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FFCP PHASE1:Mm9::chr8:108089885..108089971,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=11972
|EntrezGene=11972
|HGNC=
|HGNC=
|MCL_coexpression_id=247
|TSSclassifier=NA
|UniProt=P51863
|UniProt=P51863
|association_with_transcript=0bp_to_ENSMUST00000013304,NM_013477,uc009ndg.1_5end
|association_with_transcript=0bp_to_ENSMUST00000013304,NM_013477,uc009ndg.1_5end
|cluster_id=chr8:108089885..108089971,-
|description=CAGE_peak_1_at_Atp6v0d1_5end
|description=CAGE_peak_1_at_Atp6v0d1_5end
|id=chr8:108089885..108089971,-
|id=chr8:108089885..108089971,-
|ontology_enrichment_celltype=CL:0000055!3.36e-18!50;CL:0002319!1.79e-16!43;CL:0000221!2.09e-16!44;CL:0000133!2.09e-16!44;CL:0000393!2.98e-13!39;CL:0000211!2.98e-13!39;CL:0000540!1.07e-11!33;CL:0000047!1.07e-11!33;CL:0000031!1.07e-11!33;CL:0000404!1.07e-11!33;CL:0000117!3.17e-11!23;CL:0000337!3.17e-11!23;CL:0002321!5.71e-10!70;CL:0000220!5.71e-10!70
|ontology_enrichment_celltype_v019_2=CL:0002319,1.79e-16,43;CL:0000221,2.09e-16,44;CL:0000133,2.09e-16,44;CL:0000393,2.98e-13,39;CL:0000211,2.98e-13,39;CL:0000540,1.07e-11,33;CL:0000047,1.07e-11,33;CL:0000031,1.07e-11,33;CL:0000404,1.07e-11,33;CL:0000117,3.17e-11,23;CL:0000337,3.17e-11,23;CL:0002321,5.71e-10,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!5.07e-29!75;UBERON:0001016!5.07e-29!75;UBERON:0001017!6.01e-28!73;UBERON:0005743!6.01e-28!73;UBERON:0004121!9.81e-28!102;UBERON:0000924!9.81e-28!102;UBERON:0006601!9.81e-28!102;UBERON:0001049!1.67e-20!52;UBERON:0005068!1.67e-20!52;UBERON:0006241!1.67e-20!52;UBERON:0007135!1.67e-20!52;UBERON:0000955!1.83e-19!50;UBERON:0006238!1.83e-19!50;UBERON:0000033!2.28e-19!63;UBERON:0002346!2.69e-19!71;UBERON:0003075!2.69e-19!71;UBERON:0007284!2.69e-19!71;UBERON:0002616!5.23e-19!49;UBERON:0002020!9.54e-16!34;UBERON:0003056!1.04e-14!49;UBERON:0003080!1.46e-14!40;UBERON:0002780!4.92e-14!39;UBERON:0001890!4.92e-14!39;UBERON:0006240!4.92e-14!39;UBERON:0002791!3.31e-13!29;UBERON:0003528!3.31e-13!29;UBERON:0001893!3.31e-13!29;UBERON:0000956!1.25e-09!21;UBERON:0001869!1.25e-09!21;UBERON:0000203!1.25e-09!21;UBERON:0004111!1.86e-09!122;UBERON:0000025!7.78e-09!114;UBERON:0002619!2.76e-08!17;UBERON:0003076!9.40e-07!12;UBERON:0003057!9.40e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.74e-29,95;UBERON:0000924,3.74e-29,95;UBERON:0006601,3.74e-29,95;UBERON:0001016,5.07e-29,75;UBERON:0001017,6.01e-28,73;UBERON:0000073,9.95e-22,54;UBERON:0002346,5.84e-21,64;UBERON:0003075,5.84e-21,64;UBERON:0007284,5.84e-21,64;UBERON:0001049,1.67e-20,52;UBERON:0005068,1.67e-20,52;UBERON:0006241,1.67e-20,52;UBERON:0007135,1.67e-20,52;UBERON:0010371,7.11e-20,73;UBERON:0000955,1.12e-17,47;UBERON:0006238,1.12e-17,47;UBERON:0002616,3.14e-17,46;UBERON:0002020,9.54e-16,34;UBERON:0003056,1.04e-14,49;UBERON:0003080,1.46e-14,40;UBERON:0002780,4.92e-14,39;UBERON:0001890,4.92e-14,39;UBERON:0006240,4.92e-14,39;UBERON:0003528,3.31e-13,29;UBERON:0002791,3.31e-13,29;UBERON:0001893,3.31e-13,29;UBERON:0010314,3.09e-11,92;UBERON:0000956,1.25e-09,21;UBERON:0001869,1.25e-09,21;UBERON:0000203,1.25e-09,21;UBERON:0004111,1.86e-09,122;UBERON:0000025,7.78e-09,114;UBERON:0002619,2.76e-08,17;UBERON:0011216,5.22e-07,194;UBERON:0003076,9.40e-07,12;UBERON:0003057,9.40e-07,12
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.1410731416763,34.8857250854418,38.2631581706478,45.4194132592049,48.9557577376899,47.6910439535188,65.4389854960074,63.5113369129785,51.5711629862148,54.1145221136823,28.258627202312,29.4516113013634,35.1956650902726,35.3897916328983,34.298093474628,34.7377426391432,26.171081353634,27.6828669283877,38.170291090509,34.275570744686,26.2289230121388,39.3286917662919,31.2241309781075,27.5432144712925,26.3169242631198,31.5903354102211,28.7267124352726,34.1162807773273,28.5735053353258,28.9585865288999,31.8610745032416,27.3856644878704,29.2483998586602,32.6086557086577,47.159919791964,45.5071204416833,52.2134645467149,61.2778849728886,47.1382609438545,53.677187979038,41.5754187086692,59.8087777630594,41.1289125308998,92.0545503465818,101.271552031579,93.954864204061,104.658588047306,103.447460485367,95.935024968492,108.003600037089,95.4680950835