FFCP PHASE1:Mm9::chrX:131252482..131252557,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=78248 | |EntrezGene=78248 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=361 | |||
|TSSclassifier=NA | |||
|UniProt=Q9CX83 | |UniProt=Q9CX83 | ||
|association_with_transcript=0bp_to_ENSMUST00000035748,ENSMUST00000051256,ENSMUST00000113198,ENSMUST00000113199,ENSMUST00000113201,ENSMUST00000125684,ENSMUST00000129697,ENSMUST00000138421_5end | |association_with_transcript=0bp_to_ENSMUST00000035748,ENSMUST00000051256,ENSMUST00000113198,ENSMUST00000113199,ENSMUST00000113201,ENSMUST00000125684,ENSMUST00000129697,ENSMUST00000138421_5end | ||
|cluster_id=chrX:131252482..131252557,+ | |||
|description=CAGE_peak_1_at_Armcx1_5end | |description=CAGE_peak_1_at_Armcx1_5end | ||
|id=chrX:131252482..131252557,+ | |id=chrX:131252482..131252557,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.85e-16!71;UBERON:0003075!2.85e-16!71;UBERON:0007284!2.85e-16!71;UBERON:0000033!4.49e-16!63;UBERON:0001017!5.25e-15!73;UBERON:0005743!5.25e-15!73;UBERON:0000955!1.34e-14!50;UBERON:0006238!1.34e-14!50;UBERON:0001049!1.81e-14!52;UBERON:0005068!1.81e-14!52;UBERON:0006241!1.81e-14!52;UBERON:0007135!1.81e-14!52;UBERON:0000073!2.63e-14!75;UBERON:0001016!2.63e-14!75;UBERON:0004121!4.19e-14!102;UBERON:0000924!4.19e-14!102;UBERON:0006601!4.19e-14!102;UBERON:0002616!4.54e-14!49;UBERON:0003056!3.11e-13!49;UBERON:0003080!2.80e-11!40;UBERON:0000025!8.37e-11!114;UBERON:0002780!1.13e-10!39;UBERON:0001890!1.13e-10!39;UBERON:0006240!1.13e-10!39;UBERON:0004111!7.48e-10!122;UBERON:0000468!2.46e-09!333;UBERON:0002020!5.28e-09!34;UBERON:0000153!2.25e-08!94;UBERON:0002791!1.50e-07!29;UBERON:0003528!1.50e-07!29;UBERON:0001893!1.50e-07!29;UBERON:0000922!2.80e-07!328;UBERON:0002021!3.05e-07!10;UBERON:0000411!3.05e-07!10;UBERON:0001950!3.05e-07!10;UBERON:0007811!9.17e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.59e-18,92;UBERON:0002346,5.87e-17,64;UBERON:0003075,5.87e-17,64;UBERON:0007284,5.87e-17,64;UBERON:0010371,5.58e-16,73;UBERON:0000073,1.04e-15,54;UBERON:0001017,5.17e-15,73;UBERON:0001049,1.79e-14,52;UBERON:0005068,1.79e-14,52;UBERON:0006241,1.79e-14,52;UBERON:0007135,1.79e-14,52;UBERON:0001016,2.59e-14,75;UBERON:0004121,2.88e-14,95;UBERON:0000924,2.88e-14,95;UBERON:0006601,2.88e-14,95;UBERON:0003056,3.07e-13,49;UBERON:0000955,9.00e-13,47;UBERON:0006238,9.00e-13,47;UBERON:0002616,2.93e-12,46;UBERON:0003080,2.77e-11,40;UBERON:0000025,8.55e-11,114;UBERON:0002780,1.12e-10,39;UBERON:0001890,1.12e-10,39;UBERON:0006240,1.12e-10,39;UBERON:0004111,7.63e-10,122;UBERON:0002020,5.23e-09,34;UBERON:0003528,1.49e-07,29;UBERON:0002791,1.49e-07,29;UBERON:0001893,1.49e-07,29;UBERON:0002021,3.03e-07,10;UBERON:0000411,3.03e-07,10;UBERON:0001950,3.03e-07,10;UBERON:0000922,9.31e-07,320 | |||
|phase1_expression=43.4003375653992,0.697950815278722,0.909998478779072,0.30246421130683,0.500895729946347,3.69334398206158,3.73780224952841,4.39019299701359,0.422366166455,0.468129052643987,0,0.0797721589953364,1.36960583944965,1.04904482902797,2.33176833270964,0.809901069559304,1.39912375625629,0,0.274228867211478,0.42438965179803,22.7916017604867,0.595745707205312,0.261199789138935,2.3998863419011,2.75291137280604,1.72269589234506,0,1.72376986148711,0.760093677825496,1.00812051903972,1.55211357458713,3.17515336729816,1.23012957516914,0,4.33277429626912,2.99222361645286,3.26670970019791,0.418531630736908,0,0.523523743973798,0,0,0,39.1539103904045,35.6846797892691