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FFCP PHASE1:Mm9::chr9:98197009..98197066,+: Difference between revisions

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{{FFCP|EntrezGene=74080|HGNC=|UniProt=Q3V3F1|association_with_transcript=0bp_to_ENSMUST00000112938,ENSMUST00000141427,uc009rdi.1_5end|description=CAGE_peak_1_at_Nmnat3_5end|id=chr9:98197009..98197066,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!6.77e-11!49;UBERON:0005173!6.77e-11!49;UBERON:0002417!6.77e-11!49;UBERON:0000916!6.77e-11!49;UBERON:0001007!1.27e-09!128;UBERON:0001555!1.27e-09!128;UBERON:0007026!1.27e-09!128;UBERON:0004921!2.15e-09!126;UBERON:0004185!2.15e-09!126;UBERON:0004119!2.30e-09!130;UBERON:0000925!2.30e-09!130;UBERON:0006595!2.30e-09!130;UBERON:0005409!2.40e-09!59;UBERON:0000160!1.86e-08!43;UBERON:0000926!3.00e-07!193;UBERON:0004120!3.00e-07!193;UBERON:0006603!3.00e-07!193;UBERON:0002405!3.12e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0005172,5.60e-11,49;UBERON:0005173,5.60e-11,49;UBERON:0002417,5.60e-11,49;UBERON:0000916,5.60e-11,49;UBERON:0005409,2.76e-10,47;UBERON:0000160,5.16e-10,31;UBERON:0001007,1.05e-09,116;UBERON:0001555,1.05e-09,116;UBERON:0007026,1.05e-09,116;UBERON:0004921,1.75e-09,114;UBERON:0004119,2.00e-09,118;UBERON:0000925,2.00e-09,118;UBERON:0006595,2.00e-09,118|phase1_expression=0.480446541314382,6.2815573375085,7.73498706962211,11.7961042409664,14.5259761684441,6.88305014838748,5.60670337429262,1.16210991097419,3.94208422024667,1.87251621057595,7.87602653837323,3.27065851880879,4.28001824828014,0.961624426608971,16.3223783289675,13.970793449898,25.8837894907414,5.20512572841092,7.95263714913285,4.2438965179803,2.72138528483423,7.64540324246817,4.17919662622297,4.63978026100879,4.81759490241057,6.89078356938024,8.18447792702242,7.11055067863434,3.23039813075836,4.28451220591882,3.32595765982957,15.2407361630311,15.3766196896143,31.6963362030877,11.554064790051,8.31173226792462,12.4543307320045,0.418531630736908,0.7813353445238,0.523523743973798,0.588231488031014,0.683045484958446,1.45653105909346,1.76255545165808,0.912392380975631,0.734187008646726,0,0.65407546914134,0.878744730937887,0.972149495371417,0.699932108126813,2.87505128729943,2.51673909086605,2.90144856804538,3.02484419228218,3.08711323243136,1.14613375975503,1.03134418455488,0,0.528990979272033,0,0.338844532069132,1.77858959222228,8.99899717281399,6.92206453796882,2.1314403448383,1.19840044207362,1.15265491596466,0.207379224616955,0.135005938331691,0,0,0.441737081903227,0.244981598429908,0.383381884072945,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0.0914876436024097,0,0.558365998002762,0.56276261003168,0.61119299110724,0,0,0,0.151452386666368,0.0755715601067855,4.63783181922684,6.0229671388697,3.39985666853875,3.77792234146472,6.49776417447669,4.92829575807069,2.80888840263504,0,0,0,1.40843419776681,0,0,0,2.38140145112336,1.77351905832569,2.52762222507392,3.31133251185274,6.21450920753212,7.42210695324124,4.51061849591953,3.34912026143355,5.07354093963329,6.17962826265753,8.93674174231356,5.15233024451669,3.21353458054686,7.51916655983541,4.42305275974937,6.79420769779119,10.3795513676385,9.69750506270444,5.59175283654366,1.17112318804619,0.209446706813455,8.68553987709211,9.94465533399138,6.59893004092748,9.53026703047985,1.49790639404823,0.457500602818626,0.753926112677186,0.869121600961382,0.767146371990992,0.62336413367868,1.1356888414743,2.13862664085664,6.96679035416521,9.09801930361229,5.47148825304832,3.25301107406759,2.75882525320168,1.80062129805349,1.65775299619287,2.85753296435577,1.66547836370305,3.18585863503078,3.3631438196072,1.07783996466421,0.378212160335639,0.879755620819744,1.31517439456545,1.39023624612799,1.0447564995665,2.88094990971121,3.78