Personal tools

FFCP PHASE1:Mm9::chr15:99500758..99500827,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr15:99500758..99500827,+
|DHSsupport=NA
|short_description=p1@Accn2
|DPIdataset=NA
|description=CAGE_peak_1_at_Accn2_5end
|association_with_transcript=-321bp_to_ENSMUST00000023758,NM_009597,uc007xqa.1_5end
|EntrezGene=11419
|EntrezGene=11419
|HGNC=
|HGNC=
|MCL_coexpression_id=87
|TSSclassifier=NA
|UniProt=Q6NXK8
|UniProt=Q6NXK8
|association_with_transcript=-321bp_to_ENSMUST00000023758,NM_009597,uc007xqa.1_5end
|cluster_id=chr15:99500758..99500827,+
|description=CAGE_peak_1_at_Accn2_5end
|id=chr15:99500758..99500827,+
|ontology_enrichment_celltype=CL:0000540!6.80e-18!33;CL:0000047!6.80e-18!33;CL:0000031!6.80e-18!33;CL:0000404!6.80e-18!33;CL:0000117!4.03e-17!23;CL:0000337!4.03e-17!23;CL:0000221!2.80e-13!44;CL:0000133!2.80e-13!44;CL:0000393!3.63e-13!39;CL:0000211!3.63e-13!39;CL:0002319!5.23e-13!43;CL:0000055!2.25e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000117,9.88e-23,23;CL:0000337,9.88e-23,23;CL:0000540,1.06e-20,33;CL:0000047,1.06e-20,33;CL:0000031,1.06e-20,33;CL:0000404,1.06e-20,33;CL:0000393,8.92e-16,39;CL:0000211,8.92e-16,39;CL:0000221,1.41e-15,44;CL:0000133,1.41e-15,44;CL:0002319,3.28e-15,43;CL:0002609,5.25e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.69e-30!73;UBERON:0005743!2.69e-30!73;UBERON:0000073!3.79e-29!75;UBERON:0001016!3.79e-29!75;UBERON:0001049!2.41e-24!52;UBERON:0005068!2.41e-24!52;UBERON:0006241!2.41e-24!52;UBERON:0007135!2.41e-24!52;UBERON:0002346!2.73e-23!71;UBERON:0003075!2.73e-23!71;UBERON:0007284!2.73e-23!71;UBERON:0004121!1.97e-22!102;UBERON:0000924!1.97e-22!102;UBERON:0006601!1.97e-22!102;UBERON:0000955!3.67e-22!50;UBERON:0006238!3.67e-22!50;UBERON:0002616!1.46e-21!49;UBERON:0000033!1.79e-21!63;UBERON:0002020!5.04e-20!34;UBERON:0003056!1.53e-18!49;UBERON:0003080!2.78e-18!40;UBERON:0002780!1.27e-17!39;UBERON:0001890!1.27e-17!39;UBERON:0006240!1.27e-17!39;UBERON:0002791!4.83e-16!29;UBERON:0003528!4.83e-16!29;UBERON:0001893!4.83e-16!29;UBERON:0007811!1.33e-12!86;UBERON:0000153!8.39e-12!94;UBERON:0000956!8.34e-11!21;UBERON:0001869!8.34e-11!21;UBERON:0000203!8.34e-11!21;UBERON:0002619!3.05e-08!17;UBERON:0002021!3.11e-07!10;UBERON:0000411!3.11e-07!10;UBERON:0001950!3.11e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.67e-34,73;UBERON:0001016,1.44e-32,75;UBERON:0000073,8.87e-30,54;UBERON:0002346,1.27e-28,64;UBERON:0003075,1.27e-28,64;UBERON:0007284,1.27e-28,64;UBERON:0001049,4.78e-28,52;UBERON:0005068,4.78e-28,52;UBERON:0006241,4.78e-28,52;UBERON:0007135,4.78e-28,52;UBERON:0002020,1.85e-27,34;UBERON:0004121,3.43e-27,95;UBERON:0000924,3.43e-27,95;UBERON:0006601,3.43e-27,95;UBERON:0010371,1.12e-24,73;UBERON:0000955,7.32e-23,47;UBERON:0006238,7.32e-23,47;UBERON:0002616,4.31e-22,46;UBERON:0003528,5.39e-22,29;UBERON:0002791,5.39e-22,29;UBERON:0001893,5.39e-22,29;UBERON:0003080,1.18e-20,40;UBERON:0003056,5.36e-20,49;UBERON:0002780,8.59e-20,39;UBERON:0001890,8.59e-20,39;UBERON:0006240,8.59e-20,39;UBERON:0010314,1.62e-16,92;UBERON:0000956,8.12e-15,21;UBERON:0001869,8.12e-15,21;UBERON:0000203,8.12e-15,21;UBERON:0002619,2.68e-11,17;UBERON:0002021,2.77e-09,10;UBERON:0000411,2.77e-09,10;UBERON:0001950,2.77e-09,10;UBERON:0002420,2.09e-08,8;UBERON:0007245,2.09e-08,8;UBERON:0010009,2.09e-08,8;UBERON:0010011,2.09e-08,8;UBERON:0000454,2.09e-08,8;UBERON:0003076,7.83e-08,12;UBERON:0003057,7.83e-08,12;UBERON:0002240,2.72e-07,6;UBERON:0005174,2.72e-07,6;UBERON:0001137,2.72e-07,6