,41.1144724842167,7.82391344348039,3.05235218932625,2.85592037554813,5.05517737593137,5.31948402176378,2.87505128729943,0,1.45072428402269,1.68046899571232,20.5807548828758,27.2206767941819,25.2679325215947,21.8501777728366,29.0945038599618,18.3811107016792,5.08266798103698,3.55717918444456,1.3498495759221,1.97773272513395,0.7104801149461,1.79760066311043,2.30530983192933,19.9084055632277,19.7108669964268,17.0363218694619,20.5668708770739,32.025938437984,19.2310554767478,17.0604938412461,20.2228133054205,94.6996576594743,64.2267310568494,78.9537580937091,25.849712395118,27.7207560115301,32.8175423450759,44.1109138422182,59.0900740533264,64.3280623140371,68.3538318298909,54.1012387036591,42.6854730939938,8.25415507331706,15.492169821891,35.3634676216047,18.0689014166091,0,1.61910957491345,1.29955283489534,0.896053774194671,10.2524426696179,21.8150812899914,19.4839503452152,16.9602995764963,31.2672391904231,14.115912515575,0,7.11066703153331,2.81438353314578,1.52015919285059,2.02209778005913,8.67797485864856,10.616453229534,19.7428044956217,20.8182392119363,22.5304453950985,21.4472412448134,29.3909149077614,28.4564671268406,15.5826573248798,9.39340877390621,10.9895511259133,5.30766331169925,22.9708926925321,9.05450225687614,9.69750506270444,1.86391761218122,59.1417209963325,50.0577629284158,2.29911349687732,2.75574786363617,2.99951365496704,2.54140454146129,82.2350610332477,59.0175777636028,41.717244901471,86.3906871355614,74.9246289977868,74.3881199523225,72.1973620651521,34.6253837091075,23.7617313865278,42.4574234168574,13.6787206326208,32.1397494117878,33.1059030384201,30.7906241967147,43.2522827188502,35.7871985535985,45.0960295402671,29.6097449608743,33.372734825333,18.1077114063587,38.0103221137317,45.9232434067907,37.2632745126877,49.4924103621564,35.8699731517832,46.0951985553793,39.2097505632432,2.1066395619397,1.28673953557358,2.27330799516474,30.6546143352543,38.2277477769187,36.012412292203,31.7237945684182,36.9916755685119,44.1203942857902,34.18248987831,29.2418007525585,21.368057653192,25.013097186849,28.0726363575253,10.9442892886905,13.5965988305559,12.5143565715899,12.0785776884335,66.031043849136,43.8373648735752,0.660837565967596,1.85115396664481,43.2975148586525,40.4091809037163,26.9332994163175,23.7986559055544,22.9049385160216,15.5985013412299,5.69434873853414,9.0584425098206,18.0961350336194,11.7384318504279,14.622306533934,8.98819408654222,4.32276099749388,6.37252074413975,12.3284135619503,31.3040924550657,18.0332377076929,33.3988177666315,27.5412531778029,21.0407459670956,23.5239918102237,15.7942858338174,19.7818397080132,11.4759362447274,4.15033677922008,7.00749444007595,8.64859578498093,4.72210436008193,5.68008339887808,5.54707467430559,10.4396599230382,8.0554918486227,5.83686816390127,4.94210543738547,14.3768206527355,15.6299198020771,10.6092808858951,7.57736633841335,4.66433275156972,6.27176577772377,22.5398892003258,27.4762547067203,29.3336957595647,27.8381940671309,28.6322102911973,29.3135950523178,21.9000149615133,25.5625078693716,42.7191240527778,36.3202091023991,37.312415865852,28.0206268163912,34.5369963731791,31.2441966536065,3.01582567878545,0,10.3270497333998,19.3155722413313,93.6009939628827,91.0734804821419,29.6722251131783,9.3414243065618,23.347608236803,27.7211508450613,37.6990946032398,21.5071918157297,29.6322236529584,23.4953520554731,22.6693992937941,30.1023533648651,33.994748903401,51.0900893110673,21.4329528664486,37.7499079774581,29.4825396429973