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FFCP PHASE1:Mm9::chr3:127201904..127201956,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:127201904..127201956,-
|DHSsupport=NA
|short_description=p1@Gm4392
|DPIdataset=NA
|description=CAGE_peak_1_at_Gm4392_5end
|association_with_transcript=0bp_to_ENSMUST00000104965_5end
|EntrezGene=100043364
|EntrezGene=100043364
|HGNC=
|HGNC=
|MCL_coexpression_id=1163
|TSSclassifier=NA
|UniProt=F6SUK2
|UniProt=F6SUK2
|association_with_transcript=0bp_to_ENSMUST00000104965_5end
|cluster_id=chr3:127201904..127201956,-
|description=CAGE_peak_1_at_Gm4392_5end
|id=chr3:127201904..127201956,-
|ontology_enrichment_celltype=CL:0000540!2.10e-07!33;CL:0000047!2.10e-07!33;CL:0000031!2.10e-07!33;CL:0000404!2.10e-07!33;CL:0000117!6.06e-07!23;CL:0000337!6.06e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.61e-07,23;CL:0000337,1.61e-07,23;CL:0000540,2.55e-07,33;CL:0000047,2.55e-07,33;CL:0000031,2.55e-07,33;CL:0000404,2.55e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!6.06e-14!71;UBERON:0003075!6.06e-14!71;UBERON:0007284!6.06e-14!71;UBERON:0001017!3.03e-12!73;UBERON:0005743!3.03e-12!73;UBERON:0000073!6.21e-12!75;UBERON:0001016!6.21e-12!75;UBERON:0004121!6.57e-12!102;UBERON:0000924!6.57e-12!102;UBERON:0006601!6.57e-12!102;UBERON:0001049!1.60e-11!52;UBERON:0005068!1.60e-11!52;UBERON:0006241!1.60e-11!52;UBERON:0007135!1.60e-11!52;UBERON:0002020!7.07e-11!34;UBERON:0000955!1.31e-09!50;UBERON:0006238!1.31e-09!50;UBERON:0000468!1.31e-09!333;UBERON:0002616!2.55e-09!49;UBERON:0000033!6.31e-08!63;UBERON:0002791!6.70e-08!29;UBERON:0003528!6.70e-08!29;UBERON:0001893!6.70e-08!29;UBERON:0000025!9.36e-08!114;UBERON:0003080!4.67e-07!40
|ontology_enrichment_uberon_v019_2=UBERON:0010314,5.09e-19,92;UBERON:0000073,5.78e-13,54;UBERON:0001017,2.50e-12,73;UBERON:0001049,2.72e-12,52;UBERON:0005068,2.72e-12,52;UBERON:0006241,2.72e-12,52;UBERON:0007135,2.72e-12,52;UBERON:0001016,8.84e-12,75;UBERON:0002020,1.33e-11,34;UBERON:0002346,1.47e-11,64;UBERON:0003075,1.47e-11,64;UBERON:0007284,1.47e-11,64;UBERON:0010371,5.29e-09,73;UBERON:0000955,5.71e-09,47;UBERON:0006238,5.71e-09,47;UBERON:0002616,1.16e-08,46;UBERON:0004121,2.15e-08,95;UBERON:0000924,2.15e-08,95;UBERON:0006601,2.15e-08,95;UBERON:0003528,2.44e-08,29;UBERON:0002791,2.44e-08,29;UBERON:0001893,2.44e-08,29;UBERON:0000025,1.12e-07,114;UBERON:0003080,1.82e-07,40;UBERON:0002780,5.40e-07,39;UBERON:0001890,5.40e-07,39;UBERON:0006240,5.40e-07,39;UBERON:0002021,9.30e-07,10;UBERON:0000411,9.30e-07,10;UBERON:0001950,9.30e-07,10;UBERON:0004111,9.52e-07,122
|phase1_expression=1.12104192973356,0,0,0,0,0.503637815735669,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.411343300817216,0,3.40173160604279,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0.218025156380447,0.439372365468944,0.194429899074283,0.839918529752175,0,0,0,0,0,0.286533439938757,0.515672092277442,2.83243045203437,2.11596391708813,3.1691570175309,0.677689064138264,0.889294796111139,0,0,0,0.299600110518405,0,2.28117147078651,3.10513658162888,2.73422449756797,25.9942395807461,26.9459619960969,2.69479758272899,2.87536413054709,2.75765635983006,15.4162233399144,10.214987046815,13.8245879930619,3.03338461779446,4.48289453651807,2.6045668527838,14.2383329490704,8.4414391504752,11.3070703354839,43.6050306501028,33.4573449877892,20.1311401491325,0.605809546665472,1.20914496170857,0,0,0,0.539703191637817,0,0,2.10666630197628,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,11.1331604298619,5.37804512975021,15.2232739156071,13.6063143381075,13.565037649736,19.6373140916627,8.04266184509923,0,4.19338135067744,2.65383165584962,10.676612096529,3.97514733228708,4.363877278217,0,12.5895742714965,5.23616767033638,0.510914110417183,0,0,0,16.926342252745,13.2675174817402,6.15706325353036,19.1206752211504,13.2972037811772,14.1295870300501,13.3037835715561,3.05518091550949,2.61254638281195,4.0435641349388,1.68353484709179,0,1.14951052216736,0.720248519221397,1.80845781402858,1.97305847538851,1.5373646434182,0.843315521037559,2.84573707812917,0,0.378212160335639,0.527853372491847,1.09597866213787,0.278047249225598,6.268538997399,1.85203922767149,1.19420560091096