347,117.363883926909,117.531590767663,29.2680320187378,35.9122386060928,39.9516637464674,32.3331933700831,37.3111429477809,40.0778848421031,34.670489537052,33.171644215462,35.9429514742833,32.3452431057661,29.6570780871581,32.255104377019,35.1155653012059,34.765657755844,38.1371513865272,32.387971007249,37.7782902580229,35.6882057857854,35.0273015682811,33.1197570302394,27.7724094432186,33.5429273641148,34.8116837323089,33.1389829921709,34.726361373257,32.9150824698622,43.1710015979743,35.2513413326709,34.2226366891572,36.474247657753,40.5731761984676,37.234694337963,42.5600284896477,33.1564840137967,38.9671354181906,66.1998031535557,43.511279170846,43.4039529177563,36.9186480892868,38.1623155076762,38.49006071299
|phase1_expression=46.1228679661807,56.5340160375765,61.8798965569769,32.6661348211376,40.0716583957078,24.5103736991359,29.9024179962273,23.8878148366916,19.006477490475,11.9372908424217,3.5955773327356,3.90883579077148,19.6880839420887,22.7293046289393,35.9758542760916,32.8009933171518,58.7631977627643,38.9595774217424,35.3755238702806,33.9511721438424,54.0875325360804,53.4185317460763,51.7175582495092,35.9982951285165,35.099620003277,59.7201242679621,44.3684856043847,41.8014191410625,41.9951756998586,40.3248207615889,43.2374495777844,31.1165029995219,34.4436281047359,15.8481681015439,11.554064790051,16.1247605997738,11.4334839506927,139.37103303539,135.952349947141,118.839889882052,184.116455753707,157.100461540442,166.530051089686,62.0671312619596,65.6922514302454,52.3108243660792,120.488267029598,78.9251066097216,98.1997236823089,87.6878844825018,66.4935502720472,120.752154066576,46.1402166658775,27.5637613964311,21.5100031451177,83.0947978396109,87.106165741382,83.0232068566682,89.6261921608018,104.21122291659,108.385169999557,108.769094794191,141.397872581671,186.72919133589,172.062747086654,202.486832759639,125.532446307212,139.855463137046,73.6196247390191,73.8482482674348,75.9273110478489,144.539398108325,121.698566064339,70.3097187493836,65.270765763419,80.8912532216818,102.407769329431,120.664534490502,123.960472337788,84.8028830105146,88.651526650735,70.3233050251626,145.454342479719,122.119486376875,129.725712362512,96.9328046208367,91.1178757114259,81.4565578256563,96.3994441131433,90.0812996472883,24.3486170509409,55.0671281268087,66.6371907033596,68.5423053380028,69.5260766669006,70.788248161379,49.4364358863767,66.9791167731767,65.4660731599229,68.547877455006,50.1402574404983,50.047326191584,30.5766287647975,49.7746692207332,16.0203370348298,16.4683912558814,20.2209778005913,47.3863100834099,35.4744900596625,48.0952530570032,43.371331691534,44.4519598335726,45.2006374621875,40.0922223869976,36.3349105049328,43.1036408260787,99.866766964687,30.5104643101014,37.1536431818947,37.0446086379567,34.4512768798214,37.8202697445473,52.1896931410742,62.069528966448,84.8259162594493,43.1722423302519,26.2395122667965,23.9961092397363,31.7675567682662,106.051772698614,81.4351073017155,80.9214027606847,100.991930031713,113.281947597336,108.46535926009,97.0202753145191,40.1247093570246,41.427521213161,63.9388578837197,95.9614862842321,37.8650489021468,46.670127199995,50.9575827349138,47.1706079825788,52.3881043465224,51.7579429950793,62.9675589041378,61.8301056066247,34.7064468621876,19.856138417621,26.9205219970842,36.605687315405,30.3071501655902,37.611233984394,45.6836342825634,26.6705917536781,35.812872552975,31.3964446679953,46.034486902086,36.0398844211773,27.4395490177883,30.9706745712946,29.5930919481513,28.1372851398787,26.6882105295164,25.8112678672953,28.4369805483596,30.8260503849327,26.9878153858108,34.47516745661,30.4008035796959,37.8657967431611,32.0543168324934,29.7938249648025,92.527577368216,68.1228533950863,52.5365864944239,34.9074747995878,29.6470668243975,29.7262939981361,28.6085764135047,48.6057294342256,61.821096188874,75.3293479405734,45.5547899082731,71.9734432143928,58.5611036504628,73.0170252391024,64.7280769235479,30.5598598942435,38.0402967779462,43.0145150229433,42.6752777144434,32.6750746063824,33.8123207019241,35.8426337007753,45.9667394587273,44.7466530900232,48.2494778258083,52.8444329766976,56.9905382064191,60.9581989773695,50.9898518589896,34.