507143018239,28.1846459055975,3.93003025835061,5.36605856704379,3.88908507476395,4.70921142511728,3.96413260390973,5.0331198105435,6.96911562974807,10.0765045673034,7.73919853304773,4.77335309007557,5.3777118908793,7.5228202836934,6.04829908602087,7.73626695253534,6.11415178489297,7.28267470478032,9.33984049696296,13.6113089831695,17.8868663142674,18.0188400795208,7.89170114157866,7.7748603942869,8.93475848468327,8.16694991045,11.3660644660403,10.9821481569006,10.7968659554094,10.8069639420479,8.91304427618542,7.73069186643219,8.64090018773596,5.05617793005085,6.08175645870493,4.93012594391171,3.63778304337826,3.75956060901711,3.9736270956253,4.92801343031872,4.13530676088816,3.73575864808146,4.26758117267999,3.93222122033678,4.28814675254911,3.84847366561318,5.37633750035217,11.1097887971454,5.77163478772568,4.12683740403588,4.36500002546604,9.07991091951295,10.322536149815,7.69236821922513,7.07415650960917,18.5581678493084,23.7195773899168,20.2543104063158,25.2074025913335,32.480251462957,31.5137959094495,20.3956352295219,22.2757425076496,29.2708782095743,29.9073989929575,27.9590568345983,3.94391920819871,7.18244772121856,5.29274177837816,7.29320151204882,6.28839487883947,4.77993121970037,6.22290837844523,5.35691148821125,7.38114182061175,7.32821914115013,6.59046179714623,8.86543804514558,8.70866019469906,8.77144587946709,8.90249768812006,9.52587382566147,9.15486174964358,8.68091492086673,8.65380391686944,8.68473628792944,5.14303878578123,7.63145966485151,10.9680647375768,8.86613141457204,8.37573485696442,8.96914843651771,9.87811053512972,9.73357932320019,9.91370031074791,1.68342681497322,8.18581625056802,9.1609168609274,8.59385190656348,13.1696315008071,11.5743966588685,11.4912865851455,8.4215379040347,9.23945532407683,7.84282161482258,9.9266138603782,7.65163857547391
|short_description=p2@Ndfip1
|short_description=p2@Ndfip1
}}
}}

Latest revision as of 06:20, 27 September 2015

Short description:p2@Ndfip1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ndfip1_5end
Coexpression cluster:NA
Association with transcript: -36bp_to_ENSMUST00000025293, NM_022996, uc008esj.1, uc008esk.1_5end
EntrezGene:Ndfip1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ndfip1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.97
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I510.82
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I624.11
CD326+ enterocyte, pool1.CNhs13542.11848-124I313.61
CD326+ enterocyte, pool2.CNhs13197.11849-124I417.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.89
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I89.58
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E915.62
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E732.80
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F243.54
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E621.06
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F116.83
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.53
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E810.40
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.87
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.09
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A29.15
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.86
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.56
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.75
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D112.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D217.89
GP2+ M cell, pool1.CNhs13228.11845-124H921.25
GP2+ M cell, pool2.CNhs13231.11846-124I117.66
GP2+ M cell, pool3.CNhs13240.11847-124I216.59
Ileum epithelium, pool1.CNhs13199.10252-104B923.75
Ileum epithelium, pool2.CNhs13232.10253-104C126.46
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C815.96
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.22
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.98
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G825.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H118.75
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H318.32