,0,0,0,1.03562886267751,1.87620847984877,1.98068267607116,3.07768156260773,6.68998387941173,9.87309522479221,17.9051137457814,18.2425912951741,17.1645053279739,17.9370236405694,18.3867559768587,26.1041566737655,22.2223980886505,26.5655639502171,22.9492976080236,10.9350773253346,8.02655976558419,0,0.264450566663544,1.49301775374664,3.25131340604614,3.22168653305233,2.8235693447268,3.11329261382818,2.09248188723815,0,2.9645811850322,2.26201687920243,2.58643413653496,2.14460495831032,0.898819408654221,1.08069024937347,0.597423819763102,0.569003702859245,1.48523066392647,0,1.22190796707189,0.581857461502877,1.05203729835478,0.316182685621286,0.147610147979602,0,0,0.296452627087149,0.333690211432188,0.196558995113203,0.224862112384854,1.01430060694251,0.241177159752417,0.50925170356284,0,0.810676133875177,0.823684239564244,2.87536413054709,0.744281895337007,2.18426371180192,0,0.538192240565737,0,0,1.13694847062291,2.28150967018836,2.20668611507745,0.704070744865506,3.68513766371995,4.76087281772027,3.12213836572478,8.03939234941574,6.86540537911202,6.05928120898451,0.491589944147214,0.518054945597687,0.289298117163023,0,0,0.983528546038072,0.827810238914197,38.8532427770457,34.5774475446999,0,8.33154059774431,7.57219726599016,12.1036010731958,11.2020166821055,0.238968797952552,0.668396022247182,0.849229592366497,7.69140333182299,7.89090816360542,12.2539211163422,10.6036034419196,1.41940085208269,2.31485284767432,2.60619134965722,1.64970122972535,0,0.728341908464944,0.906970670894253,0.754420319023592,1.47650946440386,1.22974059177571,2.58428293168221,0,0.712994756769443,0,0,0,1.36175842301515,0,0.258717367565509,0.214337035031592,1.24138163549592,1.07021290561242,1.64549020602121,1.2178597964584,3.75474732901937,2.96564899209348,1.32317038832977,0.65954501176592,3.55221738730992,1.86970067277283,0.835606408021955,0.164140899745061,0.291480836629851,53.5879122810373,0.341741761595705,0.206386867963223,0.555583582109135,0.753473828018764,0.683471138605126,0.686334519619568,0,0,0,0.954670618015114,1.73984796469624,2.43983360552218,2.16010681643603,1.88179466413022,3.27543845619266,2.15782954215713,2.23164330458407,1.30877970992015,0.518459893167171,0,0.56369293868419,0.747582730219894,0.66183396182839,1.75006069509643,1.16243841129958,0.844780627453891,1.17357238645754,0.651021924219751,0.524296722128554,0.483168241652012,1.44015003128933,0.316011120628178,0.405450430580328,0.718976700153791,0,0.358053391334963,0.198681354781265,0.240390899039938,0.443068581523732,0,0.304827226619999,0,0.584747284438515,0,0.350630706544707,18.8186218400625,0.665957860122194,0.358855426437903,0.671538465456314,0.579568782096571,1.50145980360946,1.09890974560359,0,0,24.2843292325339,19.7939851698086,25.2074025913335,11.8578695817144,15.7568979547248,21.9064230243013,16.8755625057951,9.45674526770863,15.406841905463,9.31968561153276,1.55681021376265,2.79317411380722,3.75613932659095,9.23805524859517,2.93458427679175,6.80220981265052,10.8900896622791,15.658664350156,17.6505565275498,12.3821633764261,15.2087579934144,15.4673599936582,10.3005658216871,11.5885525852813,13.0952869218798,12.3836359733599,12.5155072020444,10.6100071255038,13.1867488257058,10.4511233295422,15.4291163573437,14.198064492747,12.8755542571553,13.6625631634389,11.104906889009,13.3691080468849,11.7073902638574,15.5211129748327,12.3581743599734,22.4456908663095,12.6939469392866,11.2295109908142,12.2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|phase1_expression=1.12104192973356,0,0,0,0,0.503637815735669,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.411343300817216,0,3.40173160604279,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0.218025156380447,0.439372365468944,0.194429899074283,0.839918529752175,0,0,0,0,0,0.286533439938757,0.515672092277442,2.83243045203437,2.11596391708813,3.1691570175309,0.677689064138264,0.889294796111139,0,0,0,0.299600110518405,0,2.28117147078651,3.10513658162888,2.73422449756797,25.9942395807461,26.9459619960969,2.69479758272899,2.87536413054709,2.75765635983006,15.4162233399144,10.214987046815,13.8245879930619,3.03338461779446,4.48289453651807,2.6045668527838,14.2383329490704,8.4414391504752,