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FFCP PHASE1:Mm9::chr18:61336648..61336711,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr18:61336648..61336711,-
|DHSsupport=NA
|short_description=p1@Hmgxb3
|DPIdataset=NA
|description=CAGE_peak_1_at_Hmgxb3_5end
|association_with_transcript=0bp_to_ENSMUST00000025524,ENSMUST00000091884,NM_134134,NM_178277,uc008fbq.1,uc008fbr.1,uc008fbs.1,uc008fbt.1,uc012bdp.1_5end
|EntrezGene=106894
|EntrezGene=106894
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=E9Q9W3,G3X9M3,Q6NZP6,Q8BY57,Q8R168,Q9JJ64,Q6AXF8,Q6PEF4,Q8BZN3
|UniProt=E9Q9W3,G3X9M3,Q6NZP6,Q8BY57,Q8R168,Q9JJ64,Q6AXF8,Q6PEF4,Q8BZN3
|association_with_transcript=0bp_to_ENSMUST00000025524,ENSMUST00000091884,NM_134134,NM_178277,uc008fbq.1,uc008fbr.1,uc008fbs.1,uc008fbt.1,uc012bdp.1_5end
|cluster_id=chr18:61336648..61336711,-
|description=CAGE_peak_1_at_Hmgxb3_5end
|id=chr18:61336648..61336711,-
|ontology_enrichment_celltype=CL:0000540!1.72e-08!33;CL:0000047!1.72e-08!33;CL:0000031!1.72e-08!33;CL:0000404!1.72e-08!33;CL:0002319!1.08e-07!43;CL:0000221!1.98e-07!44;CL:0000133!1.98e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000540,1.72e-08,33;CL:0000047,1.72e-08,33;CL:0000031,1.72e-08,33;CL:0000404,1.72e-08,33;CL:0002319,1.08e-07,43;CL:0000221,1.98e-07,44;CL:0000133,1.98e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.54e-17,75;UBERON:0001017,2.90e-17,73;UBERON:0004121,7.73e-16,95;UBERON:0000924,7.73e-16,95;UBERON:0006601,7.73e-16,95;UBERON:0000073,1.08e-13,54;UBERON:0001049,5.54e-13,52;UBERON:0005068,5.54e-13,52;UBERON:0006241,5.54e-13,52;UBERON:0007135,5.54e-13,52;UBERON:0002346,1.37e-12,64;UBERON:0003075,1.37e-12,64;UBERON:0007284,1.37e-12,64;UBERON:0000955,2.91e-12,47;UBERON:0006238,2.91e-12,47;UBERON:0003080,7.18e-12,40;UBERON:0002780,7.42e-12,39;UBERON:0001890,7.42e-12,39;UBERON:0006240,7.42e-12,39;UBERON:0002616,8.23e-12,46;UBERON:0010371,1.76e-11,73;UBERON:0002020,1.87e-11,34;UBERON:0003056,5.23e-11,49;UBERON:0003528,1.05e-10,29;UBERON:0002791,1.05e-10,29;UBERON:0001893,1.05e-10,29;UBERON:0010314,6.81e-10,92;UBERON:0000956,2.03e-08,21;UBERON:0001869,2.03e-08,21;UBERON:0000203,2.03e-08,21;UBERON:0002619,5.79e-07,17
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285,15.8589184358942,15.4447637375176,13.5907392409405,13.3201163885168,14.8350781023303,13.2245529160537,10.7319936213452,12.3134224627203,11.1841076355647,40.5858915852617,20.7827999001131,19.3586433834804,22.3618866595655,20.0197726390483,23.3159453177274,21.2416601948815,22.7857673476913,33.345271527376,35.5128657614229,31.3952706821073,25.9129118915106,12.3662381327,13.8659792172517,16.1101820492466,18.2607229580831,19.2720914137827,19.351467372715,15.9504689348543,16.1546319917036,17.756185950615,19.6611061016839,24.0720965427188,22.9946301520387,20.5703347839561,17.0047787711409,30.4120756122469,23.7741720015111,19.4746154982331,10.4322380777383,15.5776454624481,15.7510396869848,14.7914181564555,16.551879433167,25.9785847603851,29.4608151364593,29.7905666988486,34.0269301040501,21.2375581128899,22.661816921691,19.5756525067224,27.9199145999017,26.2822597210839,26.4057758993428,14.115079271448,14.7639203158381,21.3417007192668,16.2881500435757,17.1882793354945,14.5236371675511,13.1125569402953,11.5379632053781,14.7622836412235,11.3713745293709,10.8996098952803,14.1469756039557,14.7017166727715,14.9178605103345,14.703480052637,16.1939855036245,16.5714586101143,15.6256468575601,16.4834360321323,13.1007038919614,12.0004238334895,16.3277741666591,12.3986818772607,12.3544454137479,14.6810633447916,14.7229417731517,15.1830217484401,12.6273461490165,14.2594319538155,15.7119836064167,15.659822392391,17.2382844157236,12.2769312950907,15.0288735950387,14.4679958235856,21.9833308585392,17.5448706334056,21.2722343507815,11.0947232599929,13.67666798541,12.9845987947436