2032466717993,34.7909421350369,34.6287653072675,37.93484269965,38.1059912408819,40.4855104332458,40.5651553805643,37.7775078385832,37.065790780391,129.391385874619,45.7733365632259,43.0611988898094,40.665199349485,52.2046473348764,62.2352142558744,48.4053358236504,31.8345571774414,34.7115399821515,30.2146252679835,34.0300860018328,47.0692583411502,46.6565536136587,61.076831779491,36.0984480003177,46.7290495158915,50.8660712017384,51.9446707648889,54.2230843058912,52.3629592065072,73.8877291302434,79.4102298375316,52.1270129400178,62.3617046648695,123.142302520636,103.380707574323,34.5902734744785,27.5193310652767,53.6363973007636,57.0040566673092,54.5021196263981,59.742199488138,59.932843328164,52.6522347267228,56.2686875328103,68.0956148933357,58.5025911360855,90.2912899145278,37.6141225801912,46.6531881608209,42.8392703099905,43.3871423417768,29.2039304347918,32.5326052447675,27.5114436837923,32.2514686382586,48.4295104324467,39.0442637888788,42.3822400795883,26.9014959813354,31.0152719194708,42.0328888054635,43.2216295157495,43.3169281642385,69.7901191795265,35.8321577122307,46.0516914266606,45.4394514266976,55.3301528963894,58.5049721734791,61.212235663989,84.9457208029732,57.0252250594816,80.9198510699793,70.7896157756428,26.2169142176953,42.9495375011109,46.0790746451111,56.1050016814741,51.5402425199492,49.8432230637045,118.115917380695,37.9333355371233,39.8326655169019,38.8908507476395,38.8039021429663,40.8715740885865,46.2131909877176,28.7263546689615,29.6697078926155,28.1927946561025,43.9148484286952,28.3120714255116,33.1410731416763,34.8857250854418,38.2631581706478,45.4194132592049,48.9557577376899,47.6910439535188,65.4389854960074,63.5113369129785,51.5711629862148,54.1145221136823,28.258627202312,29.4516113013634,35.1956650902726,35.3897916328983,34.298093474628,34.7377426391432,26.171081353634,27.6828669283877,38.170291090509,34.275570744686,26.2289230121388,39.3286917662919,31.2241309781075,27.5432144712925,26.3169242631198,31.5903354102211,28.7267124352726,34.1162807773273,28.5735053353258,28.9585865288999,31.8610745032416,27.3856644878704,29.2483998586602,32.6086557086577,47.159919791964,45.5071204416833,52.2134645467149,61.2778849728886,47.1382609438545,53.677187979038,41.5754187086692,59.8087777630594,41.1289125308998,92.0545503465818,101.271552031579,93.954864204061,104.658588047306,103.447460485367,95.935024968492,108.003600037089,95.4680950835347,117.363883926909,117.531590767663,29.2680320187378,35.9122386060928,39.9516637464674,32.3331933700831,37.3111429477809,40.0778848421031,34.670489537052,33.171644215462,35.9429514742833,32.3452431057661,29.6570780871581,32.255104377019,35.1155653012059,34.765657755844,38.1371513865272,32.387971007249,37.7782902580229,35.6882057857854,35.0273015682811,33.1197570302394,27.7724094432186,33.5429273641148,34.8116837323089,33.1389829921709,34.726361373257,32.9150824698622,43.1710015979743,35.2513413326709,34.2226366891572,36.474247657753,40.5731761984676,37.234694337963,42.5600284896477,33.1564840137967,38.9671354181906,66.1998031535557,43.511279170846,43.4039529177563,36.9186480892868,38.1623155076762,38.49006071299
|short_description=p1@Atp6v0d1
|short_description=p1@Atp6v0d1
}}
}}

Latest revision as of 07:27, 27 September 2015

Short description:p1@Atp6v0d1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Atp6v0d1_5end
Coexpression cluster:MCL_coexpression_mm9:247
Association with transcript: 0bp_to_ENSMUST00000013304, NM_013477, uc009ndg.1_5end
EntrezGene:Atp6v0d1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Atp6v0d1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G746.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I556.53
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I661.88
CD326+ enterocyte, pool1.CNhs13542.11848-124I332.67
CD326+ enterocyte, pool2.CNhs13197.11849-124I440.07
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I724.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I829.90
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E923.89
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E719.01
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F211.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.60