11.3070703354839,43.6050306501028,33.4573449877892,20.1311401491325,0.605809546665472,1.20914496170857,0,0,0,0.539703191637817,0,0,2.10666630197628,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,11.1331604298619,5.37804512975021,15.2232739156071,13.6063143381075,13.565037649736,19.6373140916627,8.04266184509923,0,4.19338135067744,2.65383165584962,10.676612096529,3.97514733228708,4.363877278217,0,12.5895742714965,5.23616767033638,0.510914110417183,0,0,0,16.926342252745,13.2675174817402,6.15706325353036,19.1206752211504,13.2972037811772,14.1295870300501,13.3037835715561,3.05518091550949,2.61254638281195,4.0435641349388,1.68353484709179,0,1.14951052216736,0.720248519221397,1.80845781402858,1.97305847538851,1.5373646434182,0.843315521037559,2.84573707812917,0,0.378212160335639,0.527853372491847,1.09597866213787,0.278047249225598,6.268538997399,1.85203922767149,1.19420560091096,0,0,0,1.03562886267751,1.87620847984877,1.98068267607116,3.07768156260773,6.68998387941173,9.87309522479221,17.9051137457814,18.2425912951741,17.1645053279739,17.9370236405694,18.3867559768587,26.1041566737655,22.2223980886505,26.5655639502171,22.9492976080236,10.9350773253346,8.02655976558419,0,0.264450566663544,1.49301775374664,3.25131340604614,3.22168653305233,2.8235693447268,3.11329261382818,2.09248188723815,0,2.9645811850322,2.26201687920243,2.58643413653496,2.14460495831032,0.898819408654221,1.08069024937347,0.597423819763102,0.569003702859245,1.48523066392647,0,1.22190796707189,0.581857461502877,1.05203729835478,0.316182685621286,0.147610147979602,0,0,0.296452627087149,0.333690211432188,0.196558995113203,0.224862112384854,1.01430060694251,0.241177159752417,0.50925170356284,0,0.810676133875177,0.823684239564244,2.87536413054709,0.744281895337007,2.18426371180192,0,0.538192240565737,0,0,1.13694847062291,2.28150967018836,2.20668611507745,0.704070744865506,3.68513766371995,4.76087281772027,3.12213836572478,8.03939234941574,6.86540537911202,6.05928120898451,0.491589944147214,0.518054945597687,0.289298117163023,0,0,0.983528546038072,0.827810238914197,38.8532427770457,34.5774475446999,0,8.33154059774431,7.57219726599016,12.1036010731958,11.2020166821055,0.238968797952552,0.668396022247182,0.849229592366497,7.69140333182299,7.89090816360542,12.2539211163422,10.6036034419196,1.41940085208269,2.31485284767432,2.60619134965722,1.64970122972535,0,0.728341908464944,0.906970670894253,0.754420319023592,1.47650946440386,1.22974059177571,2.58428293168221,0,0.712994756769443,0,0,0,1.36175842301515,0,0.258717367565509,0.214337035031592,1.24138163549592,1.07021290561242,1.64549020602121,1.2178597964584,3.75474732901937,2.96564899209348,1.32317038832977,0.65954501176592,3.55221738730992,1.86970067277283,0.835606408021955,0.164140899745061,0.291480836629851,53.5879122810373,0.341741761595705,0.206386867963223,0.555583582109135,0.753473828018764,0.683471138605126,0.686334519619568,0,0,0,0.954670618015114,1.73984796469624,2.43983360552218,2.16010681643603,1.88179466413022,3.27543845619266,2.15782954215713,2.23164330458407,1.30877970992015,0.518459893167171,0,0.56369293868419,0.747582730219894,0.66183396182839,1.75006069509643,1.16243841129958,0.844780627453891,1.17357238645754,0.651021924219751,0.524296722128554,0.483168241652012,1.44015003128933,0.316011120628178,0.405450430580328,0.718976700153791,0,0.358053391334963,0.198681354781265,0.240390899039938,0.443068581523732,0,0.304827226619999,0,0.584747284438515,0,0.350630706544707,18.8186218400625,0.665957860122194,0.358855426437903,0.671538465456314,0.579568782096571,1.50145980360946,1.09890974560359,0,0,24.2843292325339,19.7939851698086,25.2074025913335,11.8578695817144,15.7568979547248,21.9064230243013,16.8755625057951,9.45674526770863,15.406841905463,9.31968561153276,1.55681021376265,2.79317411380722,3.75613932659095,9.23805524859517,2.93458427679175,6.80220981265052,10.8900896622791,15.658664350156,17.6505565275498,12.3821633764261,15.2087579934144,15.4673599936582,10.3005658216871,11.5885525852813,13.0952869218798,12.3836359733599,12.5155072020444,10.6100071255038,13.1867488257058,10.4511233295422,15.4291163573437,14.198064492747,12.8755542571553,13.6625631634389,11.104906889009,13.3691080468849,11.7073902638574,15.5211129748327,12.3581743599734,22.4456908663095,12.6939469392866,11.2295109908142,12.2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|short_description=p1@Gm4392
