FFCP PHASE1:Mm9::chr1:74589435..74589451,+: Difference between revisions
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{{FFCP|EntrezGene=18802|HGNC=|MCL_coexpression_id=20|UniProt=Q8K3R3,D6RGN2|association_with_transcript=-10bp_to_ENSMUST00000067916,ENSMUST00000113749,ENSMUST00000141412_5end|description=CAGE_peak_2_at_Plcd4_5end|id=chr1:74589435..74589451,+|ontology_enrichment_celltype=CL:0000221!7.85e-07!44;CL:0000133!7.85e-07!44|ontology_enrichment_celltype_v019_2=CL:0000128,3.21e-12,6;CL:0000126,3.21e-12,6;CL:0000127,3.21e-12,6;CL:0002610,1.58e-10,3;CL:0002614,2.22e-09,3;CL:0002453,4.22e-09,8;CL:0000333,3.18e-07,10;CL:0000095,3.18e-07,10;CL:0000243,3.18e-07,10;CL:0000123,3.18e-07,10;CL:0000125,3.18e-07,10;CL:0000030,3.18e-07,10;CL:0000339,3.18e-07,10;CL:0002605,9.50e-07,2;CL:0002604,9.50e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!7.32e-20!63;UBERON:0000955!2.06e-19!50;UBERON:0006238!2.06e-19!50;UBERON:0001017!2.78e-19!73;UBERON:0005743!2.78e-19!73;UBERON:0000073!4.97e-19!75;UBERON:0001016!4.97e-19!75;UBERON:0002616!5.43e-19!49;UBERON:0001049!6.48e-19!52;UBERON:0005068!6.48e-19!52;UBERON:0006241!6.48e-19!52;UBERON:0007135!6.48e-19!52;UBERON:0004121!1.01e-16!102;UBERON:0000924!1.01e-16!102;UBERON:0006601!1.01e-16!102;UBERON:0002346!1.77e-14!71;UBERON:0003075!1.77e-14!71;UBERON:0007284!1.77e-14!71;UBERON:0003080!1.38e-11!40;UBERON:0003056!5.66e-11!49;UBERON:0002780!8.12e-11!39;UBERON:0001890!8.12e-11!39;UBERON:0006240!8.12e-11!39;UBERON:0007811!1.25e-10!86;UBERON:0000153!1.59e-09!94;UBERON:0003076!8.83e-09!12;UBERON:0003057!8.83e-09!12;UBERON:0001894!2.17e-07!10;UBERON:0006222!2.17e-07!10;UBERON:0002020!3.96e-07!34;UBERON:0002298!5.83e-07!6;UBERON:0004733!5.96e-07!6;UBERON:0004732!5.96e-07!6;UBERON:0002028!5.96e-07!6;UBERON:0007277!5.96e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.90e-19,54;UBERON:0001017,7.64e-18,73;UBERON:0001016,3.05e-17,75;UBERON:0002616,1.13e-15,46;UBERON:0001049,2.27e-15,52;UBERON:0005068,2.27e-15,52;UBERON:0006241,2.27e-15,52;UBERON:0007135,2.27e-15,52;UBERON:0000955,2.91e-15,47;UBERON:0006238,2.91e-15,47;UBERON:0004733,1.16e-13,6;UBERON:0004732,1.16e-13,6;UBERON:0002028,1.16e-13,6;UBERON:0007277,1.16e-13,6;UBERON:0004121,1.29e-12,95;UBERON:0000924,1.29e-12,95;UBERON:0006601,1.29e-12,95;UBERON:0002950,2.52e-12,4;UBERON:0001891,2.52e-12,4;UBERON:0009616,2.52e-12,4;UBERON:0010286,2.52e-12,4;UBERON:0002346,8.97e-12,64;UBERON:0003075,8.97e-12,64;UBERON:0007284,8.97e-12,64;UBERON:0004684,1.58e-10,3;UBERON:0002275,1.58e-10,3;UBERON:0010371,7.43e-10,73;UBERON:0002038,2.22e-09,3;UBERON:0009663,2.22e-09,3;UBERON:0009661,2.22e-09,3;UBERON:0000125,2.22e-09,3;UBERON:0002308,2.22e-09,3;UBERON:0003076,2.47e-09,12;UBERON:0003057,2.47e-09,12;UBERON:0003080,2.50e-08,40;UBERON:0001896,6.89e-08,2;UBERON:0002298,6.89e-08,2;UBERON:0005290,6.89e-08,2;UBERON:0010096,6.89e-08,2;UBERON:0002037,9.28e-08,4;UBERON:0002680,9.28e-08,4;UBERON:0001895,9.28e-08,4;UBERON:0010092,9.28e-08,4;UBERON:0006215,9.28e-08,4;UBERON:0001894,3.50e-07,10;UBERON:0006222,3.50e-07,10;UBERON:0002780,4.73e-07,39;UBERON:0001890,4.73e-07,39;UBERON:0006240,4.73e-07,39;UBERON:0010314,4.76e-07,92|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0,0.782391344348039,1.96222640742402,1.09843091367236,2.13872888981712,1.67983705950435,1.43752564364972,0,0,0,0,0,0,0,0.528990979272033,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0,0,0,0.662605622854841,0.367472397644862,0.287536413054709,0,3.30347642998166,2.29837208553338,2.91852413186863,0.131886287730194,0,0.52091337055676,1.95428099300967,1.12552522006336,1.83357897332172,0.883885756421003,0.996601765593721,0.186399445825301,0,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,1.29413479957927,0.441683036920787,0.484875253135222,0,2.04946557908083,3.56059401582874,0,0,0,0,2.84602214869