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.91
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E419.69
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E822.73
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A135.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A332.80
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A558.76
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A238.96
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A435.38
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A633.95
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A354.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H253.42
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I951.72
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D136.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D235.10
GP2+ M cell, pool1.CNhs13228.11845-124H959.72
GP2+ M cell, pool2.CNhs13231.11846-124I144.37
GP2+ M cell, pool3.CNhs13240.11847-124I241.80
Ileum epithelium, pool1.CNhs13199.10252-104B942.00
Ileum epithelium, pool2.CNhs13232.10253-104C140.32
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C843.24
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I331.12
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G634.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F511.55
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F616.12
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F711.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8139.37
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1135.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3118.84
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9184.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2157.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4166.53
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D862.07
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D965.69
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B352.31
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7120.49
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C278.93
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B898.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C387.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C466.49
Mouse Astrocytes, donor3.CNhs12107.11633-122C4120.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A246.14
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I927.56
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A121.51
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C183.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E187.11
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C583.02
Mouse Granule cells, donor1.CNhs12131.11713-123C389.63
Mouse Granule cells, donor2.CNhs12357.11731-123E3104.21
Mouse Granule cells, donor3.CNhs12108.11636-122C7108.39
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6108.77
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1141.40
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7186.73
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7172.06
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2202.49
Mouse Microglia, donor1.CNhs12629.11718-123C8125.53
Mouse Microglia, donor2.CNhs12634.11736-123E8139.86
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D573.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F573.85
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D975.93
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1144.54
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5121.70
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D270.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F265.27
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D680.89
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3102.41
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3120.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7123.96
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D484.80
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F488.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D870.32
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4145.45