165106955137,7.72434506044558,5.91900186363845,8.24074148247219,3.52113813310353,2.57978665979206,2.34080679899319,2.60419209143731,4.9191057936851,2.77680803197281,5.8133486187602,2.95100741539581,6.07179780309281,7.24063339619314,7.38753588355929,7.53939928776458,6.87139940899062,5.04965265169416,7.1129401942997,0.630869845692382,0.411618449517138,20.4859645449955,3.96675849995316,2.34617075588757,2.55460339046482,3.35055399437443,7.46229041106367,9.56225588532942,9.70150693174052,7.59246498471219,9.55253937399263,14.3261069016154,18.502951899827,16.182019230887,17.0775687644302,10.3746263939853,15.1347367673319,2.84501851429623,2.97046132785295,2.25415471346161,4.07302655690629,6.7883370508669,6.87331034925122,8.91635173452028,10.775540802511,7.22194148070324,10.1185674415876,2.37162101669719,9.51017102581736,11.0073037263394,14.1663130802458,14.6059287399722,9.64708639009667,11.2035374783825,9.78166867332756,8.59316701907687,6.04035109013779,10.0637744569148,5.95425516269605,6.55279113540577,5.05157755894223,4.12614051100398,5.78932225636041,3.69506380333209,2.27389694124582,1.62964976442026,1.86719594352707,1.40814148973101,2.34508760418542,2.14239276797412,2.92700471786698,2.67979744980525,2.87904096543407,2.55127629851979,4.09658286789345,1.72684981865896,4.05017364028232,1.50791283939272,3.80733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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=74080
|HGNC=
|TSSclassifier=NA
|UniProt=Q3V3F1
|association_with_transcript=0bp_to_ENSMUST00000112938,ENSMUST00000141427,uc009rdi.1_5end
|cluster_id=chr9:98197009..98197066,+
|description=CAGE_peak_1_at_Nmnat3_5end
|id=chr9:98197009..98197066,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0005172,5.60e-11,49;UBERON:0005173,5.60e-11,49;UBERON:0002417,5.60e-11,49;UBERON:0000916,5.60e-11,49;UBERON:0005409,2.76e-10,47;UBERON:0000160,5.16e-10,31;UBERON:0001007,1.05e-09,116;UBERON:0001555,1.05e-09,116;UBERON:0007026,1.05e-09,116;UBERON:0004921,1.75e-09,114;UBERON:0004119,2.00e-09,118;UBERON:0000925,2.00e-09,118;UBERON:0006595,2.00e-09,118
|phase1_expression=0.480446541314382,6.2815573375085,7.73498706962211,11.7961042409664,14.5259761684441,6.88305014838748,5.60670337429262,1.16210991097419,3.94208422024667,1.87251621057595,7.87602653837323,3.27065851880879,4.28001824828014,0.961624426608971,16.3223783289675,13.970793449898,25.8837894907414,5.20512572841092,7.95263714913285,4.2438965179803,2.72138528483423,7.64540324246817,4.17919662622297,4.63978026100879,4.81759490241057,6.89078356938024,8.18447792702242,7.11055067863434,3.23039813075836,4.28451220591882,3.32595765982957,15.2407361630311,15.3766196896143,31.6963362030877,11.554064790051,8.31173226792462,12.4543307320045,0.418531630736908,0.7813353445238,0.523523743973798,0.588231488031014,0.683045484958446,1.45653105909346,1.76255545165808,0.912392380975631,0.734187008646726,0,0.65407546914134,0.878744730937887,0.972149495371417,0.699932108126813,2.87505128729943,2.51673909086605,2.90144856804538,3.02484419228218,3.08711323243136,1.14613375975503,1.03134418455488,0,0.528990979272033,0,0.338844532069132,1.77858959222228,8.99899717281399,6.92206453796882,2.1314403448383,1.19840044207362,1.15265491596466,0.207379224616955,0.135005938331691,0,0,0.441737081903227,0.244981598429908,0.383381884072945,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0.0914876436024097,0,0.558365998002762,0.56276261003168,0.61119299110724,0,0,0,0.151452386666368,0.0755715601067855,4.63783181922684,6.0229671388697,3.39985666853875,3.77792234146472,6.49776417447669,4.92829575807069,2.80888840263504,0,0,0,1.40843419776681,0,0,0,2.38140145112336,1.77351905832569,2.52762222507392,3.31133251185274,6.21450920753212,7.42210695324124,4.51