|phase1_expression=15.0539916278506,13.9590163055744,10.9199817453489,7.25914107136392,9.5170188689806,12.0873075776561,11.2134067485852,22.2092116319511,71.6614595751984,84.0291649495957,42.2908381516997,42.8376493804956,21.4000912414007,27.4500063595652,14.3237197580735,13.970793449898,10.4934281719222,21.293696161681,22.7609959785526,16.5511964201232,18.1992640923289,13.6028603145213,11.2315909329742,8.95957567643077,8.48814339948529,9.76194338995534,12.9228598847722,8.40337807474967,8.7410772949932,10.0812051903972,14.4124831925948,65.408159366342,51.0503773695193,47.5445043046316,12.1317680295535,9.97407872150954,11.0251452381679,6.69650609179052,5.4693474116666,2.61761871986899,9.41170380849623,3.41522742479223,5.82612423637384,10.5753327099485,10.8473316404881,11.1963518818626,11.7358701652206,21.3664653252838,13.8402295122717,20.8039992009483,13.9986421625363,12.9377307928474,18.1205214542355,23.9369506863744,26.2153163331122,12.6057123657614,17.1920063963254,17.0171790451556,24.6826082248709,19.5726662330652,19.0149421051854,19.3141383279405,16.0073063300005,22.497492932035,21.7550599764734,18.4724829885986,23.0692085099172,23.0530983192933,21.9821978093973,22.5459917013923,20.4015212510841,18.2816630018434,21.2033799313549,20.0884910712525,18.2106394934649,29.4150011715207,24.2254938198655,20.9407234459708,19.6616362567992,24.5308495178161,21.3166209593614,20.8365348222704,18.7052609330925,19.6966913511088,19.8637722109853,18.8562294703147,17.7964600998879,24.2319279572891,20.2946198132933,16.0967423027453,15.6526823898906,7.74381489283248,22.4390540123558,7.01614149129162,10.3964226791627,12.5447528387254,12.4995533917259,14.3161470965569,9.35229616570328,16.9602995764963,15.2110893358815,6.41632387071589,7.64415719119937,21.3320010945999,20.9996309780878,19.0019899106324,13.6491600153991,13.245330047411,20.4560928081266,16.0317510190011,16.654591369549,17.354532263792,21.9084722393256,13.565037649736,17.1679512418129,15.3313241422204,23.7307169024999,12.5801440520323,19.4614321428972,14.0737159454246,14.1338571814652,13.5765070877862,18.6391761218122,17.2740670236813,26.3902850584953,14.5610521468897,13.4192939446631,8.99854096490112,9.14905634926066,18.2744580073884,29.7375391832107,21.7382029155255,26.7689453096106,26.338692105024,17.6619837875626,20.766881672673,14.0538322113436,14.8044295026011,15.6688110228878,16.6249066150314,17.1758984710769,19.3117767724117,15.48534316326,15.2211866014072,17.009124787832,22.2917873295639,18.9277483610652,14.7460921321239,18.3232793992916,18.7215019366141,15.3077478022636,13.8093311429372,21.409638190371,22.2881386574187,13.1700567301084,18.1121182804829,12.6398373716382,10.0365683774739,10.7982129770325,15.5344329401626,17.12040237862,13.1445304866541,16.0986420197943,19.0861304794982,14.6553757243009,18.6027155800326,21.9984189147688,14.8291984806305,19.7471819896177,15.9242440156722,16.3758995282629,16.5205985790626,16.4662586468288,14.7627060636409,22.9216043934899,22.6390147234426,10.2429822724977,17.1892868331304,16.8497717922835,15.7920936865098,17.1393723558384,16.1346819698674,18.0126215514345,21.3052701246066,16.6085171540579,15.811099653505,22.8715040008245,11.3405189063456,15.9870551437679,15.2799299471218,12.752144942607,9.55878111620963,14.9837641752935,15.3093006897037,15.7790829942313,14.6628956048626,12.9948166402309,17.7443624322506,15.9988438924371,14.1705742060418,12.55989822731,11.9695249004147,12.4510103376603,15.3497497258807,19.4593405162071,16.864658428864,10.9544465549792,13.2647437863829,11.4581633301639,16.3986798346962,15.8892522239535,10.158772287959,14.3768206527355,10.0478055870496,13.7296576170407,11.36604950762,10.225652570749,9.64887042726734,19.0295785871603,17.2437184711141,11.8964432802679,19.1811946925963,17.6017686216377,16.0806007144143,19.5195785526531,20.4890330250689,18.7585821486367,15.2810635857655,21.0480294627883,13.9283817