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G927.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H223.22
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H432.04
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D88.06
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.62
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B310.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C214.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B812.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C315.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C411.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C418.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A210.91
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I98.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A18.07
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C18.49
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.88
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C511.34
Mouse Granule cells, donor1.CNhs12131.11713-123C323.87
Mouse Granule cells, donor2.CNhs12357.11731-123E322.75
Mouse Granule cells, donor3.CNhs12108.11636-122C725.99
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.78
Mouse Meningeal cells, donor3.CNhs12109.11639-122D111.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C712.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E720.77
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D212.79
Mouse Microglia, donor1.CNhs12629.11718-123C815.88
Mouse Microglia, donor2.CNhs12634.11736-123E812.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D511.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.18
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.99
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F126.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D527.61
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D215.07
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F213.71
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D616.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D341.84
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F338.31
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D736.10
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D422.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F432.94
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D826.05
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E442.44
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E545.02
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I638.66
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D626.22
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F628.47
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E123.30
Mouse Schwann, donor1.CNhs12507.11728-123D914.62
Mouse Schwann, donor2.CNhs12573.11746-123F915.04
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.59
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F730.11
Mouse hepatocyte, donor1.CNhs13078.11714-123C417.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C831.84
Mouse hepatocyte, donor6.CNhs13090.11822-124F421.44
Mouse hepatocyte, donor8.CNhs13091.11824-124F625.54
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A714.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.07
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G618.17
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G112.12
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G210.13
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G311.63
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B619.64
accessory axillary lymph node, adult.CNhs10475.1063-29H95.70
adrenal gland, adult.CNhs10508.49-24D717.07
adrenal gland, embryo E14.CNhs11038.406-44C57.63
adrenal gland, embryo E16.CNhs11004.1254-43D67.00
adrenal gland, embryo E17.CNhs11043.1263-45I19.92
adrenal gland, embryo E18.CNhs11026.1262-18F513.41
adrenal gland, neonate N00.CNhs11191.1311-23C19.17
adrenal gland, neonate N25.CNhs11223.1377-27I316.09
amnion, adult pregnant day17.5.CNhs10488.583-22A811.62
aorta, adult.CNhs10498.46-23H15.35
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F58.74
