Personal tools

FFCP PHASE1:Mm9::chr1:74589455..74589492,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18802
|EntrezGene=18802
|HGNC=
|HGNC=
|MCL_coexpression_id=984
|MCL_coexpression_id=984
|TSSclassifier=NA
|UniProt=Q8K3R3,D6RGN2
|UniProt=Q8K3R3,D6RGN2
|association_with_transcript=0bp_to_ENSMUST00000067916,ENSMUST00000113745,ENSMUST00000113747,ENSMUST00000113749,ENSMUST00000113750,ENSMUST00000141412,NM_001081456,uc007bmg.1_5end
|association_with_transcript=0bp_to_ENSMUST00000067916,ENSMUST00000113745,ENSMUST00000113747,ENSMUST00000113749,ENSMUST00000113750,ENSMUST00000141412,NM_001081456,uc007bmg.1_5end
|cluster_id=chr1:74589455..74589492,+
|description=CAGE_peak_1_at_Plcd4_5end
|description=CAGE_peak_1_at_Plcd4_5end
|id=chr1:74589455..74589492,+
|id=chr1:74589455..74589492,+
|ontology_enrichment_celltype=CL:0000221!5.40e-10!44;CL:0000133!5.40e-10!44;CL:0002319!1.99e-09!43;CL:0000055!8.20e-09!50
|ontology_enrichment_celltype=CL:0000221!5.40e-10!44;CL:0000133!5.40e-10!44;CL:0002319!1.99e-09!43;CL:0000055!8.20e-09!50
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.06e-25!73;UBERON:0005743!3.06e-25!73;UBERON:0000073!4.45e-25!75;UBERON:0001016!4.45e-25!75;UBERON:0004121!5.91e-24!102;UBERON:0000924!5.91e-24!102;UBERON:0006601!5.91e-24!102;UBERON:0001049!2.27e-20!52;UBERON:0005068!2.27e-20!52;UBERON:0006241!2.27e-20!52;UBERON:0007135!2.27e-20!52;UBERON:0000033!3.58e-20!63;UBERON:0000955!1.05e-19!50;UBERON:0006238!1.05e-19!50;UBERON:0002616!4.07e-19!49;UBERON:0002346!2.59e-17!71;UBERON:0003075!2.59e-17!71;UBERON:0007284!2.59e-17!71;UBERON:0003080!1.71e-13!40;UBERON:0003056!4.35e-13!49;UBERON:0002780!7.63e-13!39;UBERON:0001890!7.63e-13!39;UBERON:0006240!7.63e-13!39;UBERON:0002020!1.26e-11!34;UBERON:0007811!6.16e-11!86;UBERON:0000153!1.84e-09!94;UBERON:0002791!2.32e-09!29;UBERON:0003528!2.32e-09!29;UBERON:0001893!2.32e-09!29;UBERON:0003076!6.74e-08!12;UBERON:0003057!6.74e-08!12;UBERON:0002619!5.53e-07!17
|ontology_enrichment_uberon=UBERON:0001017!3.06e-25!73;UBERON:0005743!3.06e-25!73;UBERON:0000073!4.45e-25!75;UBERON:0001016!4.45e-25!75;UBERON:0004121!5.91e-24!102;UBERON:0000924!5.91e-24!102;UBERON:0006601!5.91e-24!102;UBERON:0001049!2.27e-20!52;UBERON:0005068!2.27e-20!52;UBERON:0006241!2.27e-20!52;UBERON:0007135!2.27e-20!52;UBERON:0000033!3.58e-20!63;UBERON:0000955!1.05e-19!50;UBERON:0006238!1.05e-19!50;UBERON:0002616!4.07e-19!49;UBERON:0002346!2.59e-17!71;UBERON:0003075!2.59e-17!71;UBERON:0007284!2.59e-17!71;UBERON:0003080!1.71e-13!40;UBERON:0003056!4.35e-13!49;UBERON:0002780!7.63e-13!39;UBERON:0001890!7.63e-13!39;UBERON:0006240!7.63e-13!39;UBERON:0002020!1.26e-11!34;UBERON:0007811!6.16e-11!86;UBERON:0000153!1.84e-09!94;UBERON:0002791!2.32e-09!29;UBERON:0003528!2.32e-09!29;UBERON:0001893!2.32e-09!29;UBERON:0003076!6.74e-08!12;UBERON:0003057!6.74e-08!12;UBERON:0002619!5.53e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.00e-23,73;UBERON:0000073,3.50e-23,54;UBERON:0001016,1.46e-22,75;UBERON:0004121,7.74e-22,95;UBERON:0000924,7.74e-22,95;UBERON:0006601,7.74e-22,95;UBERON:0001049,1.67e-21,52;UBERON:0005068,1.67e-21,52;UBERON:0006241,1.67e-21,52;UBERON:0007135,1.67e-21,52;UBERON:0010371,5.08e-19,73;UBERON:0002346,1.26e-18,64;UBERON:0003075,1.26e-18,64;UBERON:0007284,1.26e-18,64;UBERON:0000955,4.54e-18,47;UBERON:0006238,4.54e-18,47;UBERON:0002616,2.37e-17,46;UBERON:0003080,1.03e-13,40;UBERON:0002780,6.51e-13,39;UBERON:0001890,6.51e-13,39;UBERON:0006240,6.51e-13,39;UBERON:0003056,7.07e-13,49;UBERON:0002020,3.23e-12,34;UBERON:0010314,1.29e-10,92;UBERON:0003528,2.31e-09,29;UBERON:0002791,2.31e-09,29;UBERON:0001893,2.31e-09,29;UBERON:0003076,6.01e-09,12;UBERON:0003057,6.01e-09,12;UBERON:0002619,1.11e-07,17;UBERON:0002021,2.98e-07,10;UBERON:0000411,2.98e-07,10;UBERON:0001950,2.98e-07,10
|phase1_expression=6.08565618998217,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.78407908307194,4.25783111121961,0.550640256485045,0.782391344348039,16.3518867285335,12.9614847813338,22.1650084944683,7.69925318939494,5.75010257459886,0,0,0,0,0,0.515672092277442,0.606949382578793,1.05798195854407,1.26766280701236,1.0165335962074,0.889294796111139,0,0,0,5.69240209984969,14.6002956022191,0.311068836925433,0.270011876663381,0,3.99911378165325,6.62605622854841,0.61245399607477,0.287536413054709,0,8.8092704799511,9.70423769447427,8.75557239560588,1.18697658957174,0.731901148819277,2.08365348222704,6.42120897703176,7.87867654044352,7.33431589328689,6.48182888042069,6.83384067835694,2.42319279572891,0.075726193333184,0.755715601067855,0,0,0,0,0,0,11.3759980306719,0,0,0,10.4224130634744,0,0,0,0.216491041011214,0,1.01104889002957,2.39786147410026,0,0.593768556259299,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0.502666365318702,0.247194967734374,0,3.5384422077995,7.44127509758082,12.8088080707028,11.1521308221101,0,7.61230072230023,11.51956887474,0,0,0,0,10.9347166765521,8.6925114535539,2.26177833803156,5.04090528557602,4.85859368927628,11.4283424507758,6.65189178577806,0.101839363850316,2.61254638281195,0.252722758433675,1.05220927943237,0,0,0.360124259610698,0.452114453507145,1.7009124787832,1.40925092313335,1.96773621575431,1.55222022443409,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0,7.14985825118033,3.19004298375782,0,0,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0,0.198956472041151,0,0,0.432276099749388,0,0.189667900953082,0.114248512609729,1.1270773567308,0,0.193952487167626,0.420814919341911,0.252946148497029,0.885660887877613,1.56998727841375,1.23397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.739012760666419,0,0,0,0,0,0,0.390267295715598,0,0.44292937929755,0.159454768657487,0,0.345369963731791,0.144649058581512,0,0,1.47529281905711,0,19.1055202085472,17.2301179290539,0.163934945376675,56.5534876937796,0,0.390438744296638,0.215423397732799,0.477937595905104,0.668396022247182,0.283076530788832,0,0.584511715822624,1.18586333383957,6.42642632843614,0,0.35613120733451,0,0.659880491890142,0,0,0,0.188605079755898,0,0,0.258