508377,15.0235934223329,16.2006945611293,37.6978209848181,9.24639662491806,19.1788066477424,19.0396354950265,16.8578119487182,18.7538698547525,9.18035694109382,14.3908428506493,18.9304931649754,17.9601822376454,18.5264122050207,20.3123478259669,20.0518806674155,21.7968928707401,27.1223170122179,23.0882127749936,24.1125544547379,23.4564560987919,15.8972895433261,14.6013795007149,15.6371480979433,17.3218629121162,17.2568679841952,16.2663026223838,13.302236506449,11.3163047853539,12.1073776081117,16.6014979889721,22.7416897988035,14.1778154496227,12.1209108650805,12.9575070753685,17.9211634577498,16.5016869197099,24.1712120085189,14.7650097105674,16.6872702079753,19.7190072229065,19.1527452333655,20.334045206636,20.0749805134588,24.3571959291679,18.0697215209057,29.0209937083434,14.9959310677374,14.8397627647332,12.2712964288888,16.4051155804584,17.1896175364517,19.2044852701722,18.6547735443104,20.5822085231666,17.2579589605831,18.1620443807636,18.3342582096015,11.4904758772862,15.7198361879179,16.7008066440762,13.7682528295023,11.3360676382163,12.1615976947893,10.5013767981662,16.2913036694285,15.8589184358942,15.4447637375176,13.5907392409405,13.3201163885168,14.8350781023303,13.2245529160537,10.7319936213452,12.3134224627203,11.1841076355647,40.5858915852617,20.7827999001131,19.3586433834804,22.3618866595655,20.0197726390483,23.3159453177274,21.2416601948815,22.7857673476913,33.345271527376,35.5128657614229,31.3952706821073,25.9129118915106,12.3662381327,13.8659792172517,16.1101820492466,18.2607229580831,19.2720914137827,19.351467372715,15.9504689348543,16.1546319917036,17.756185950615,19.6611061016839,24.0720965427188,22.9946301520387,20.5703347839561,17.0047787711409,30.4120756122469,23.7741720015111,19.4746154982331,10.4322380777383,15.5776454624481,15.7510396869848,14.7914181564555,16.551879433167,25.9785847603851,29.4608151364593,29.7905666988486,34.0269301040501,21.2375581128899,22.661816921691,19.5756525067224,27.9199145999017,26.2822597210839,26.4057758993428,14.115079271448,14.7639203158381,21.3417007192668,16.2881500435757,17.1882793354945,14.5236371675511,13.1125569402953,11.5379632053781,14.7622836412235,11.3713745293709,10.8996098952803,14.1469756039557,14.7017166727715,14.9178605103345,14.703480052637,16.1939855036245,16.5714586101143,15.6256468575601,16.4834360321323,13.1007038919614,12.0004238334895,16.3277741666591,12.3986818772607,12.3544454137479,14.6810633447916,14.7229417731517,15.1830217484401,12.6273461490165,14.2594319538155,15.7119836064167,15.659822392391,17.2382844157236,12.2769312950907,15.0288735950387,14.4679958235856,21.9833308585392,17.5448706334056,21.2722343507815,11.0947232599929,13.67666798541,12.9845987947436
|short_description=p1@Hmgxb3
}}
}}

Latest revision as of 14:02, 1 October 2015

Short description:p1@Hmgxb3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Hmgxb3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000025524, ENSMUST00000091884, NM_134134, NM_178277, uc008fbq.1, uc008fbr.1, uc008fbs.1, uc008fbt.1, uc012bdp.1_5end
EntrezGene:Hmgxb3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Hmgxb3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G715.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I513.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I610.92
CD326+ enterocyte, pool1.CNhs13542.11848-124I37.26
CD326+ enterocyte, pool2.CNhs13197.11849-124I49.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I712.09
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I811.21
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E922.21
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E771.66
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F284.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E642.29
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F142.84
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E421.40