061849591953,3.34912026143355,5.07354093963329,6.17962826265753,8.93674174231356,5.15233024451669,3.21353458054686,7.51916655983541,4.42305275974937,6.79420769779119,10.3795513676385,9.69750506270444,5.59175283654366,1.17112318804619,0.209446706813455,8.68553987709211,9.94465533399138,6.59893004092748,9.53026703047985,1.49790639404823,0.457500602818626,0.753926112677186,0.869121600961382,0.767146371990992,0.62336413367868,1.1356888414743,2.13862664085664,6.96679035416521,9.09801930361229,5.47148825304832,3.25301107406759,2.75882525320168,1.80062129805349,1.65775299619287,2.85753296435577,1.66547836370305,3.18585863503078,3.3631438196072,1.07783996466421,0.378212160335639,0.879755620819744,1.31517439456545,1.39023624612799,1.0447564995665,2.88094990971121,3.78165106955137,7.72434506044558,5.91900186363845,8.24074148247219,3.52113813310353,2.57978665979206,2.34080679899319,2.60419209143731,4.9191057936851,2.77680803197281,5.8133486187602,2.95100741539581,6.07179780309281,7.24063339619314,7.38753588355929,7.53939928776458,6.87139940899062,5.04965265169416,7.1129401942997,0.630869845692382,0.411618449517138,20.4859645449955,3.96675849995316,2.34617075588757,2.55460339046482,3.35055399437443,7.46229041106367,9.56225588532942,9.70150693174052,7.59246498471219,9.55253937399263,14.3261069016154,18.502951899827,16.182019230887,17.0775687644302,10.3746263939853,15.1347367673319,2.84501851429623,2.97046132785295,2.25415471346161,4.07302655690629,6.7883370508669,6.87331034925122,8.91635173452028,10.775540802511,7.22194148070324,10.1185674415876,2.37162101669719,9.51017102581736,11.0073037263394,14.1663130802458,14.6059287399722,9.64708639009667,11.2035374783825,9.78166867332756,8.59316701907687,6.04035109013779,10.0637744569148,5.95425516269605,6.55279113540577,5.05157755894223,4.12614051100398,5.78932225636041,3.69506380333209,2.27389694124582,1.62964976442026,1.86719594352707,1.40814148973101,2.34508760418542,2.14239276797412,2.92700471786698,2.67979744980525,2.87904096543407,2.55127629851979,4.09658286789345,1.72684981865896,4.05017364028232,1.50791283939272,3.80733978673097,3.93411418415229,2.75936746304733,1.76605648986571,0.937693492737625,0.163934945376675,9.84636616097055,0.315508219416257,0.390438744296638,0.646270193198397,1.19484398976276,2.00518806674155,1.13230612315533,0.404810701674894,1.75353514746787,2.37172666767914,1.60660658210904,5.39372323791421,3.5613120733451,2.93196526836437,3.29940245945071,2.65490276679926,2.91336763385978,2.72091201268276,5.65815239267694,1.77181135728464,3.68922177532713,9.30341855405596,2.18120237686503,3.92147116223193,4.10847785316561,5.27093042874994,5.15677716240934,3.06395645178409,0.900305470156551,0.905510786479282,0.428674070063185,0.709360934569094,1.24858172321449,0.822745103010605,1.8267896946876,2.58138878870081,2.96564899209348,0.661585194164886,7.4198813823666,4.52100394748536,4.94565984410878,4.41677672811605,5.25250879184196,9.91034844541493,1.11255181206306,9.56876932467975,5.15967169908056,6.48180845793991,16.3880557594081,14.8996708215917,15.7856939512501,11.2185763795945,7.55737842547753,9.25939824489639,2.86401185404534,0.632671987162271,2.84647253977588,3.13215488383224,3.76358932826044,3.9305261474312,2.83215127408124,4.54594006489348,3.40282724579238,7.12882353104861,8.07741107013003,4.50954350947352,3.13984746692355,4.30192075188454,4.66682852025714,4.77891346867605,4.56181538825101,4.45957506853865,7.16124116641726,7.34015410979976,5.55643477899814,6.62469014393091,4.4241556887945,5.0681303822541,4.62199307241723,5.1968329191118,4.65469408735452,2.58285761215644,4.32703618271888,2.95379054349154,3.12995994839258,4.95344243257499,3.52891647978942,3.80085734885034,3.17499077413087,3.97381467417334,5.66825959