FFCP PHASE1:Mm9::chr13:35055660..35055685,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=69123 | |EntrezGene=69123 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=946 | |||
|TSSclassifier=NA | |||
|UniProt=Q78JN3 | |UniProt=Q78JN3 | ||
|association_with_transcript=0bp_to_ENSMUST00000021853,NM_026947,uc007qbv.1_5end | |||
|cluster_id=chr13:35055660..35055685,- | |||
|description=CAGE_peak_1_at_Eci3_5end | |||
|id=chr13:35055660..35055685,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.32e-08,9;CL:0002251,1.32e-08,9;CL:0000239,1.88e-08,6;CL:0000677,1.88e-08,6;CL:0000584,1.88e-08,6;CL:0000075,4.32e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.85e-20!43;UBERON:0005409!7.73e-18!59;UBERON:0000344!8.67e-10!15;UBERON:0001242!1.07e-08!13;UBERON:0000060!1.07e-08!13;UBERON:0001262!1.07e-08!13;UBERON:0004786!1.07e-08!13;UBERON:0006554!2.35e-08!16;UBERON:0001008!4.22e-08!17;UBERON:0002113!1.56e-07!14;UBERON:0003918!1.56e-07!14;UBERON:0005095!1.56e-07!14;UBERON:0007687!1.56e-07!14;UBERON:0002108!7.20e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.22e-24,31;UBERON:0005409,4.32e-17,47;UBERON:0000344,1.10e-15,15;UBERON:0001242,1.41e-13,13;UBERON:0001262,1.41e-13,13;UBERON:0004786,1.41e-13,13;UBERON:0002113,6.38e-10,14;UBERON:0003918,6.38e-10,14;UBERON:0011143,6.38e-10,14;UBERON:0005095,6.38e-10,14;UBERON:0007687,6.38e-10,14;UBERON:0006554,6.40e-10,18;UBERON:0004923,1.67e-09,24;UBERON:0001008,3.22e-09,19;UBERON:0003350,1.32e-08,9;UBERON:0004808,1.32e-08,9;UBERON:0001277,1.32e-08,9;UBERON:0000485,9.83e-07,11 | |||
|phase1_expression=0.480446541314382,16.40184415905,11.8299802241279,51.1164517108543,41.0734498556005,3.02182689441402,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,21.1757792476164,0,0,7.03966660290989,6.8822784320151,15.5042630311055,13.3536218809313,7.75696437669201,46.3657143473552,26.9672238843126,4.43461021310609,0,0,0,0.866554859253824,2.99222361645286,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,27.2462175055599,0,0,0,0,0,0,0,0,0.253359865475099,0,35.8537382317848,0.517875767294343,2.52351636410202,0.173485326766136,0.608930956624282,0.230615497256059,0.301445281105245,0.352766121407114,0.502666365318702,0.247194967734374,10.7003524120735,0,0.161766849947409,0,0,13.0474232852686,0,0,62.8424355813135,0,0,0,0.149790639404823,0,0,0,0,0,0,0.81471491080253,1.11966273549084,0.252722758433675,2.31486041475121,0.520481771850815,0.689706313300419,0.180062129805349,0.452114453507145,0.340182495756639,0.384341160854549,0.468508622798644,0.776110112217047,0,0.189106080167819,0.527853372491847,0.657587197282725,0.278047249225598,0.696504333044333,0.411564272815887,0.199034266818493,0,0,0,0.207125772535502,1.17263029990548,0.720248245844059,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0.536546802799238,0,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0,0.210289948564127,0.102904612379284,122.915787269973,17.4537373997939,0.213288250535234,0.464473343720877,0.902072229254653,0.80673409849337,1.77902435075896,1.33157938278791,50.3000805237182,1.97638745668813,1.50801125280162,1.1937388322469,2.14460495831032,51.2327062932906,63.5445866631601,42.0188086566715,0.379335801906163,1.37098215131675,5.63538678365402,6.92414514674068,14.9343415119072,8.06561928738663,12.6473074248515,71.1480913261682,118.063043336714,102.78983754686,3.55743152504579,0.166845105716094,0,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0.936113019343682,0,0.538192240565737,0,0.184753190166605,0.757965647081939,0.488894929326078,0,0,0.502