bone (os femoris), neonate N16.CNhs11225.1525-43A63.75
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B224.59
cerebellum, neonate N30.CNhs11135.1395-42I219.27
colon, adult.CNhs10468.36-18H716.35
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C76.59
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D111.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.10
corpora quadrigemina, adult.CNhs10501.16-22A436.25
corpus striatum, adult.CNhs10487.19-21D835.69
corpus striatum, neonate N00.CNhs11226.630-43F128.02
cortex, adult.CNhs10473.12-14D531.98
cortex, neonate N30.CNhs11107.1392-42F225.32
diencephalon, adult.CNhs10482.20-12F235.74
diencephalon, neonate N30.CNhs11201.1388-42B227.09
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B110.59
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A210.70
epididymis, adult.CNhs10490.58-23B216.17
eyeball, adult.CNhs10484.31-12G414.73
eyeball, embryo E12.CNhs11016.345-16C66.25
eyeball, embryo E14.CNhs10521.399-16E29.66
eyeball, embryo E15.CNhs10593.426-16C96.84
eyeball, embryo E17.CNhs11023.1261-18D49.80
eyeball, neonate N00.CNhs11207.633-15C612.31
eyeball, neonate N01.CNhs11140.1532-43E710.63
eyeball, neonate N02.CNhs11205.1551-44G813.96
eyeball, neonate N16.CNhs11188.777-19A212.42
forelimb, embryo E11.CNhs10596.335-25E23.88
forelimb, embryo E12.CNhs10600.359-14H25.29
forelimb, embryo E13.CNhs10589.384-1E24.75
forelimb, embryo E14.CNhs10577.413-26A86.58
forelimb, embryo E15.CNhs11007.437-20E75.84
forelimb, embryo E17.CNhs10598.1517-43C46.97
forelimb, embryo E18.CNhs11008.1520-43B57.82
gonad, embryo E13.CNhs11044.1564-45I68.76
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.02
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.12
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.40
heart, embryo E11.CNhs10586.331-24E96.84
heart, embryo E12.CNhs11015.353-12F55.86
heart, embryo E13.CNhs11013.376-3I99.36
heart, embryo E14.CNhs10597.403-26D47.81
heart, embryo E15.CNhs11017.431-16C86.30
heart, embryo E16.CNhs11021.457-17C69.56
heart, embryo E17.CNhs11025.479-18E57.67
heart, embryo E18.CNhs11030.1283-20G38.58
heart, neonate N00.CNhs11213.639-21E38.99
heart, neonate N03.CNhs11221.1349-25I211.03
heart, neonate N10.CNhs11118.749-24G111.49
heart, neonate N16.CNhs11209.782-15G111.92
heart, neonate N20.CNhs11127.821-26I615.94
heart, neonate N25.CNhs11196.1351-25D38.78
heart, neonate N30.CNhs11202.1390-42D212.62
hippocampus, adult.CNhs10478.13-16E820.19
hippocampus, neonate N00.CNhs11228.627-43G119.96
intestinal mucosa, adult.CNhs10506.860-29I324.12
intestine, adult.CNhs10496.178-9A38.99
intestine, embryo E12.CNhs11019.1251-16I54.27
intestine, embryo E13.CNhs11010.381-16D53.95
intestine, embryo E15.CNhs10602.976-16D84.90
intestine, embryo E16.CNhs10585.463-22H45.85
intestine, embryo E17.CNhs10582.482-18D35.11
intestine, embryo E18.CNhs10526.1289-20F79.51
intestine, neonate N00.CNhs11126.644-26D114.71
intestine, neonate N01.CNhs11192.1322-23E99.72
intestine, neonate N06.CNhs11102.688-20B811.06
intestine, neonate N07.CNhs11095.720-20F212.53
intestine, neonate N10.CNhs11098.755-23A514.62
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E313.40
intestine, neonate N30.CNhs11131.1384-42G116.73
kidney, embryo E14.CNhs10606.411-4I95.88
kidney, embryo E15.CNhs10997.434-16F86.74
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I28.15
kidney, embryo E18.CNhs11001.1288-20C78.92
kidney, neonate N00.CNhs11214.646-21G710.38
kidney, neonate N10.CNhs11206.758-6D512.52
kidney, neonate N20.CNhs11113.832-19I119.63
kidney, neonate N25.CNhs11122.1353-25F318.84
kidney, neonate N30.CNhs11203.1385-42H116.54
liver, adult pregnant day01.CNhs10466.508-5B226.98
liver, embryo E12.CNhs10601.355-15F83.17
liver, embryo E13.CNhs10524.378-3H65.11
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D73.85
liver, embryo E16.CNhs10523.462-17F57.24
liver, embryo E17.CNhs10510.481-18A35.60
liver, embryo E18.CNhs10579.499-43G47.48
liver, neonate N00.CNhs11117.641-24F49.73
liver, neonate N03.CNhs11123.1345-25G212.63
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H216.75
liver, neonate N10.CNhs11115.751-24B919.03