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5122.12
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6129.73
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D696.93
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F691.12
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E181.46
Mouse Schwann, donor1.CNhs12507.11728-123D996.40
Mouse Schwann, donor2.CNhs12573.11746-123F990.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G324.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F755.07
Mouse hepatocyte, donor1.CNhs13078.11714-123C466.64
Mouse hepatocyte, donor3.CNhs12615.11637-122C868.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F469.53
Mouse hepatocyte, donor8.CNhs13091.11824-124F670.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A749.44
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I766.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E365.47
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I868.55
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G650.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H150.05
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I830.58
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B649.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G116.02
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G216.47
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G320.22
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B647.39
accessory axillary lymph node, adult.CNhs10475.1063-29H935.47
adrenal gland, adult.CNhs10508.49-24D748.10
adrenal gland, embryo E14.CNhs11038.406-44C543.37
adrenal gland, embryo E16.CNhs11004.1254-43D644.45
adrenal gland, embryo E17.CNhs11043.1263-45I145.20
adrenal gland, embryo E18.CNhs11026.1262-18F540.09
adrenal gland, neonate N00.CNhs11191.1311-23C136.33
adrenal gland, neonate N25.CNhs11223.1377-27I343.10
amnion, adult pregnant day17.5.CNhs10488.583-22A899.87
aorta, adult.CNhs10498.46-23H130.51
bone (os femoris), adult.CNhs10483.56-12G237.15
bone (os femoris), neonate N02.CNhs11227.1985-43F537.04
bone (os femoris), neonate N16.CNhs11225.1525-43A634.45
bone (os femoris), neonate N20.CNhs11195.1350-25C337.82
cecum, adult.CNhs10467.37-13H452.19
cerebellum, adult.CNhs10494.15-8B262.07
cerebellum, neonate N30.CNhs11135.1395-42I284.83
colon, adult.CNhs10468.36-18H743.17
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C726.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D124.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D431.77
corpora quadrigemina, adult.CNhs10501.16-22A4106.05
corpus striatum, adult.CNhs10487.19-21D881.44
corpus striatum, neonate N00.CNhs11226.630-43F180.92
cortex, adult.CNhs10473.12-14D5100.99
cortex, neonate N30.CNhs11107.1392-42F2113.28
diencephalon, adult.CNhs10482.20-12F2108.47
diencephalon, neonate N30.CNhs11201.1388-42B297.02
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B140.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A241.43
epididymis, adult.CNhs10490.58-23B263.94
eyeball, adult.CNhs10484.31-12G495.96
eyeball, embryo E12.CNhs11016.345-16C637.87
eyeball, embryo E14.CNhs10521.399-16E246.67
eyeball, embryo E15.CNhs10593.426-16C950.96
eyeball, embryo E17.CNhs11023.1261-18D447.17
eyeball, neonate N00.CNhs11207.633-15C652.39
eyeball, neonate N01.CNhs11140.1532-43E751.76
eyeball, neonate N02.CNhs11205.1551-44G862.97
eyeball, neonate N16.CNhs11188.777-19A261.83
forelimb, embryo E11.CNhs10596.335-25E234.71
forelimb, embryo E12.CNhs10600.359-14H219.86
forelimb, embryo E13.CNhs10589.384-1E226.92
forelimb, embryo E14.CNhs10577.413-26A836.61
forelimb, embryo E15.CNhs11007.437-20E730.31
forelimb, embryo E17.CNhs10598.1517-43C437.61
forelimb, embryo E18.CNhs11008.1520-43B545.68
gonad, embryo E13.CNhs11044.1564-45I626.67
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C835.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D231.40
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D546.03
heart, embryo E11.CNhs10586.331-24E936.04
heart, embryo E12.CNhs11015.353-12F527.44
heart, embryo E13.CNhs11013.376-3I930.97
heart, embryo E14.CNhs10597.403-26D429.59
heart, embryo E15.CNhs11017.431-16C828.14