}}
}}

Latest revision as of 14:03, 1 October 2015

Short description:p1@Gm4392
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gm4392_5end
Coexpression cluster:MCL_coexpression_mm9:1163
Association with transcript: 0bp_to_ENSMUST00000104965_5end
EntrezGene:Gm4392
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gm4392

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.28
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.11
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F125.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D526.95
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.88
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.82
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E414.24
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D643.61
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F633.46
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E120.13
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F91.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D711.13
adrenal gland, embryo E14.CNhs11038.406-44C55.38
adrenal gland, embryo E16.CNhs11004.1254-43D615.22
adrenal gland, embryo E17.CNhs11043.1263-45I113.61
adrenal gland, embryo E18.CNhs11026.1262-18F513.57
adrenal gland, neonate N00.CNhs11191.1311-23C119.64
adrenal gland, neonate N25.CNhs11223.1377-27I38.04
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H14.19
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F510.68
bone (os femoris), neonate N16.CNhs11225.1525-43A63.98
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B212.59
cerebellum, neonate N30.CNhs11135.1395-42I25.24
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A416.93
corpus striatum, adult.CNhs10487.19-21D813.27
corpus striatum, neonate N00.CNhs11226.630-43F16.16
cortex, adult.CNhs10473.12-14D519.12
cortex, neonate N30.CNhs11107.1392-42F213.30
diencephalon, adult.CNhs10482.20-12F214.13
diencephalon, neonate N30.CNhs11201.1388-42B213.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.61
epididymis, adult.CNhs10490.58-23B24.04
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C61.97
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C46.27
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D43.08
heart, embryo E15.CNhs11017.431-16C86.69
heart, embryo E16.CNhs11021.457-17C69.87
heart, embryo E17.CNhs11025.479-18E517.91
heart, embryo E18.CNhs11030.1283-20G318.24
heart, neonate N00.CNhs11213.639-21E317.16
heart, neonate N03.CNhs11221.1349-25I217.94
heart, neonate N10.CNhs11118.749-24G118.39
heart, neonate N16.CNhs11209.782-15G126.10
heart, neonate N20.CNhs11127.821-26I622.22
heart, neonate N25.CNhs11196.1351-25D326.57
heart, neonate N30.CNhs11202.1390-42D222.95
hippocampus, adult.CNhs10478.13-16E810.94
hippocampus, neonate N00.CNhs11228.627-43G18.03
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D53.25
intestine, embryo E15.CNhs10602.976-16D83.22
intestine, embryo E16.CNhs10585.463-22H42.82
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E92.96
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F22.59
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.49
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G71.05
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F82.28
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A63.69
lung, embryo E18.CNhs10583.1287-20I64.76
lung, neonate N00.CNhs11224.640-42C63.12
lung, neonate N06.CNhs11212.683-20E58.04
lung, neonate N07.CNhs11111.715-19A36.87
lung, neonate N10.CNhs11219.750-23E66.06
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C238.85
medulla oblongata, neonate N30.CNhs11200.1396-42A334.58
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.33
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.57
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.10
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E311.20
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.69