038028,0.443971906748129,0.179427713218951,1.17519231454855,3.09103350451505,3.94133198447482,5.31139710375069,9.4322086794789,5.01572104035363,0,0,0.572895513439397,0.68741272937475,0,0.755393897389701,0.675022500231806,1.35096360967266,0.453142408984205,0.51776031175182,0.830298780673413,1.59609949360412,2.21953687480374,2.18796045361465,1.88651846365184,3.12533964365024,3.33370091702423,2.67845574410562,4.81378814387723,1.51618327058278,5.57654459758527,3.9611531691076,3.46473577638565,4.73786127796033,4.88201486122713,5.23923060411381,4.75125736373908,6.17309505483856,4.53294490883637,3.53277408322554,3.08582327146874,4.2594193478241,7.86839426826159,4.50573891560218,4.32903149910521,3.04612588410035,4.024415403201,3.41990624869196,4.34573164306758,6.17256498823512,5.57584585183618,4.92522411877817,3.27384834535751,4.02835787083512,5.98010494041538,1.24905288968973,3.27504251823572,5.58664740525576,5.35607329792761,6.83833399270498,4.40548887678801
|short_description=p1@Nmnat3
}}

Latest revision as of 07:25, 27 September 2015

Short description:p1@Nmnat3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nmnat3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000112938, ENSMUST00000141427, uc009rdi.1_5end
EntrezGene:Nmnat3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nmnat3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I67.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I311.80
CD326+ enterocyte, pool2.CNhs13197.11849-124I414.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.88
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.61
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.16
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.27
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.28
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.96
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A116.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A313.97
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A525.88
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.21
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A47.95
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.24
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.65
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.18
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.82
GP2+ M cell, pool1.CNhs13228.11845-124H96.89
GP2+ M cell, pool2.CNhs13231.11846-124I18.18
GP2+ M cell, pool3.CNhs13240.11847-124I27.11
Ileum epithelium, pool1.CNhs13199.10252-104B93.23
Ileum epithelium, pool2.CNhs13232.10253-104C14.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I315.24
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G615.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F511.55
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F68.31
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F712.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.52
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.64
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F46.50
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.93
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.31
accessory axillary lymph node, adult.CNhs10475.1063-29H96.21
adrenal gland, adult.CNhs10508.49-24D77.42
adrenal gland, embryo E14.CNhs11038.406-44C54.51
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I15.07
adrenal gland, embryo E18.CNhs11026.1262-18F56.18
adrenal gland, neonate N00.CNhs11191.1311-23C18.94
adrenal gland, neonate N25.CNhs11223.1377-27I35.15
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H17.52
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F56.79
bone (os femoris), neonate N16.CNhs11225.1525-43A610.38
bone (os femoris), neonate N20.CNhs11195.1350-25C39.70