163,0.915001205637253,0.251308704225729,0.347648640384553,0.255715457330331,2.0778804455956,2.59586020908412,0.101839363850316,0,0,0,0,0,0,0.60281927134286,0.408218994907967,0.384341160854549,0.468508622798644,0,0,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.126473074248515,0.295220295959204,0.470996183524124,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,4.49541651965817,3.6335622843583,0,3.28212205365685,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.428674070063185,0.709360934569094,1.24858172321449,1.31639216481697,1.2178597964584,0,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,2.41052892613663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,0,0,0.515559547031063,0,0,0.675022500231806,1.35096360967266,0.453142408984205,0,0,0,0.170733605754134,0.486213434136588,0,0.183843508450014,0.222246727801615,0.206035057238894,1.60459604795908,0,0.50695859978048,0.565879024158229,0.561849044819294,0.384150914429216,0.574354689556133,1.42888107384922,0.695305955669133,0.38581844092741,0,0.147198920134397,0.342869252385415,0.532427418478012,0.238436189947321,0.436039249896986,0.282328141245992,0.423073039458382,0.182927972872773,1.05227884575137,0.271608227691724,1.12228454331548,0.237270036248348,0.29551344712669,0.409231043169689,0.309873682371932,0.578719832943424,0.249810577937946,0.467863216890817,0,0.765153328275374,1.54413993383661,0.695603506861264|short_description=p2@Plcd4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18802 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K3R3,D6RGN2 | |||
|association_with_transcript=-10bp_to_ENSMUST00000067916,ENSMUST00000113749,ENSMUST00000141412_5end | |||
|cluster_id=chr1:74589435..74589451,+ | |||
|description=CAGE_peak_2_at_Plcd4_5end | |||
|id=chr1:74589435..74589451,+ | |||
|ontology_enrichment_celltype=CL:0000221!7.85e-07!44;CL:0000133!7.85e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,3.21e-12,6;CL:0000126,3.21e-12,6;CL:0000127,3.21e-12,6;CL:0002610,1.58e-10,3;CL:0002614,2.22e-09,3;CL:0002453,4.22e-09,8;CL:0000333,3.18e-07,10;CL:0000095,3.18e-07,10;CL:0000243,3.18e-07,10;CL:0000123,3.18e-07,10;CL:0000125,3.18e-07,10;CL:0000030,3.18e-07,10;CL:0000339,3.18e-07,10;CL:0002605,9.50e-07,2;CL:0002604,9.50e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!7.32e-20!63;UBERON:0000955!2.06e-19!50;UBERON:0006238!2.06e-19!50;UBERON:0001017!2.78e-19!73;UBERON:0005743!2.78e-19!73;UBERON:0000073!4.97e-19!75;UBERON:0001016!4.97e-19!75;UBERON:0002616!5.43e-19!49;UBERON:0001049!6.48e-19!52;UBERON:0005068!6.48e-19!52;UBERON:0006241!6.48e-19!52;UBERON:0007135!6.48e-19!52;UBERON:0004121!1.01e-16!102;UBERON:0000924!1.01e-16!102;UBERON:0006601!1.01e-16!102;UBERON:0002346!1.77e-14!71;UBERON:0003075!1.77e-14!71;UBERON:0007284!1.77e-14!71;UBERON:0003080!1.38e-11!40;UBERON:0003056!5.66e-11!49;UBERON:0002780!8.12e-11!39;UBERON:0001890!8.12e-11!39;UBERON:0006240!8.12e-11!39;UBERON:0007811!1.25e-10!86;UBERON:0000153!1.59e-09!94;UBERON:0003076!8.83e-09!12;UBERON:0003057!8.83e-09!12;UBERON:0001894!2.17e-07!10;UBERON:0006222!2.17e-07!10;UBERON:0002020!3.96e-07!34;UBERON:0002298!5.83e-07!6;UBERON:0004733!5.96e-07!6;UBERON:0004732!5.96e-07!6;UBERON:0002028!5.96e-07!6;UBERON:0007277!5.96e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.90e-19,54;UBERON:0001017,7.64e-18,73;UBERON:0001016,3.05e-17,75;UBERON:0002616,1.13e-15,46;UBERON:0001049,2.27e-15,52;UBERON:0005068,2.27e-15,52;UBERON:0006241,2.27e-15,52;UBERON:0007135,2.27e-15,52;UBERON:0000955,2.91e-15,47;UBERON:0006238,2.91e-15,47;UBERON:0004733,1.16e-13,6;UBERON:0004732,1.16e-13,6;UBERON:0002028,1.16e-13,6;UBERON:0007277,1.16e-13,6;UBERON:0004121,1.29e-12,95;UBERON:0000924,1.29e-12,95;UBERON:0006601,1.29e-12,95;UBERON:0002950,2.52e-12,4;UBERON:0001891,2.52e-12,4;UBERON:0009616,2.52e-12,4;UBERON:0010286,2.52e-12,4;UBERON