518772325447,0.238043640886014,0,0.315270288212382,0,0,0.327726629431476,0.172684981865896,0,0,0.54390568381871,2.95058563811422,3.86311444826625,0.481651769963376,0.117211686592203,0,2.01976741763498,0,0,0,0,0,0,0,0,0,0.642642632843614,1.98716119291576,0.534196811001766,0.488660878060728,0.494910368917606,17.2568679841952,0.242780636154981,0,1.13163047853539,2.36241514304618,0.922305443831782,0.258428293168221,2.18120237686503,2.85197902707777,6.32073515871632,9.48767477174989,10.3135543248187,0,0.900305470156551,0.388076051348264,0,0.177340233642274,0.178368817602071,0.987294123612726,0.304464949114599,0.469343416127421,1.27099242518292,5.07215315526412,1.31909002353184,0.161464426695906,0.0603129249281559,0.358117032009409,0.328281799490123,23.0269860937582,0,0,0.206386867963223,0,0,0,0.228778173206523,0,0,0.138199973804424,0,0.790839983952838,0.406638934253697,1.08005340821801,0.627264888043406,0.436725127492355,1.34864346384821,0.495920734352016,0.26175594198403,8.68420321055012,0,0,0.299033092087958,0.330916980914195,1.36115831840833,0.904118764344118,1.18269287843545,0.821500670520278,0,0.314578033277133,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0.192423683280659,0,0.226730383615211,0,0,0,0.965947970160952,0.187682475451182,0.36630324853453,0.214368379079066,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.682934423016537,0,0.419226325255965,0,0,0,0.320919209591815,0.758091635291392,0.25347929989024,0.377252682772152,0.468207537349412,0.512201219238954,0.459483751644906,0.476293691283074,0.347652977834566,0.192909220463705,0,0.883193520806384,0.342869252385415,0.70990322463735,0.953744759789284,0.290692833264657,0.752875043322645,0.592302255241736,0.365855945745545,1.05227884575137,0.407412341537585,1.12228454331548,0.474540072496697,0.197008964751127,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0.382576664137687,0,0 | |phase1_expression=0.480446541314382,16.40184415905,11.8299802241279,51.1164517108543,41.0734498556005,3.02182689441402,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,21.1757792476164,0,0,7.03966660290989,6.8822784320151,15.5042630311055,13.3536218809313,7.75696437669201,46.3657143473552,26.9672238843126,4.43461021310609,0,0,0,0.866554859253824,2.99222361645286,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,27.2462175055599,0,0,0,0,0,0,0,0,0.253359865475099,0,35.8537382317848,0.517875767294343,2.52351636410202,0.173485326766136,0.608930956624282,0.230615497256059,0.301445281105245,0.352766121407114,0.502666365318702,0.247194967734374,10.7003524120735,0,0.161766849947409,0,0,13.0474232852686,0,0,62.8424355813135,0,0,0,0.149790639404823,0,0,0,0,0,0,0.81471491080253,1.11966273549084,0.252722758433675,2.31486041475121,0.520481771850815,0.689706313300419,0.180062129805349,0.452114453507145,0.340182495756639,0.384341160854549,0.468508622798644,0.776110112217047,0,0.189106080167819,0.527853372491847,0.657587197282725,0.278047249225598,0.696504333044333,0.411564272815887,0.199034266818493,0,0,0,0.207125772535502,1.17263029990548,0.720248245844059,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0.536546802799238,0,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0,0.210289948564127,0.102904612379284,122.915787269973,17.4537373997939,0.213288250535234,0.464473343720877,0.902072229254653,0.80673409849337,1.77902435075896,1.33157938278791,50.3000805237182,1.97638745668813,1.50801125280162,1.1937388322469,2.14460495831032,51.2327062932906,63.5445866631601,42.0188086566715,0.379335801906163,1.37098215131675,5