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H78.69
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C79.94
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D49.53
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.97
epididymis, adult.CNhs10490.58-23B29.10
eyeball, adult.CNhs10484.31-12G45.47
eyeball, embryo E12.CNhs11016.345-16C63.25
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C62.86
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G83.19
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I63.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.72
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.92
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D58.24
heart, embryo E11.CNhs10586.331-24E93.52
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C84.92
heart, embryo E16.CNhs11021.457-17C62.78
heart, embryo E17.CNhs11025.479-18E55.81
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E36.07
heart, neonate N03.CNhs11221.1349-25I27.24
heart, neonate N10.CNhs11118.749-24G17.39
heart, neonate N16.CNhs11209.782-15G17.54
heart, neonate N20.CNhs11127.821-26I66.87
heart, neonate N25.CNhs11196.1351-25D35.05
heart, neonate N30.CNhs11202.1390-42D27.11
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I320.49
intestine, adult.CNhs10496.178-9A33.97
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D83.35
intestine, embryo E16.CNhs10585.463-22H47.46
intestine, embryo E17.CNhs10582.482-18D39.56
intestine, embryo E18.CNhs10526.1289-20F79.70
intestine, neonate N00.CNhs11126.644-26D17.59
intestine, neonate N01.CNhs11192.1322-23E99.55
intestine, neonate N06.CNhs11102.688-20B814.33
intestine, neonate N07.CNhs11095.720-20F218.50
intestine, neonate N10.CNhs11098.755-23A516.18
intestine, neonate N20.CNhs11187.827-18D117.08
intestine, neonate N25.CNhs11121.1352-25E310.37
intestine, neonate N30.CNhs11131.1384-42G115.13
kidney, embryo E14.CNhs10606.411-4I92.85
kidney, embryo E15.CNhs10997.434-16F82.97
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I24.07
kidney, embryo E18.CNhs11001.1288-20C76.79
kidney, neonate N00.CNhs11214.646-21G76.87
kidney, neonate N10.CNhs11206.758-6D58.92
kidney, neonate N20.CNhs11113.832-19I110.78
kidney, neonate N25.CNhs11122.1353-25F37.22
kidney, neonate N30.CNhs11203.1385-42H110.12
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F89.51
liver, embryo E13.CNhs10524.378-3H611.01
liver, embryo E14.CNhs10594.409-16E114.17
liver, embryo E15.CNhs10520.433-16D714.61
liver, embryo E16.CNhs10523.462-17F59.65
liver, embryo E17.CNhs10510.481-18A311.20
liver, embryo E18.CNhs10579.499-43G49.78
liver, neonate N00.CNhs11117.641-24F48.59
liver, neonate N03.CNhs11123.1345-25G26.04
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H25.95
liver, neonate N10.CNhs11115.751-24B96.55
liver, neonate N20.CNhs11220.823-25A35.05
liver, neonate N25.CNhs11198.1368-26H14.13
liver, neonate N30.CNhs11106.1382-42D15.79
lung, adult.CNhs10474.28-22B13.70
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A62.35
lung, embryo E18.CNhs10583.1287-20I62.14
lung, neonate N00.CNhs11224.640-42C62.93
lung, neonate N06.CNhs11212.683-20E52.68
lung, neonate N07.CNhs11111.715-19A32.88
lung, neonate N10.CNhs11219.750-23E62.55
lung, neonate N20.CNhs11109.822-18A44.10
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H24.05
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C21.77
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.85
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I75.39
ovary, embryo E18.CNhs11040.505-44H73.56
ovary, neonate N00.CNhs11217.1299-22I42.93
oviduct, adult pregnant day01.CNhs10500.988-6G63.30
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E55.66