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E827.45
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A114.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A313.97
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A510.49
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A221.29
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A422.76
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A616.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A318.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H213.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I911.23
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D28.49
GP2+ M cell, pool1.CNhs13228.11845-124H99.76
GP2+ M cell, pool2.CNhs13231.11846-124I112.92
GP2+ M cell, pool3.CNhs13240.11847-124I28.40
Ileum epithelium, pool1.CNhs13199.10252-104B98.74
Ileum epithelium, pool2.CNhs13232.10253-104C110.08
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C814.41
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I365.41
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G651.05
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F512.13
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F69.97
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F711.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H15.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G99.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.83
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.58
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D910.85
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B711.74
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C221.37
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B813.84
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C320.80
Mouse Astrocytes, donor2.CNhs12078.11552-120C414.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C412.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A218.12
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I923.94
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A126.22
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C112.61
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E117.19
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C517.02
Mouse Granule cells, donor1.CNhs12131.11713-123C324.68
Mouse Granule cells, donor2.CNhs12357.11731-123E319.57
Mouse Granule cells, donor3.CNhs12108.11636-122C719.01
Mouse Meningeal cells, donor1.CNhs12132.11716-123C619.31
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C722.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E721.76
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D218.47
Mouse Microglia, donor1.CNhs12629.11718-123C823.07
Mouse Microglia, donor2.CNhs12634.11736-123E823.05
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D521.98
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F522.55
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D920.40
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D521.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D220.09
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F218.21
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D629.42
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D324.23
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F320.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.66
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D424.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F421.32
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D820.84
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E418.71
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.70
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I619.86
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D618.86
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.80