:0002346,8.97e-12,64;UBERON:0003075,8.97e-12,64;UBERON:0007284,8.97e-12,64;UBERON:0004684,1.58e-10,3;UBERON:0002275,1.58e-10,3;UBERON:0010371,7.43e-10,73;UBERON:0002038,2.22e-09,3;UBERON:0009663,2.22e-09,3;UBERON:0009661,2.22e-09,3;UBERON:0000125,2.22e-09,3;UBERON:0002308,2.22e-09,3;UBERON:0003076,2.47e-09,12;UBERON:0003057,2.47e-09,12;UBERON:0003080,2.50e-08,40;UBERON:0001896,6.89e-08,2;UBERON:0002298,6.89e-08,2;UBERON:0005290,6.89e-08,2;UBERON:0010096,6.89e-08,2;UBERON:0002037,9.28e-08,4;UBERON:0002680,9.28e-08,4;UBERON:0001895,9.28e-08,4;UBERON:0010092,9.28e-08,4;UBERON:0006215,9.28e-08,4;UBERON:0001894,3.50e-07,10;UBERON:0006222,3.50e-07,10;UBERON:0002780,4.73e-07,39;UBERON:0001890,4.73e-07,39;UBERON:0006240,4.73e-07,39;UBERON:0010314,4.76e-07,92 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0,0.782391344348039,1.96222640742402,1.09843091367236,2.13872888981712,1.67983705950435,1.43752564364972,0,0,0,0,0,0,0,0.528990979272033,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0,0,0,0.662605622854841,0.367472397644862,0.287536413054709,0,3.30347642998166,2.29837208553338,2.91852413186863,0.131886287730194,0,0.52091337055676,1.95428099300967,1.12552522006336,1.83357897332172,0.883885756421003,0.996601765593721,0.186399445825301,0,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,1.29413479957927,0.441683036920787,0.484875253135222,0,2.04946557908083,3.56059401582874,0,0,0,0,2.84602214869163,0.915001205637253,0.251308704225729,0.347648640384553,0.255715457330331,2.0778804455956,2.59586020908412,0.101839363850316,0,0,0,0,0,0,0.60281927134286,0.408218994907967,0.384341160854549,0.468508622798644,0,0,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.126473074248515,0.295220295959204,0.470996183524124,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,4.49541651965817,3.6335622843583,0,3.28212205365685,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.428674070063185,0.709360934569094,1.24858172321449,1.31639216481697,1.2178597964584,0,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,2.41052892613663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,0,0,0.515559547031063,0,0,0.675022500231806,1.35096360967266,0.453142408984205,0,0,0,0.170733605754134,0.486213434136588,0,0.183843508450014,0.222246727801615,0.206035057238894,1.60459604795908,0,0.50695859978048,0.565879024158229,0.561849044819294,0.384150914429216,0.574354689556133,1.42888107384922,0.695305955669133,0.38581844092741,0,0.147198920134397,0.342869252385415,0.532427418478012,0.238436189947321,0.436039249896986,0.282328141245992,0.423073039458382,0.182927972872773,1.05227884575137,0.271608227691724,1.12228454331548,0.237270036248348,0.29551344712669,0.409231043169689,0.309873682371932,0.578719832943424,0.249810577937946,0.467863216890817,0,0.765153328275374,1.54413993383661,0.695603506861264 | |||
|short_description=p2@Plcd4 | |||
}} |
Latest revision as of 14:46, 1 October 2015
Short description: | p2@Plcd4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Plcd4_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | -10bp_to_ENSMUST00000067916, ENSMUST00000113749, ENSMUST00000141412_5end |
EntrezGene: | Plcd4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 3.21e-12 | 6 |
macroglial cell | 3.21e-12 | 6 |
astrocyte | 3.21e-12 | 6 |
raphe nuclei neuron | 1.58e-10 | 3 |
neuron of the substantia nigra | 2.22e-09 | 3 |
oligodendrocyte precursor cell | 4.22e-09 | 8 |
migratory neural crest cell | 3.18e-07 | 10 |
neuron associated cell | 3.18e-07 | 10 |
glial cell (sensu Vertebrata) | 3.18e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 3.18e-07 | 10 |
glial cell | 3.18e-07 | 10 |
glioblast | 3.18e-07 | 10 |
glioblast (sensu Vertebrata) | 3.18e-07 | 10 |
astrocyte of the cerebral cortex | 9.50e-07 | 2 |
astrocyte of the hippocampus | 9.50e-07 | 2 |