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0.65407546914134,0,0,0,0,0,0,0,0,0,0,42.6887732413751,53.9570798857474,51.3403436840005,0,0,0,0,0,1.79760066311043,2.68952813725088,21.1526809109294,30.2413301862987,25.86997024622,45.4185065202048,38.872863207484,22.9057794531964,20.4150853268843,26.6573448116906,11.0115880999389,10.0872997087298,11.0596703944495,34.5542073853108,36.6865450845663,31.7757156039624,9.77140496504833,9.56696437053856,11.0014738399303,53.3277739707339,41.8572741549363,49.2094536978794,0,0.0755715601067855,0,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0,1.83096445709685,0,0,0,0,0,0,0.11418387971906,0,0,2.4287945747259,0.304465478312141,0.461230994512117,0.150722640552623,0,0,0,0,0,0.161766849947409,0,0,0,15.2246014446005,14.2423760633149,0,0,0,0,16.3271796951257,26.5350349634803,41.717244901471,13.210648334613,14.0643501531682,10.1816141834184,14.4394724130304,0.509196819251581,0,0,0.420883711772948,0,1.14951052216736,1.26043490863744,1.20563854268572,1.02054748726992,1.0249097622788,1.49922759295566,0.517406741478031,0,0.189106080167819,0.351902248327898,1.09597866213787,0.278047249225598,0.696504333044333,0,0.59710280045548,0,0,0,0.414251545071004,0,0.36012412292203,0.473489471170421,0,0.154267112887378,0.232533944750408,0.268273401399619,0,0,0,0,0,0,0,6.72927835405207,26.034866931959,0,0,0.426576501070468,0.696710015581316,0.38660238396628,0.403367049246685,0,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0,0,0.569003702859245,0,1.1270773567308,0,0,0.0701358198903186,0,0,0,0,0,0.500535317148282,0.393117990226406,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0.568474235311454,0.162964976442026,0,0.234690248288502,0.167506257441816,0.238043640886014,0,0.315270288212382,0,0,0,0,0,0,0,0,0,9.47248480927973,6.21221938938677,1.80328439914343,0,1.57754109708128,1.56175497718655,3.23135096599198,1.19484398976276,1.11399337041197,1.69845918473299,0.809621403349789,0.584511715822624,0.395287777946524,10.9249247583414,0,0.35613120733451,0.488660878060728,0,0,0.728341908464944,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0.720244376125241,0.258717367565509,0.857348140126369,0.354680467284547,1.60531935841864,2.96188237083818,1.8267896946876,0,0,0,0,0,0.120625849856312,0,0,0,8.34413859047294,0.170870880797853,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.632671987162271,0.813277868507395,0.432021363287205,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0,0,0,2.54178128274764,0.992750942742586,0.583353565032143,0.258319646955462,0,0.117357238645754,0,0.524296722128554,0,0,0,0.810900861160657,1.64337531463724,0.77952493786677,0.358053391334963,0.39736270956253,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0.221985953374065,0.0897138566094757,0,0,0,0,0,0,20.3310663342144,22.0956113523445,14.3223878359849,18.5601436931183,9.59115527678899,13.5970901530146,9.45031500324528,11.7083512838297,12.6879874515577,11.39072685854,0.93408612825759,9.17757208822371,6.82934423016537,6.32077464377565,6.49800804146745,4.04455718590031,4.4449345560323,4.12070114477788,5.45562656306086,4.80124702351215,7.85785829659743,3.39527414494937,4.02658482120494,4.28968521112624,4.65227298540468,4.76293691283074,3.59241410429052,3.6652751888104,5.35711671044299,3.97437084362873,2.40008476669791,4.2594193478241,3.09967046931517,3.92435324907287,3.48204707536723,3.80765735512544,5.48783918618318,4.73525480588117,4.88894809845102,7.2948495315506,4.03359061622192,3.05363895364247,3.27384834535751,2.94379998253335,4.05103883060397,17.4867404556562,4.44470056046276,4.29742108096597,1.53030665655075,0.441182838239031,0.231867835620421
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0.65407546914134,0,0,0,0,0,0,0,0,0,0,42.6887732413751,53.9570798857474,51.3403436840005,0,0,0,0,0,1.79760066311043,2.68952813725088,21.1526809109294,30.2413301862987,25.86997024622,45.4185065202048,38.872863207484,22.9057794531964,20.4150853268843,26.6573448116906,11.0115880999389,10.0872997087298,11.0596703944495,34.5542073853108,36.6865450845663,31.7757156039624,9.77140496504833,9.56696437053856,11.0014738399303,53.3277739707339,41.8572741549363,49.2094536978794,0,0.0755715601067855,0,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0,1.83096445709685,0,0,0,0,0,0,0.11418387971906,0,0,2.4287945747259,0.304465478312141,0.461230994512117,0.150722640552623,0,0,0,0,0,0.161766849947409,0,0,0,15.2246014446005,14.2423760633149,0,0,0,0,16.3271796951257,26.5350349634803