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E124.23
Mouse Schwann, donor1.CNhs12507.11728-123D920.29
Mouse Schwann, donor2.CNhs12573.11746-123F916.10
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G315.65
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F77.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C422.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.02
Mouse hepatocyte, donor6.CNhs13090.11822-124F410.40
Mouse hepatocyte, donor8.CNhs13091.11824-124F612.54
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A712.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I714.32
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I816.96
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G615.21
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G121.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G219.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G313.65
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.25
accessory axillary lymph node, adult.CNhs10475.1063-29H920.46
adrenal gland, adult.CNhs10508.49-24D716.03
adrenal gland, embryo E14.CNhs11038.406-44C516.65
adrenal gland, embryo E16.CNhs11004.1254-43D617.35
adrenal gland, embryo E17.CNhs11043.1263-45I121.91
adrenal gland, embryo E18.CNhs11026.1262-18F513.57
adrenal gland, neonate N00.CNhs11191.1311-23C117.17
adrenal gland, neonate N25.CNhs11223.1377-27I315.33
amnion, adult pregnant day17.5.CNhs10488.583-22A823.73
aorta, adult.CNhs10498.46-23H112.58
bone (os femoris), adult.CNhs10483.56-12G219.46
bone (os femoris), neonate N02.CNhs11227.1985-43F514.07
bone (os femoris), neonate N16.CNhs11225.1525-43A614.13
bone (os femoris), neonate N20.CNhs11195.1350-25C313.58
cecum, adult.CNhs10467.37-13H418.64
cerebellum, adult.CNhs10494.15-8B217.27
cerebellum, neonate N30.CNhs11135.1395-42I226.39
colon, adult.CNhs10468.36-18H714.56
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C713.42
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D19.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D49.15
corpora quadrigemina, adult.CNhs10501.16-22A418.27
corpus striatum, adult.CNhs10487.19-21D829.74
corpus striatum, neonate N00.CNhs11226.630-43F121.74
cortex, adult.CNhs10473.12-14D526.77
cortex, neonate N30.CNhs11107.1392-42F226.34
diencephalon, adult.CNhs10482.20-12F217.66
diencephalon, neonate N30.CNhs11201.1388-42B220.77
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B114.05
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A214.80
epididymis, adult.CNhs10490.58-23B215.67
eyeball, adult.CNhs10484.31-12G416.62
eyeball, embryo E12.CNhs11016.345-16C617.18
eyeball, embryo E14.CNhs10521.399-16E219.31
eyeball, embryo E15.CNhs10593.426-16C915.49
eyeball, embryo E17.CNhs11023.1261-18D415.22
eyeball, neonate N00.CNhs11207.633-15C617.01
eyeball, neonate N01.CNhs11140.1532-43E722.29
eyeball, neonate N02.CNhs11205.1551-44G818.93
eyeball, neonate N16.CNhs11188.777-19A214.75
forelimb, embryo E11.CNhs10596.335-25E218.32
forelimb, embryo E12.CNhs10600.359-14H218.72
forelimb, embryo E13.CNhs10589.384-1E215.31
forelimb, embryo E14.CNhs10577.413-26A813.81
forelimb, embryo E15.CNhs11007.437-20E721.41
forelimb, embryo E17.CNhs10598.1517-43C422.29
forelimb, embryo E18.CNhs11008.1520-43B513.17
gonad, embryo E13.CNhs11044.1564-45I618.11
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C812.64
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D210.04
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D510.80
heart, embryo E11.CNhs10586.331-24E915.53
heart, embryo E12.CNhs11015.353-12F517.12
heart, embryo E13.CNhs11013.376-3I913.14
heart, embryo E14.CNhs10597.403-26D416.10
heart, embryo E15.CNhs11017.431-16C819.09
heart, embryo E16.CNhs11021.457-17C614.66
heart, embryo E17.CNhs11025.479-18E518.60
heart, embryo E18.CNhs11030.1283-20G322.00
heart, neonate N00.CNhs11213.639-21E314.83