,23.2607873391275,2.65490276679926,32.2898246086125,21.7672961014621,29.4223924419201,17.1275097870848,22.7502009478506,19.898978573953,31.2639007350655,27.0938007572388,15.485801138855,10.5418608574999,12.3762651897824,66.3857231219887,37.0925853704499,23.8019978160268,32.1505552547388,38.8375111676579,49.4081624757735,42.7827453565515,15.8321773539592,7.50949465803873,10.1679394014634,14.5548742716275,14.5099902588502,23.5738062976022,20.3254557007885,18.9802026964987,16.5782308742512,7.57850175237612,79.7328798645192,4.27177201994632,31.7835776663363,22.9641213938442,10.1718966782533,4.78429797023588,4.57556346413045,10.1987057996313,13.5752908753948,8.98299829728755,8.59203556213602,29.1029114094645,29.4813227333931,30.997532815857,26.5542135938375,21.8362563746178,19.9599232649535,17.2745722465952,13.6113089831695,5.4438288782553,3.72803587852155,2.81846469342095,45.7520630894575,36.0699509196473,38.5013352921214,29.7067593998782,42.5769436236761,32.8600268208111,32.8115049806754,20.5524315074393,6.52277126230216,6.62469014393091,7.58426689507628,16.4207424385033,23.9316530194047,12.2125573599127,9.667441566044,11.3248372225321,8.05309511783791,7.67985541307802,11.9140410938814,9.22102360525498,7.9652686258104,8.1864619821392,9.1401249558313,11.3370595116122,7.02864189207155,0,0.179427713218951,1.00730769818447,12.9437028001568,14.8269155606434,21.42874003927,9.86094543763703,3.51100472824754,64.3817100583456,63.9852078744976,64.1642975052124,53.9618992559179,61.6574267793578,49.1006033303305,57.3769125197035,79.2565317674628,72.9559278464569,67.8266008394884,36.1179969592935,21.1483182902546,39.0979957176967,39.3832881650636,37.7303692730368,27.3926827590521,29.7810615254164,28.4328378989674,29.8454864920388,29.0601793528367,31.9383917861702,29.802961939,28.1860937484346,28.3631425153571,29.9238793258745,26.6724467118521,29.8981560937727,27.0072908649187,28.8460130562315,32.972558110105,34.9726637433124,31.4132176902027,27.1817256539946,36.7726434079791,34.6322519928417,33.7612285487789,30.1831155240075,29.9899471039141,34.4942449168489,25.812544496256,26.0997039873183,27.4827505827822,20.8707832016542,26.6491366839861,27.7785519812844,23.4821943261669,31.3468355316847,24.495300161506,21.4242931917105,23.8238732649077,21.5637087126992 | |phase1_expression=43.4003375653992,0.697950815278722,0.909998478779072,0.30246421130683,0.500895729946347,3.69334398206158,3.73780224952841,4.39019299701359,0.422366166455,0.468129052643987,0,0.0797721589953364,1.36960583944965,1.04904482902797,2.33176833270964,0.809901069559304,1.39912375625629,0,0.274228867211478,0.42438965179803,22.7916017604867,0.595745707205312,0.261199789138935,2.3998863419011,2.75291137280604,1.72269589234506,0,1.72376986148711,0.760093677825496,1.00812051903972,1.55211357458713,3.17515336729816,1.23012957516914,0,4.33277429626912,2.99222361645286,3.26670970019791,0.418531630736908,0,0.523523743973798,0,0,0,39.1539103904045,35.6846797892691,41.1144724842167,7.82391344348039,3.05235218932625,2.85592037554813,5.05517737593137,5.31948402176378,2.87505128729943,0,1.45072428402269,1.68046899571232,20.5807548828758,27.2206767941819,25.2679325215947,21.8501777728366,29.0945038599618,18.3811107016792,5.08266798103698,3.55717918444456,1.3498495759221,1.97773272513395,0.7104801149461,1.79760066311043,2.30530983192933,19.9084055632277,19.7108669964268,17.0363218694619,20.5668708770739,32.025938437984,19.2310554767478,17.0604938412461,20.2228133