,41.717244901471,13.210648334613,14.0643501531682,10.1816141834184,14.4394724130304,0.509196819251581,0,0,0.420883711772948,0,1.14951052216736,1.26043490863744,1.20563854268572,1.02054748726992,1.0249097622788,1.49922759295566,0.517406741478031,0,0.189106080167819,0.351902248327898,1.09597866213787,0.278047249225598,0.696504333044333,0,0.59710280045548,0,0,0,0.414251545071004,0,0.36012412292203,0.473489471170421,0,0.154267112887378,0.232533944750408,0.268273401399619,0,0,0,0,0,0,0,6.72927835405207,26.034866931959,0,0,0.426576501070468,0.696710015581316,0.38660238396628,0.403367049246685,0,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0,0,0.569003702859245,0,1.1270773567308,0,0,0.0701358198903186,0,0,0,0,0,0.500535317148282,0.393117990226406,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0.568474235311454,0.162964976442026,0,0.234690248288502,0.167506257441816,0.238043640886014,0,0.315270288212382,0,0,0,0,0,0,0,0,0,9.47248480927973,6.21221938938677,1.80328439914343,0,1.57754109708128,1.56175497718655,3.23135096599198,1.19484398976276,1.11399337041197,1.69845918473299,0.809621403349789,0.584511715822624,0.395287777946524,10.9249247583414,0,0.35613120733451,0.488660878060728,0,0,0.728341908464944,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0.720244376125241,0.258717367565509,0.857348140126369,0.354680467284547,1.60531935841864,2.96188237083818,1.8267896946876,0,0,0,0,0,0.120625849856312,0,0,0,8.34413859047294,0.170870880797853,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.632671987162271,0.813277868507395,0.432021363287205,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0,0,0,2.54178128274764,0.992750942742586,0.583353565032143,0.258319646955462,0,0.117357238645754,0,0.524296722128554,0,0,0,0.810900861160657,1.64337531463724,0.77952493786677,0.358053391334963,0.39736270956253,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0.221985953374065,0.0897138566094757,0,0,0,0,0,0,20.3310663342144,22.0956113523445,14.3223878359849,18.5601436931183,9.59115527678899,13.5970901530146,9.45031500324528,11.7083512838297,12.6879874515577,11.39072685854,0.93408612825759,9.17757208822371,6.82934423016537,6.32077464377565,6.49800804146745,4.04455718590031,4.4449345560323,4.12070114477788,5.45562656306086,4.80124702351215,7.85785829659743,3.39527414494937,4.02658482120494,4.28968521112624,4.65227298540468,4.76293691283074,3.59241410429052,3.6652751888104,5.35711671044299,3.97437084362873,2.40008476669791,4.2594193478241,3.09967046931517,3.92435324907287,3.48204707536723,3.80765735512544,5.48783918618318,4.73525480588117,4.88894809845102,7.2948495315506,4.03359061622192,3.05363895364247,3.27384834535751,2.94379998253335,4.05103883060397,17.4867404556562,4.44470056046276,4.29742108096597,1.53030665655075,0.441182838239031,0.231867835620421
|short_description=p1@Accn2
}}
}}

Latest revision as of 14:02, 1 October 2015

Short description:p1@Accn2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Accn2_5end
Coexpression cluster:MCL_coexpression_mm9:87
Association with transcript: -321bp_to_ENSMUST00000023758, NM_009597, uc007xqa.1_5end
EntrezGene:Accn2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Accn2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C342.69
Mouse Granule cells, donor2.CNhs12357.11731-123E353.96
Mouse Granule cells, donor3.CNhs12108.11636-122C751.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D521.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F530.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D925.87
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F145.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D538.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D222.91
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F220.42
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D626.66
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.06
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D434.55