.63538678365402,6.92414514674068,14.9343415119072,8.06561928738663,12.6473074248515,71.1480913261682,118.063043336714,102.78983754686,3.55743152504579,0.166845105716094,0,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0.936113019343682,0,0.538192240565737,0,0.184753190166605,0.757965647081939,0.488894929326078,0,0,0.502518772325447,0.238043640886014,0,0.315270288212382,0,0,0.327726629431476,0.172684981865896,0,0,0.54390568381871,2.95058563811422,3.86311444826625,0.481651769963376,0.117211686592203,0,2.01976741763498,0,0,0,0,0,0,0,0,0,0.642642632843614,1.98716119291576,0.534196811001766,0.488660878060728,0.494910368917606,17.2568679841952,0.242780636154981,0,1.13163047853539,2.36241514304618,0.922305443831782,0.258428293168221,2.18120237686503,2.85197902707777,6.32073515871632,9.48767477174989,10.3135543248187,0,0.900305470156551,0.388076051348264,0,0.177340233642274,0.178368817602071,0.987294123612726,0.304464949114599,0.469343416127421,1.27099242518292,5.07215315526412,1.31909002353184,0.161464426695906,0.0603129249281559,0.358117032009409,0.328281799490123,23.0269860937582,0,0,0.206386867963223,0,0,0,0.228778173206523,0,0,0.138199973804424,0,0.790839983952838,0.406638934253697,1.08005340821801,0.627264888043406,0.436725127492355,1.34864346384821,0.495920734352016,0.26175594198403,8.68420321055012,0,0,0.299033092087958,0.330916980914195,1.36115831840833,0.904118764344118,1.18269287843545,0.821500670520278,0,0.314578033277133,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0.192423683280659,0,0.226730383615211,0,0,0,0.965947970160952,0.187682475451182,0.36630324853453,0.214368379079066,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.682934423016537,0,0.419226325255965,0,0,0,0.320919209591815,0.758091635291392,0.25347929989024,0.377252682772152,0.468207537349412,0.512201219238954,0.459483751644906,0.476293691283074,0.347652977834566,0.192909220463705,0,0.883193520806384,0.342869252385415,0.70990322463735,0.953744759789284,0.290692833264657,0.752875043322645,0.592302255241736,0.365855945745545,1.05227884575137,0.407412341537585,1.12228454331548,0.474540072496697,0.197008964751127,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0.382576664137687,0,0 | ||
|short_description=p1@Eci3 | |||
}} | }} |
Latest revision as of 13:13, 1 October 2015
Short description: | p1@Eci3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Eci3_5end |
Coexpression cluster: | MCL_coexpression_mm9:946 |
Association with transcript: | 0bp_to_ENSMUST00000021853, NM_026947, uc007qbv.1_5end |
EntrezGene: | Eci3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.32e-08 | 9 |
epithelial cell of alimentary canal | 1.32e-08 | 9 |
brush border epithelial cell | 1.88e-08 | 6 |
gut absorptive cell | 1.88e-08 | 6 |
enterocyte | 1.88e-08 | 6 |
columnar/cuboidal epithelial cell | 4.32e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.22e-24 | 31 |
gastrointestinal system | 4.32e-17 | 47 |
mucosa | 1.10e-15 | 15 |
intestinal mucosa | 1.41e-13 | 13 |
wall of intestine | 1.41e-13 | 13 |
gastrointestinal system mucosa | 1.41e-13 | 13 |
kidney | 6.38e-10 | 14 |
kidney mesenchyme | 6.38e-10 | 14 |
upper urinary tract | 6.38e-10 | 14 |
kidney rudiment | 6.38e-10 | 14 |
kidney field | 6.38e-10 | 14 |
urinary system structure | 6.40e-10 | 18 |
organ component layer | 1.67e-09 | 24 |
renal system | 3.22e-09 | 19 |
epithelium of mucosa | 1.32e-08 | 9 |
gastrointestinal system epithelium | 1.32e-08 | 9 |
intestinal epithelium | 1.32e-08 | 9 |
simple columnar epithelium | 9.83e-07 | 11 |