heart, neonate N03.CNhs11221.1349-25I219.75
heart, neonate N10.CNhs11118.749-24G115.92
heart, neonate N16.CNhs11209.782-15G116.38
heart, neonate N20.CNhs11127.821-26I616.52
heart, neonate N25.CNhs11196.1351-25D316.47
heart, neonate N30.CNhs11202.1390-42D214.76
hippocampus, adult.CNhs10478.13-16E822.92
hippocampus, neonate N00.CNhs11228.627-43G122.64
intestinal mucosa, adult.CNhs10506.860-29I310.24
intestine, adult.CNhs10496.178-9A317.19
intestine, embryo E12.CNhs11019.1251-16I516.85
intestine, embryo E13.CNhs11010.381-16D515.79
intestine, embryo E15.CNhs10602.976-16D817.14
intestine, embryo E16.CNhs10585.463-22H416.13
intestine, embryo E17.CNhs10582.482-18D318.01
intestine, embryo E18.CNhs10526.1289-20F721.31
intestine, neonate N00.CNhs11126.644-26D116.61
intestine, neonate N01.CNhs11192.1322-23E915.81
intestine, neonate N06.CNhs11102.688-20B822.87
intestine, neonate N07.CNhs11095.720-20F211.34
intestine, neonate N10.CNhs11098.755-23A515.99
intestine, neonate N20.CNhs11187.827-18D115.28
intestine, neonate N25.CNhs11121.1352-25E312.75
intestine, neonate N30.CNhs11131.1384-42G19.56
kidney, embryo E14.CNhs10606.411-4I914.98
kidney, embryo E15.CNhs10997.434-16F815.31
kidney, embryo E16.CNhs10584.464-22A515.78
kidney, embryo E17.CNhs11028.483-18I214.66
kidney, embryo E18.CNhs11001.1288-20C712.99
kidney, neonate N00.CNhs11214.646-21G717.74
kidney, neonate N10.CNhs11206.758-6D516.00
kidney, neonate N20.CNhs11113.832-19I114.17
kidney, neonate N25.CNhs11122.1353-25F312.56
kidney, neonate N30.CNhs11203.1385-42H111.97
liver, adult pregnant day01.CNhs10466.508-5B212.45
liver, embryo E12.CNhs10601.355-15F815.35
liver, embryo E13.CNhs10524.378-3H619.46
liver, embryo E14.CNhs10594.409-16E116.86
liver, embryo E15.CNhs10520.433-16D710.95
liver, embryo E16.CNhs10523.462-17F513.26
liver, embryo E17.CNhs10510.481-18A311.46
liver, embryo E18.CNhs10579.499-43G416.40
liver, neonate N00.CNhs11117.641-24F415.89
liver, neonate N03.CNhs11123.1345-25G210.16
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H210.05
liver, neonate N10.CNhs11115.751-24B913.73
liver, neonate N20.CNhs11220.823-25A311.37
liver, neonate N25.CNhs11198.1368-26H110.23
liver, neonate N30.CNhs11106.1382-42D19.65
lung, adult.CNhs10474.28-22B119.03
lung, embryo E12.CNhs10522.354-16G217.24
lung, embryo E14.CNhs10604.404-26F811.90
lung, embryo E15.CNhs11020.432-17C519.18
lung, embryo E16.CNhs10998.458-17B617.60
lung, embryo E17.CNhs10605.480-44A616.08
lung, embryo E18.CNhs10583.1287-20I619.52
lung, neonate N00.CNhs11224.640-42C620.49
lung, neonate N06.CNhs11212.683-20E518.76
lung, neonate N07.CNhs11111.715-19A315.28
lung, neonate N10.CNhs11219.750-23E621.05
lung, neonate N20.CNhs11109.822-18A413.93
lung, neonate N25.CNhs11119.1359-25C715.02
lung, neonate N30.CNhs11133.1394-42H216.20
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A137.70
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A19.25
mammary gland, adult lactating day02.CNhs10480.595-22B619.18
mammary gland, adult pregnant day19.CNhs10476.588-5H219.04
medulla oblongata, adult.CNhs10477.17-12C216.86
medulla oblongata, neonate N30.CNhs11200.1396-42A318.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.18
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C214.39
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E118.93
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E217.96
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E318.53
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D720.31
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D820.05
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D921.80
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D427.12
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D523.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D624.11
olfactory brain, adult.CNhs10489.18-22I923.46
ovary, adult.CNhs10507.91-2I715.90