liver, neonate N20.CNhs11220.823-25A315.41
liver, neonate N25.CNhs11198.1368-26H112.38
liver, neonate N30.CNhs11106.1382-42D122.19
lung, adult.CNhs10474.28-22B112.38
lung, embryo E12.CNhs10522.354-16G24.74
lung, embryo E14.CNhs10604.404-26F83.75
lung, embryo E15.CNhs11020.432-17C55.60
lung, embryo E16.CNhs10998.458-17B64.22
lung, embryo E17.CNhs10605.480-44A65.53
lung, embryo E18.CNhs10583.1287-20I66.19
lung, neonate N00.CNhs11224.640-42C611.90
lung, neonate N06.CNhs11212.683-20E58.35
lung, neonate N07.CNhs11111.715-19A39.08
lung, neonate N10.CNhs11219.750-23E68.13
lung, neonate N20.CNhs11109.822-18A47.87
lung, neonate N25.CNhs11119.1359-25C711.74
lung, neonate N30.CNhs11133.1394-42H213.02
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A16.53
mammary gland, adult lactating day02.CNhs10480.595-22B67.87
mammary gland, adult pregnant day19.CNhs10476.588-5H29.93
medulla oblongata, adult.CNhs10477.17-12C225.69
medulla oblongata, neonate N30.CNhs11200.1396-42A333.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.74
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C213.38
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.03
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E38.62
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.50
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.35
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.08
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.94
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.09
olfactory brain, adult.CNhs10489.18-22I925.71
ovary, adult.CNhs10507.91-2I78.37
ovary, embryo E18.CNhs11040.505-44H77.48
ovary, neonate N00.CNhs11217.1299-22I410.42
oviduct, adult pregnant day01.CNhs10500.988-6G67.42
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F45.10
pancreas, embryo E15.CNhs11042.1556-45F29.07
pancreas, embryo E16.CNhs11003.460-26E58.30
pancreas, embryo E17.CNhs10599.1558-45G35.02
pancreas, embryo E18.CNhs10580.1535-43I711.07
pancreas, neonate N00.CNhs11105.645-26G910.08
pancreas, neonate N01.CNhs11138.1531-43D712.72
pancreas, neonate N02.CNhs11139.1539-43D811.05
pancreas, neonate N16.CNhs11136.787-43B611.69
pancreas, neonate N25.CNhs11094.1555-45E212.65
pancreas, neonate N30.CNhs11182.1548-44H517.53
pituitary gland, adult.CNhs10493.21-1G813.62
pituitary gland, embryo E12.CNhs11018.346-16E64.14
pituitary gland, embryo E13.CNhs11009.370-44C77.11
pituitary gland, embryo E14.CNhs11037.398-44A59.86
pituitary gland, embryo E15.CNhs10592.427-16B97.80
pituitary gland, embryo E16.CNhs11036.449-43F614.80
pituitary gland, embryo E17.CNhs11039.1265-44F514.48
pituitary gland, neonate N00.CNhs11190.1308-22E914.61
placenta, adult pregnant day10.CNhs10472.539-13I76.34
placenta, adult pregnant day17.CNhs10464.577-18G310.80
prostate, adult.CNhs10470.859-1F817.86
skin, adult.CNhs10492.30-1C34.62
skin, neonate N00.CNhs11124.650-25G49.36
skin, neonate N03.CNhs11215.662-22H36.82
skin, neonate N06.CNhs11097.693-20I57.16
skin, neonate N10.CNhs11108.762-6C44.92
small intestine, neonate N16.CNhs11114.790-21I111.95
spinal cord, adult.CNhs10505.24-13C928.18
spleen, adult.CNhs10465.25-2G23.93
spleen, embryo E16.CNhs11035.461-43C15.37
spleen, embryo E18.CNhs11011.1271-21F23.89
spleen, neonate N10.CNhs11116.752-24D14.71
spleen, neonate N20.CNhs11112.824-19H13.96
spleen, neonate N25.CNhs11099.1354-25G35.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.74
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E35.38
stomach, embryo E15.CNhs10603.1252-16G87.52
stomach, embryo E16.CNhs11022.459-17D46.05
stomach, embryo E17.CNhs11006.1035-18D57.74
stomach, embryo E18.CNhs10999.1286-20C66.11
stomach, neonate N03.CNhs11193.1340-24B87.28
stomach, neonate N07.CNhs11210.718-18A99.34
stomach, neonate N25.CNhs11104.1355-25E413.61
stomach, neonate N30.CNhs11134.1386-42I117.89
submandibular gland, adult.CNhs10469.59-29C118.02
testis, adult.CNhs10504.57-7G57.89
testis, embryo E13.CNhs11031.389-23F57.77
testis, embryo E15.CNhs11034.443-27C58.93
testis, embryo E16.CNhs11033.470-26G58.17
testis, embryo E17.CNhs11029.486-18I511.37
testis, embryo E18.CNhs11027.503-18G510.98
testis, neonate N00.CNhs11189.1300-22B710.80