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.89
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D612.25
olfactory brain, adult.CNhs10489.18-22I910.60
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H72.31
ovary, neonate N00.CNhs11217.1299-22I42.61
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G92.58
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I73.75
placenta, adult pregnant day17.CNhs10464.577-18G32.97
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G43.55
skin, neonate N03.CNhs11215.662-22H31.87
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C953.59
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.74
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D42.16
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C63.28
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A92.23
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B418.82
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A124.28
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A219.79
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A325.21
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A521.91
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.88
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A815.41
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.32
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H23.76
whole body, embryo E14.5.CNhs10578.420-27D29.24
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F26.80
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G515.66
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G517.65
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G512.38
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G515.21
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.47
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.59
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.52
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.19
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.45
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G515.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.20
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.88
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G513.66
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.10
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.37
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.71
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G515.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G522.45
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.23
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G512.28
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.00
whole body, embryo E17.5.CNhs10513.490-9F910.80
whole body, embryo E17.CNhs10517.475-3I55.75
whole body, embryo E18.CNhs10516.493-3B311.93
whole body, neonate N00.CNhs10525.657-19C29.67
whole body, neonate N01.CNhs10576.659-23C614.35
whole body, neonate N06.CNhs10515.692-21D17.94
whole body, neonate N10.CNhs10518.761-6B47.19





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.61e-0723
neuroblast (sensu Vertebrata)1.61e-0723
neuron2.55e-0733
neuronal stem cell2.55e-0733
neuroblast2.55e-0733
electrically signaling cell2.55e-0733

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest5.09e-1992
regional part of nervous system5.78e-1354
central nervous system2.50e-1273
neural tube2.72e-1252
neural rod2.72e-1252
future spinal cord2.72e-1252
neural keel2.72e-1252
nervous system8.84e-1275
gray matter1.33e-1134
neurectoderm1.47e-1164
neural plate1.47e-1164
presumptive neural plate1.47e-1164
ecto-epithelium5.29e-0973
brain5.71e-0947
future brain5.71e-0947
regional part of brain1.16e-0846
ectoderm-derived structure2.15e-0895
ectoderm2.15e-0895
presumptive ectoderm2.15e-0895
brain grey matter2.44e-0829
regional part of telencephalon2.44e-0829
telencephalon2.44e-0829
tube1.12e-07114
anterior neural tube1.82e-0740
regional part of forebrain5.40e-0739
forebrain5.40e-0739
future forebrain5.40e-0739
occipital lobe9.30e-0710
visual cortex9.30e-0710
neocortex9.30e-0710
anatomical conduit9.52e-07122
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