heart, embryo E16.CNhs11021.457-17C626.69
heart, embryo E17.CNhs11025.479-18E525.81
heart, embryo E18.CNhs11030.1283-20G328.44
heart, neonate N00.CNhs11213.639-21E330.83
heart, neonate N03.CNhs11221.1349-25I226.99
heart, neonate N10.CNhs11118.749-24G134.48
heart, neonate N16.CNhs11209.782-15G130.40
heart, neonate N20.CNhs11127.821-26I637.87
heart, neonate N25.CNhs11196.1351-25D332.05
heart, neonate N30.CNhs11202.1390-42D229.79
hippocampus, adult.CNhs10478.13-16E892.53
hippocampus, neonate N00.CNhs11228.627-43G168.12
intestinal mucosa, adult.CNhs10506.860-29I352.54
intestine, adult.CNhs10496.178-9A334.91
intestine, embryo E12.CNhs11019.1251-16I529.65
intestine, embryo E13.CNhs11010.381-16D529.73
intestine, embryo E15.CNhs10602.976-16D828.61
intestine, embryo E16.CNhs10585.463-22H448.61
intestine, embryo E17.CNhs10582.482-18D361.82
intestine, embryo E18.CNhs10526.1289-20F775.33
intestine, neonate N00.CNhs11126.644-26D145.55
intestine, neonate N01.CNhs11192.1322-23E971.97
intestine, neonate N06.CNhs11102.688-20B858.56
intestine, neonate N07.CNhs11095.720-20F273.02
intestine, neonate N10.CNhs11098.755-23A564.73
intestine, neonate N20.CNhs11187.827-18D130.56
intestine, neonate N25.CNhs11121.1352-25E338.04
intestine, neonate N30.CNhs11131.1384-42G143.01
kidney, embryo E14.CNhs10606.411-4I942.68
kidney, embryo E15.CNhs10997.434-16F832.68
kidney, embryo E16.CNhs10584.464-22A533.81
kidney, embryo E17.CNhs11028.483-18I235.84
kidney, embryo E18.CNhs11001.1288-20C745.97
kidney, neonate N00.CNhs11214.646-21G744.75
kidney, neonate N10.CNhs11206.758-6D548.25
kidney, neonate N20.CNhs11113.832-19I152.84
kidney, neonate N25.CNhs11122.1353-25F356.99
kidney, neonate N30.CNhs11203.1385-42H160.96
liver, adult pregnant day01.CNhs10466.508-5B250.99
liver, embryo E12.CNhs10601.355-15F834.20
liver, embryo E13.CNhs10524.378-3H634.79
liver, embryo E14.CNhs10594.409-16E134.63
liver, embryo E15.CNhs10520.433-16D737.93
liver, embryo E16.CNhs10523.462-17F538.11
liver, embryo E17.CNhs10510.481-18A340.49
liver, embryo E18.CNhs10579.499-43G440.57
liver, neonate N00.CNhs11117.641-24F437.78
liver, neonate N03.CNhs11123.1345-25G237.07
liver, neonate N06.CNhs11101.684-20A8129.39
liver, neonate N07.CNhs11103.716-20H245.77
liver, neonate N10.CNhs11115.751-24B943.06
liver, neonate N20.CNhs11220.823-25A340.67
liver, neonate N25.CNhs11198.1368-26H152.20
liver, neonate N30.CNhs11106.1382-42D162.24
lung, adult.CNhs10474.28-22B148.41
lung, embryo E12.CNhs10522.354-16G231.83
lung, embryo E14.CNhs10604.404-26F834.71
lung, embryo E15.CNhs11020.432-17C530.21
lung, embryo E16.CNhs10998.458-17B634.03
lung, embryo E17.CNhs10605.480-44A647.07
lung, embryo E18.CNhs10583.1287-20I646.66
lung, neonate N00.CNhs11224.640-42C661.08
lung, neonate N06.CNhs11212.683-20E536.10
lung, neonate N07.CNhs11111.715-19A346.73
lung, neonate N10.CNhs11219.750-23E650.87
lung, neonate N20.CNhs11109.822-18A451.94
lung, neonate N25.CNhs11119.1359-25C754.22
lung, neonate N30.CNhs11133.1394-42H252.36
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A173.89
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A179.41
mammary gland, adult lactating day02.CNhs10480.595-22B652.13
mammary gland, adult pregnant day19.CNhs10476.588-5H262.36
medulla oblongata, adult.CNhs10477.17-12C2123.14
medulla oblongata, neonate N30.CNhs11200.1396-42A3103.38
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C734.59
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C227.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E153.64
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E257.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E354.50
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D759.74
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D859.93
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D952.65
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D456.27
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D568.10
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D658.50
olfactory brain, adult.CNhs10489.18-22I990.29
ovary, adult.CNhs10507.91-2I737.61
ovary, embryo E18.CNhs11040.505-44H746.65
ovary, neonate N00.CNhs11217.1299-22I442.84