ovary, embryo E18.CNhs11040.505-44H714.60
ovary, neonate N00.CNhs11217.1299-22I415.64
oviduct, adult pregnant day01.CNhs10500.988-6G617.32
pancreas, adult.CNhs10486.34-16E417.26
pancreas, embryo E14.CNhs11012.405-44F416.27
pancreas, embryo E15.CNhs11042.1556-45F213.30
pancreas, embryo E16.CNhs11003.460-26E511.32
pancreas, embryo E17.CNhs10599.1558-45G312.11
pancreas, embryo E18.CNhs10580.1535-43I716.60
pancreas, neonate N00.CNhs11105.645-26G922.74
pancreas, neonate N01.CNhs11138.1531-43D714.18
pancreas, neonate N02.CNhs11139.1539-43D812.12
pancreas, neonate N16.CNhs11136.787-43B612.96
pancreas, neonate N25.CNhs11094.1555-45E217.92
pancreas, neonate N30.CNhs11182.1548-44H516.50
pituitary gland, adult.CNhs10493.21-1G824.17
pituitary gland, embryo E12.CNhs11018.346-16E614.77
pituitary gland, embryo E13.CNhs11009.370-44C716.69
pituitary gland, embryo E14.CNhs11037.398-44A519.72
pituitary gland, embryo E15.CNhs10592.427-16B919.15
pituitary gland, embryo E16.CNhs11036.449-43F620.33
pituitary gland, embryo E17.CNhs11039.1265-44F520.07
pituitary gland, neonate N00.CNhs11190.1308-22E924.36
placenta, adult pregnant day10.CNhs10472.539-13I718.07
placenta, adult pregnant day17.CNhs10464.577-18G329.02
prostate, adult.CNhs10470.859-1F815.00
skin, adult.CNhs10492.30-1C314.84
skin, neonate N00.CNhs11124.650-25G412.27
skin, neonate N03.CNhs11215.662-22H316.41
skin, neonate N06.CNhs11097.693-20I517.19
skin, neonate N10.CNhs11108.762-6C419.20
small intestine, neonate N16.CNhs11114.790-21I118.65
spinal cord, adult.CNhs10505.24-13C920.58
spleen, adult.CNhs10465.25-2G217.26
spleen, embryo E16.CNhs11035.461-43C118.16
spleen, embryo E18.CNhs11011.1271-21F218.33
spleen, neonate N10.CNhs11116.752-24D111.49
spleen, neonate N20.CNhs11112.824-19H115.72
spleen, neonate N25.CNhs11099.1354-25G316.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C613.77
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C911.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D312.16
stomach, adult.CNhs10503.33-1H610.50
stomach, embryo E12.CNhs10588.356-43E316.29
stomach, embryo E15.CNhs10603.1252-16G815.86
stomach, embryo E16.CNhs11022.459-17D415.44
stomach, embryo E17.CNhs11006.1035-18D513.59
stomach, embryo E18.CNhs10999.1286-20C613.32
stomach, neonate N03.CNhs11193.1340-24B814.84
stomach, neonate N07.CNhs11210.718-18A913.22
stomach, neonate N25.CNhs11104.1355-25E410.73
stomach, neonate N30.CNhs11134.1386-42I112.31
submandibular gland, adult.CNhs10469.59-29C111.18
testis, adult.CNhs10504.57-7G540.59
testis, embryo E13.CNhs11031.389-23F520.78
testis, embryo E15.CNhs11034.443-27C519.36
testis, embryo E16.CNhs11033.470-26G522.36
testis, embryo E17.CNhs11029.486-18I520.02
testis, embryo E18.CNhs11027.503-18G523.32
testis, neonate N00.CNhs11189.1300-22B721.24
testis, neonate N07.CNhs11222.726-26I422.79
testis, neonate N10.CNhs11204.763-44D933.35
testis, neonate N20.CNhs11110.839-18H335.51
testis, neonate N30.CNhs11130.1391-42E231.40
thymus, adult.CNhs10471.38-12B525.91
thymus, embryo E14.CNhs11041.402-44I412.37
thymus, embryo E15.CNhs11005.430-45I213.87
thymus, embryo E16.CNhs11002.456-26C516.11
thymus, embryo E17.CNhs10581.478-18C118.26
thymus, embryo E18.CNhs10595.1273-19G419.27
thymus, neonate N02.CNhs11181.1541-43F819.35
thymus, neonate N03.CNhs11137.2104-43C715.95
thymus, neonate N06.CNhs11197.681-26C416.15
thymus, neonate N07.CNhs11211.713-19D317.76
thymus, neonate N10.CNhs11194.748-24E419.66
thymus, neonate N20.CNhs11186.820-7A224.07
thymus, neonate N25.CNhs11125.1362-25G722.99
thymus, neonate N30.CNhs11132.1393-42G220.57
tongue, adult.CNhs10499.32-1B417.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H330.41
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F723.77
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G519.47
urinary bladder, adult.CNhs10481.879-12E410.43
uterus, adult pregnant day19.CNhs10497.590-15F515.58