054205,94.6996576594743,64.2267310568494,78.9537580937091,25.849712395118,27.7207560115301,32.8175423450759,44.1109138422182,59.0900740533264,64.3280623140371,68.3538318298909,54.1012387036591,42.6854730939938,8.25415507331706,15.492169821891,35.3634676216047,18.0689014166091,0,1.61910957491345,1.29955283489534,0.896053774194671,10.2524426696179,21.8150812899914,19.4839503452152,16.9602995764963,31.2672391904231,14.115912515575,0,7.11066703153331,2.81438353314578,1.52015919285059,2.02209778005913,8.67797485864856,10.616453229534,19.7428044956217,20.8182392119363,22.5304453950985,21.4472412448134,29.3909149077614,28.4564671268406,15.5826573248798,9.39340877390621,10.9895511259133,5.30766331169925,22.9708926925321,9.05450225687614,9.69750506270444,1.86391761218122,59.1417209963325,50.0577629284158,2.29911349687732,2.75574786363617,2.99951365496704,2.54140454146129,82.2350610332477,59.0175777636028,41.717244901471,86.3906871355614,74.9246289977868,74.3881199523225,72.1973620651521,34.6253837091075,23.7617313865278,42.4574234168574,13.6787206326208,32.1397494117878,33.1059030384201,30.7906241967147,43.2522827188502,35.7871985535985,45.0960295402671,29.6097449608743,33.372734825333,18.1077114063587,38.0103221137317,45.9232434067907,37.2632745126877,49.4924103621564,35.8699731517832,46.0951985553793,39.2097505632432,2.1066395619397,1.28673953557358,2.27330799516474,30.6546143352543,38.2277477769187,36.012412292203,31.7237945684182,36.9916755685119,44.1203942857902,34.18248987831,29.2418007525585,21.368057653192,25.013097186849,28.0726363575253,10.9442892886905,13.5965988305559,12.5143565715899,12.0785776884335,66.031043849136,43.8373648735752,0.660837565967596,1.85115396664481,43.2975148586525,40.4091809037163,26.9332994163175,23.7986559055544,22.9049385160216,15.5985013412299,5.69434873853414,9.0584425098206,18.0961350336194,11.7384318504279,14.622306533934,8.98819408654222,4.32276099749388,6.37252074413975,12.3284135619503,31.3040924550657,18.0332377076929,33.3988177666315,27.5412531778029,21.0407459670956,23.5239918102237,15.7942858338174,19.7818397080132,11.4759362447274,4.15033677922008,7.00749444007595,8.64859578498093,4.72210436008193,5.68008339887808,5.54707467430559,10.4396599230382,8.0554918486227,5.83686816390127,4.94210543738547,14.3768206527355,15.6299198020771,10.6092808858951,7.57736633841335,4.66433275156972,6.27176577772377,22.5398892003258,27.4762547067203,29.3336957595647,27.8381940671309,28.6322102911973,29.3135950523178,21.9000149615133,25.5625078693716,42.7191240527778,36.3202091023991,37.312415865852,28.0206268163912,34.5369963731791,31.2441966536065,3.01582567878545,0,10.3270497333998,19.3155722413313,93.6009939628827,91.0734804821419,29.6722251131783,9.3414243065618,23.347608236803,27.7211508450613,37.6990946032398,21.5071918157297,29.6322236529584,23.4953520554731,22.6693992937941,30.1023533648651,33.994748903401,51.0900893110673,21.4329528664486,37.7499079774581,29.4825396429973,23.2607873391275,2.65490276679926,32.2898246086125,21.7672961014621,29.4223924419201,17.1275097870848,22.7502009478506,19.898978573953,31.2639007350655,27.0938007572388,15.485801138855,10.5418608574999,12.3762651897824,66.3857231219887,37.0925853704499,23.8019978160268,32.1505552547388,38.8375111676579,49.4081624757735,42.7827453565515,15.8321773539592,7.50949465803873,10.1679394014634,14.5548742716275,14.5099902588502,23.5738062976022,20.3254557007885,18.9802026964987,16.5782308742512,7.57850175237