oviduct, adult pregnant day01.CNhs10500.988-6G643.39
pancreas, adult.CNhs10486.34-16E429.20
pancreas, embryo E14.CNhs11012.405-44F432.53
pancreas, embryo E15.CNhs11042.1556-45F227.51
pancreas, embryo E16.CNhs11003.460-26E532.25
pancreas, embryo E17.CNhs10599.1558-45G348.43
pancreas, embryo E18.CNhs10580.1535-43I739.04
pancreas, neonate N00.CNhs11105.645-26G942.38
pancreas, neonate N01.CNhs11138.1531-43D726.90
pancreas, neonate N02.CNhs11139.1539-43D831.02
pancreas, neonate N16.CNhs11136.787-43B642.03
pancreas, neonate N25.CNhs11094.1555-45E243.22
pancreas, neonate N30.CNhs11182.1548-44H543.32
pituitary gland, adult.CNhs10493.21-1G869.79
pituitary gland, embryo E12.CNhs11018.346-16E635.83
pituitary gland, embryo E13.CNhs11009.370-44C746.05
pituitary gland, embryo E14.CNhs11037.398-44A545.44
pituitary gland, embryo E15.CNhs10592.427-16B955.33
pituitary gland, embryo E16.CNhs11036.449-43F658.50
pituitary gland, embryo E17.CNhs11039.1265-44F561.21
pituitary gland, neonate N00.CNhs11190.1308-22E984.95
placenta, adult pregnant day10.CNhs10472.539-13I757.03
placenta, adult pregnant day17.CNhs10464.577-18G380.92
prostate, adult.CNhs10470.859-1F870.79
skin, adult.CNhs10492.30-1C326.22
skin, neonate N00.CNhs11124.650-25G442.95
skin, neonate N03.CNhs11215.662-22H346.08
skin, neonate N06.CNhs11097.693-20I556.11
skin, neonate N10.CNhs11108.762-6C451.54
small intestine, neonate N16.CNhs11114.790-21I149.84
spinal cord, adult.CNhs10505.24-13C9118.12
spleen, adult.CNhs10465.25-2G237.93
spleen, embryo E16.CNhs11035.461-43C139.83
spleen, embryo E18.CNhs11011.1271-21F238.89
spleen, neonate N10.CNhs11116.752-24D138.80
spleen, neonate N20.CNhs11112.824-19H140.87
spleen, neonate N25.CNhs11099.1354-25G346.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C628.73
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C929.67
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D328.19
stomach, adult.CNhs10503.33-1H643.91
stomach, embryo E12.CNhs10588.356-43E328.31
stomach, embryo E15.CNhs10603.1252-16G833.14
stomach, embryo E16.CNhs11022.459-17D434.89
stomach, embryo E17.CNhs11006.1035-18D538.26
stomach, embryo E18.CNhs10999.1286-20C645.42
stomach, neonate N03.CNhs11193.1340-24B848.96
stomach, neonate N07.CNhs11210.718-18A947.69
stomach, neonate N25.CNhs11104.1355-25E465.44
stomach, neonate N30.CNhs11134.1386-42I163.51
submandibular gland, adult.CNhs10469.59-29C151.57
testis, adult.CNhs10504.57-7G554.11
testis, embryo E13.CNhs11031.389-23F528.26
testis, embryo E15.CNhs11034.443-27C529.45
testis, embryo E16.CNhs11033.470-26G535.20
testis, embryo E17.CNhs11029.486-18I535.39
testis, embryo E18.CNhs11027.503-18G534.30
testis, neonate N00.CNhs11189.1300-22B734.74
testis, neonate N07.CNhs11222.726-26I426.17
testis, neonate N10.CNhs11204.763-44D927.68
testis, neonate N20.CNhs11110.839-18H338.17
testis, neonate N30.CNhs11130.1391-42E234.28
thymus, adult.CNhs10471.38-12B526.23
thymus, embryo E14.CNhs11041.402-44I439.33
thymus, embryo E15.CNhs11005.430-45I231.22
thymus, embryo E16.CNhs11002.456-26C527.54
thymus, embryo E17.CNhs10581.478-18C126.32
thymus, embryo E18.CNhs10595.1273-19G431.59
thymus, neonate N02.CNhs11181.1541-43F828.73
thymus, neonate N03.CNhs11137.2104-43C734.12
thymus, neonate N06.CNhs11197.681-26C428.57
thymus, neonate N07.CNhs11211.713-19D328.96
thymus, neonate N10.CNhs11194.748-24E431.86
thymus, neonate N20.CNhs11186.820-7A227.39
thymus, neonate N25.CNhs11125.1362-25G729.25
thymus, neonate N30.CNhs11132.1393-42G232.61
tongue, adult.CNhs10499.32-1B447.16
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H345.51
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F752.21
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G561.28
urinary bladder, adult.CNhs10481.879-12E447.14
uterus, adult pregnant day19.CNhs10497.590-15F553.68
uterus, adult.CNhs10509.92-27E541.58
vagina, adult.CNhs10502.89-27D559.81
vesicular gland, adult.CNhs10491.51-27F841.13
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A192.05
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2101.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A393.95
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7104.66
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4103.45