uterus, adult.CNhs10509.92-27E515.75
vagina, adult.CNhs10502.89-27D514.79
vesicular gland, adult.CNhs10491.51-27F816.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A125.98
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A229.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A329.79
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D734.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A421.24
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A522.66
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A619.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A727.92
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A826.28
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A926.41
whole body, embryo E11.CNhs11014.324-5I814.12
whole body, embryo E12.CNhs10587.857-27C914.76
whole body, embryo E13.CNhs10512.372-23H221.34
whole body, embryo E14.5.CNhs10578.420-27D216.29
whole body, embryo E14.CNhs10519.395-14B117.19
whole body, embryo E16.CNhs10514.453-14F214.52
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G513.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G514.76
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G511.37
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.90
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G514.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.70
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.92
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G514.70
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G516.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G516.57
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.63
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G516.33
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.40
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G514.68
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G514.72
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G515.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.26
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.71
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G515.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G517.24
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G512.28
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.03
whole body, embryo E17.5.CNhs10513.490-9F914.47
whole body, embryo E17.CNhs10517.475-3I521.98
whole body, embryo E18.CNhs10516.493-3B317.54
whole body, neonate N00.CNhs10525.657-19C221.27
whole body, neonate N01.CNhs10576.659-23C611.09
whole body, neonate N06.CNhs10515.692-21D113.68
whole body, neonate N10.CNhs10518.761-6B412.98





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.72e-0833
neuronal stem cell1.72e-0833
neuroblast1.72e-0833
electrically signaling cell1.72e-0833
neural cell1.08e-0743
ectodermal cell1.98e-0744
neurectodermal cell1.98e-0744

Uber anatomy
Ontology termp-valuen
nervous system2.54e-1775
central nervous system2.90e-1773
ectoderm-derived structure7.73e-1695
ectoderm7.73e-1695
presumptive ectoderm7.73e-1695
regional part of nervous system1.08e-1354
neural tube5.54e-1352
neural rod5.54e-1352
future spinal cord5.54e-1352
neural keel5.54e-1352
neurectoderm1.37e-1264
neural plate1.37e-1264
presumptive neural plate1.37e-1264
brain2.91e-1247
future brain2.91e-1247
anterior neural tube7.18e-1240
regional part of forebrain7.42e-1239
forebrain7.42e-1239
future forebrain7.42e-1239
regional part of brain8.23e-1246
ecto-epithelium1.76e-1173
gray matter1.87e-1134
pre-chordal neural plate5.23e-1149
brain grey matter1.05e-1029
regional part of telencephalon1.05e-1029
telencephalon1.05e-1029
structure with developmental contribution from neural crest6.81e-1092
cerebral cortex2.03e-0821
cerebral hemisphere2.03e-0821
pallium2.03e-0821
regional part of cerebral cortex5.79e-0717
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