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G99.30
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D83.92
pancreas, neonate N16.CNhs11136.787-43B64.11
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G32.97
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C37.42
skin, neonate N00.CNhs11124.650-25G44.52
skin, neonate N03.CNhs11215.662-22H34.95
skin, neonate N06.CNhs11097.693-20I54.42
skin, neonate N10.CNhs11108.762-6C45.25
small intestine, neonate N16.CNhs11114.790-21I19.91
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G29.57
spleen, embryo E16.CNhs11035.461-43C15.16
spleen, embryo E18.CNhs11011.1271-21F26.48
spleen, neonate N10.CNhs11116.752-24D116.39
spleen, neonate N20.CNhs11112.824-19H114.90
spleen, neonate N25.CNhs11099.1354-25G315.79
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C611.22
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D39.26
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G82.85
stomach, embryo E16.CNhs11022.459-17D43.13
stomach, embryo E17.CNhs11006.1035-18D53.76
stomach, embryo E18.CNhs10999.1286-20C63.93
stomach, neonate N03.CNhs11193.1340-24B82.83
stomach, neonate N07.CNhs11210.718-18A94.55
stomach, neonate N25.CNhs11104.1355-25E43.40
stomach, neonate N30.CNhs11134.1386-42I17.13
submandibular gland, adult.CNhs10469.59-29C18.08
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F53.14
testis, embryo E15.CNhs11034.443-27C54.30
testis, embryo E16.CNhs11033.470-26G54.67
testis, embryo E17.CNhs11029.486-18I54.78
testis, embryo E18.CNhs11027.503-18G54.56
testis, neonate N00.CNhs11189.1300-22B74.46
testis, neonate N07.CNhs11222.726-26I47.16
testis, neonate N10.CNhs11204.763-44D97.34
testis, neonate N20.CNhs11110.839-18H35.56
testis, neonate N30.CNhs11130.1391-42E26.62
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I45.07
thymus, embryo E15.CNhs11005.430-45I24.62
thymus, embryo E16.CNhs11002.456-26C55.20
thymus, embryo E17.CNhs10581.478-18C14.65
thymus, embryo E18.CNhs10595.1273-19G42.58
thymus, neonate N02.CNhs11181.1541-43F84.33
thymus, neonate N03.CNhs11137.2104-43C72.95
thymus, neonate N06.CNhs11197.681-26C43.13
thymus, neonate N07.CNhs11211.713-19D34.95
thymus, neonate N10.CNhs11194.748-24E43.53
thymus, neonate N20.CNhs11186.820-7A23.80
thymus, neonate N25.CNhs11125.1362-25G73.17
thymus, neonate N30.CNhs11132.1393-42G23.97
tongue, adult.CNhs10499.32-1B45.67
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E43.09
uterus, adult pregnant day19.CNhs10497.590-15F53.94
uterus, adult.CNhs10509.92-27E55.31
vagina, adult.CNhs10502.89-27D59.43
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F23.13
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.88
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.75
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.26
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.87
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.35
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.93
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.03
whole body, embryo E17.5.CNhs10513.490-9F95.98
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C25.59
whole body, neonate N01.CNhs10576.659-23C65.36
whole body, neonate N06.CNhs10515.692-21D16.84
whole body, neonate N10.CNhs10518.761-6B44.41





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
abdomen element5.60e-1149
abdominal segment element5.60e-1149
abdominal segment of trunk5.60e-1149
abdomen5.60e-1149
gastrointestinal system2.76e-1047
intestine5.16e-1031
digestive system1.05e-09116
digestive tract1.05e-09116
primitive gut1.05e-09116
subdivision of digestive tract1.75e-09114
endoderm-derived structure2.00e-09118
endoderm2.00e-09118
presumptive endoderm2.00e-09118
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