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A595.94
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6108.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A795.47
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8117.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9117.53
whole body, embryo E11.CNhs11014.324-5I829.27
whole body, embryo E12.CNhs10587.857-27C935.91
whole body, embryo E13.CNhs10512.372-23H239.95
whole body, embryo E14.5.CNhs10578.420-27D232.33
whole body, embryo E14.CNhs10519.395-14B137.31
whole body, embryo E16.CNhs10514.453-14F240.08
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G534.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G533.17
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G535.94
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G532.35
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G529.66
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G532.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G535.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G534.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G538.14
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G532.39
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G537.78
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G535.69
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G535.03
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G533.12
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G527.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G533.54
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G534.81
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G533.14
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G534.73
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G532.92
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G543.17
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G535.25
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G534.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G536.47
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G540.57
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G537.23
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G542.56
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G533.16
whole body, embryo E17.5.CNhs10513.490-9F938.97
whole body, embryo E17.CNhs10517.475-3I566.20
whole body, embryo E18.CNhs10516.493-3B343.51
whole body, neonate N00.CNhs10525.657-19C243.40
whole body, neonate N01.CNhs10576.659-23C636.92
whole body, neonate N06.CNhs10515.692-21D138.16
whole body, neonate N10.CNhs10518.761-6B438.49





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell1.79e-1643
ectodermal cell2.09e-1644
neurectodermal cell2.09e-1644
electrically responsive cell2.98e-1339
electrically active cell2.98e-1339
neuron1.07e-1133
neuronal stem cell1.07e-1133
neuroblast1.07e-1133
electrically signaling cell1.07e-1133
CNS neuron (sensu Vertebrata)3.17e-1123
neuroblast (sensu Vertebrata)3.17e-1123
embryonic cell5.71e-1070

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure3.74e-2995
ectoderm3.74e-2995
presumptive ectoderm3.74e-2995
nervous system5.07e-2975
central nervous system6.01e-2873
regional part of nervous system9.95e-2254
neurectoderm5.84e-2164
neural plate5.84e-2164
presumptive neural plate5.84e-2164
neural tube1.67e-2052
neural rod1.67e-2052
future spinal cord1.67e-2052
neural keel1.67e-2052
ecto-epithelium7.11e-2073
brain1.12e-1747
future brain1.12e-1747
regional part of brain3.14e-1746
gray matter9.54e-1634
pre-chordal neural plate1.04e-1449
anterior neural tube1.46e-1440
regional part of forebrain4.92e-1439
forebrain4.92e-1439
future forebrain4.92e-1439
brain grey matter3.31e-1329
regional part of telencephalon3.31e-1329
telencephalon3.31e-1329
structure with developmental contribution from neural crest3.09e-1192
cerebral cortex1.25e-0921
cerebral hemisphere1.25e-0921
pallium1.25e-0921
anatomical conduit1.86e-09122
tube7.78e-09114
regional part of cerebral cortex2.76e-0817
organ system subdivision5.22e-07194
posterior neural tube9.40e-0712
chordal neural plate9.40e-0712
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