612,79.7328798645192,4.27177201994632,31.7835776663363,22.9641213938442,10.1718966782533,4.78429797023588,4.57556346413045,10.1987057996313,13.5752908753948,8.98299829728755,8.59203556213602,29.1029114094645,29.4813227333931,30.997532815857,26.5542135938375,21.8362563746178,19.9599232649535,17.2745722465952,13.6113089831695,5.4438288782553,3.72803587852155,2.81846469342095,45.7520630894575,36.0699509196473,38.5013352921214,29.7067593998782,42.5769436236761,32.8600268208111,32.8115049806754,20.5524315074393,6.52277126230216,6.62469014393091,7.58426689507628,16.4207424385033,23.9316530194047,12.2125573599127,9.667441566044,11.3248372225321,8.05309511783791,7.67985541307802,11.9140410938814,9.22102360525498,7.9652686258104,8.1864619821392,9.1401249558313,11.3370595116122,7.02864189207155,0,0.179427713218951,1.00730769818447,12.9437028001568,14.8269155606434,21.42874003927,9.86094543763703,3.51100472824754,64.3817100583456,63.9852078744976,64.1642975052124,53.9618992559179,61.6574267793578,49.1006033303305,57.3769125197035,79.2565317674628,72.9559278464569,67.8266008394884,36.1179969592935,21.1483182902546,39.0979957176967,39.3832881650636,37.7303692730368,27.3926827590521,29.7810615254164,28.4328378989674,29.8454864920388,29.0601793528367,31.9383917861702,29.802961939,28.1860937484346,28.3631425153571,29.9238793258745,26.6724467118521,29.8981560937727,27.0072908649187,28.8460130562315,32.972558110105,34.9726637433124,31.4132176902027,27.1817256539946,36.7726434079791,34.6322519928417,33.7612285487789,30.1831155240075,29.9899471039141,34.4942449168489,25.812544496256,26.0997039873183,27.4827505827822,20.8707832016542,26.6491366839861,27.7785519812844,23.4821943261669,31.3468355316847,24.495300161506,21.4242931917105,23.8238732649077,21.5637087126992 | ||
|short_description=p1@Armcx1 | |short_description=p1@Armcx1 | ||
}} | }} |
Latest revision as of 14:20, 1 October 2015
Short description: | p1@Armcx1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Armcx1_5end |
Coexpression cluster: | MCL_coexpression_mm9:361 |
Association with transcript: | 0bp_to_ENSMUST00000035748, ENSMUST00000051256, ENSMUST00000113198, ENSMUST00000113199, ENSMUST00000113201, ENSMUST00000125684, ENSMUST00000129697, ENSMUST00000138421_5end |
EntrezGene: | Armcx1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 9.59e-18 | 92 |
neurectoderm | 5.87e-17 | 64 |
neural plate | 5.87e-17 | 64 |
presumptive neural plate | 5.87e-17 | 64 |
ecto-epithelium | 5.58e-16 | 73 |
regional part of nervous system | 1.04e-15 | 54 |
central nervous system | 5.17e-15 | 73 |
neural tube | 1.79e-14 | 52 |
neural rod | 1.79e-14 | 52 |
future spinal cord | 1.79e-14 | 52 |
neural keel | 1.79e-14 | 52 |
nervous system | 2.59e-14 | 75 |
ectoderm-derived structure | 2.88e-14 | 95 |
ectoderm | 2.88e-14 | 95 |
presumptive ectoderm | 2.88e-14 | 95 |
pre-chordal neural plate | 3.07e-13 | 49 |
brain | 9.00e-13 | 47 |
future brain | 9.00e-13 | 47 |
regional part of brain | 2.93e-12 | 46 |
anterior neural tube | 2.77e-11 | 40 |
tube | 8.55e-11 | 114 |
regional part of forebrain | 1.12e-10 | 39 |
forebrain | 1.12e-10 | 39 |
future forebrain | 1.12e-10 | 39 |
anatomical conduit | 7.63e-10 | 122 |
gray matter | 5.23e-09 | 34 |
brain grey matter | 1.49e-07 | 29 |
regional part of telencephalon | 1.49e-07 | 29 |
telencephalon | 1.49e-07 | 29 |
occipital lobe | 3.03e-07 | 10 |
visual cortex | 3.03e-07 | 10 |
neocortex | 3.03e-07 | 10 |
embryo | 9.31e-07 | 320 |