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F436.69
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D831.78
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.77
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D653.33
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F641.86
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E149.21
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B215.22
cerebellum, neonate N30.CNhs11135.1395-42I214.24
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A416.33
corpus striatum, adult.CNhs10487.19-21D826.54
corpus striatum, neonate N00.CNhs11226.630-43F141.72
cortex, adult.CNhs10473.12-14D513.21
cortex, neonate N30.CNhs11107.1392-42F214.06
diencephalon, adult.CNhs10482.20-12F210.18
diencephalon, neonate N30.CNhs11201.1388-42B214.44
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E86.73
hippocampus, neonate N00.CNhs11228.627-43G126.03
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C29.47
medulla oblongata, neonate N30.CNhs11200.1396-42A36.21
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.80
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.23
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I910.92
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F52.96
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C98.34
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.54
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I21.64
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A120.33
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A222.10
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.32
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.56
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A513.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.69
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.39
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C99.18
whole body, embryo E13.CNhs10512.372-23H26.83
whole body, embryo E14.5.CNhs10578.420-27D26.32
whole body, embryo E14.CNhs10519.395-14B16.50
whole body, embryo E16.CNhs10514.453-14F24.04
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.59
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.97
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.26
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.92
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.03
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F94.05
whole body, embryo E17.CNhs10517.475-3I517.49
whole body, embryo E18.CNhs10516.493-3B34.44
whole body, neonate N00.CNhs10525.657-19C24.30
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system4.67e-3473
nervous system1.44e-3275
regional part of nervous system8.87e-3054
neurectoderm1.27e-2864
neural plate1.27e-2864
presumptive neural plate1.27e-2864
neural tube4.78e-2852
neural rod4.78e-2852
future spinal cord4.78e-2852
neural keel4.78e-2852
gray matter1.85e-2734
ectoderm-derived structure3.43e-2795
ectoderm3.43e-2795
presumptive ectoderm3.43e-2795
ecto-epithelium1.12e-2473
brain7.32e-2347
future brain7.32e-2347
regional part of brain4.31e-2246
brain grey matter5.39e-2229
regional part of telencephalon5.39e-2229
telencephalon5.39e-2229
anterior neural tube1.18e-2040
pre-chordal neural plate5.36e-2049
regional part of forebrain8.59e-2039
forebrain8.59e-2039
future forebrain8.59e-2039
structure with developmental contribution from neural crest1.62e-1692
cerebral cortex8.12e-1521
cerebral hemisphere8.12e-1521
pallium8.12e-1521
regional part of cerebral cortex2.68e-1117
occipital lobe2.77e-0910
visual cortex2.77e-0910
neocortex2.77e-0910
basal ganglion2.09e-088
nuclear complex of neuraxis2.09e-088
aggregate regional part of brain2.09e-088
collection of basal ganglia2.09e-088
cerebral subcortex2.09e-088
posterior neural tube7.83e-0812
chordal neural plate7.83e-0812
spinal cord2.72e-076
dorsal region element2.72e-076
dorsum2.72e-076
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr15:99500758..99500827,%2B&oldid=4306391"