testis, neonate N07.CNhs11222.726-26I410.81
testis, neonate N10.CNhs11204.763-44D98.91
testis, neonate N20.CNhs11110.839-18H37.73
testis, neonate N30.CNhs11130.1391-42E28.64
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I46.08
thymus, embryo E15.CNhs11005.430-45I24.93
thymus, embryo E16.CNhs11002.456-26C53.64
thymus, embryo E17.CNhs10581.478-18C13.76
thymus, embryo E18.CNhs10595.1273-19G43.97
thymus, neonate N02.CNhs11181.1541-43F84.93
thymus, neonate N03.CNhs11137.2104-43C74.14
thymus, neonate N06.CNhs11197.681-26C43.74
thymus, neonate N07.CNhs11211.713-19D34.27
thymus, neonate N10.CNhs11194.748-24E43.93
thymus, neonate N20.CNhs11186.820-7A24.29
thymus, neonate N25.CNhs11125.1362-25G73.85
thymus, neonate N30.CNhs11132.1393-42G25.38
tongue, adult.CNhs10499.32-1B411.11
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.13
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.37
urinary bladder, adult.CNhs10481.879-12E49.08
uterus, adult pregnant day19.CNhs10497.590-15F510.32
uterus, adult.CNhs10509.92-27E57.69
vagina, adult.CNhs10502.89-27D57.07
vesicular gland, adult.CNhs10491.51-27F818.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A123.72
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A220.25
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A325.21
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D732.48
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A431.51
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A520.40
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A622.28
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A729.27
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A829.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A927.96
whole body, embryo E11.CNhs11014.324-5I83.94
whole body, embryo E12.CNhs10587.857-27C97.18
whole body, embryo E13.CNhs10512.372-23H25.29
whole body, embryo E14.5.CNhs10578.420-27D27.29
whole body, embryo E14.CNhs10519.395-14B16.29
whole body, embryo E16.CNhs10514.453-14F24.78
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.71
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.90
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G59.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.15
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.97
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.88
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.91
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.16
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.59
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G513.17
whole body, embryo E17.5.CNhs10513.490-9F911.57
whole body, embryo E17.CNhs10517.475-3I511.49
whole body, embryo E18.CNhs10516.493-3B38.42
whole body, neonate N00.CNhs10525.657-19C29.24
whole body, neonate N01.CNhs10576.659-23C67.84
whole body, neonate N06.CNhs10515.692-21D19.93
whole body, neonate N10.CNhs10518.761-6B47.65





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.41e-1123
neuroblast (sensu Vertebrata)4.41e-1123
ectodermal cell2.76e-0844
neurectodermal cell2.76e-0844
neural cell5.52e-0843

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.70e-1954
nervous system1.01e-1875
central nervous system3.09e-1873
neural tube4.94e-1852
neural rod4.94e-1852
future spinal cord4.94e-1852
neural keel4.94e-1852
ectoderm-derived structure6.52e-1695
ectoderm6.52e-1695
presumptive ectoderm6.52e-1695
gray matter1.55e-1534
brain2.94e-1547
future brain2.94e-1547
neurectoderm3.17e-1564
neural plate3.17e-1564
presumptive neural plate3.17e-1564
regional part of brain9.58e-1546
brain grey matter7.35e-1329
regional part of telencephalon7.35e-1329
telencephalon7.35e-1329
ecto-epithelium1.09e-1273
anterior neural tube1.17e-1240
structure with developmental contribution from neural crest2.65e-1292
regional part of forebrain4.90e-1239
forebrain4.90e-1239
future forebrain4.90e-1239
pre-chordal neural plate1.84e-1149
anatomical conduit1.55e-10122
tube1.74e-09114
cerebral cortex3.47e-0821
cerebral hemisphere3.47e-0821
pallium3.47e-0821
regional part of cerebral cortex1.35e-0717
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