428293168221,0,1.06949213515416,0,0,0,3.40439605753788,0.36012218806262,0.129358683782755,1.28602221018955,5.32020700926821,4.28085162244969,7.56925494769756,7.61162372786498,0,0,0.441056796109924,3.13283880588812,0.807322133479528,1.02531972377865,0.477489376012546,0,0,17.8008289930089,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0.90730481304255,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0,0,3.16833006883652,0,0.202725215290164,0.513554785824136,0.129920822977795,0.179026695667481,0,0,0.147689527174577,0.201932899896295,0,0,0.0974578807397524,0,0.116876902181569,6.34845074122592,0.221985953374065,0,0,0.386379188064381,0,0.549454872801795,0.214368379079066,0,6.21227026878773,4.14292712856459,4.01026859407578,3.95262319390481,3.42541259885321,7.55393897389701,4.72515750162264,3.60256962579376,5.89085131679466,4.65984280576638,0.103787347584177,1.19707462020309,0.170733605754134,0,1.04806581313991,0.735374033800057,2.66696073361938,2.26638562962784,2.88827288632634,4.04315538822076,2.5347929989024,3.9611531691076,3.65201879132541,3.64943368707755,3.67587001315925,4.28664322154766,3.1288768005111,2.50781986602817,3.70877310722976,2.94397840268795,2.05721551431249,1.77475806159337,4.29185141905178,3.63366041580821,2.82328141245992,2.62305284464197,1.82927972872773,7.10288220882176,3.25929873230068,6.17256498823512,3.08451047122853,2.46261205938909,4.09231043169689,3.56354734727722,0.771626443924566,3.2475375131933,3.74290573512653,2.36358159453128,2.86932498103265,8.38247392654159,9.50658126043728
|phase1_expression=6.08565618998217,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.78407908307194,4.25783111121961,0.550640256485045,0.782391344348039,16.3518867285335,12.9614847813338,22.1650084944683,7.69925318939494,5.75010257459886,0,0,0,0,0,0.515672092277442,0.606949382578793,1.05798195854407,1.26766280701236,1.0165335962074,0.889294796111139,0,0,0,5.69240209984969,14.6002956022191,0.311068836925433,0.270011876663381,0,3.99911378165325,6.62605622854841,0.61245399607477,0.287536413054709,0,8.8092704799511,9.70423769447427,8.75557239560588,1.18697658957174,0.731901148819277,2.08365348222704,6.42120897703176,7.87867654044352,7.33431589328689,6.48182888042069,6.83384067835694,2.42319279572891,0.075726193333184,0.755715601067855,0,0,0,0,0,0,11.3759980306719,0,0,0,10.4224130634744,0,0,0,0.216491041011214,0,1.01104889002957,2.39786147410026,0,0.593768556259299,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0.502666365318702,0.247194967734374,0,3.5384422077995,7.44127509758082,12.8088080707028,11.1521308221101,0,7.61230072230023,11.51956887474,0,0,0,0,10.9347166765521,8.6925114535539,2.26177833803156,5.04090528557602,4.85859368927628,11.4283424507758,6.65189178577806,0.101839363850316,2.61254638281195,0.252722758433675,1.05220927943237,0,0,0.360124259610698,0.452114453507145,1.7009124787832,1.40925092313335,1.96773621575431,1.55222022443409,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0,7.14985825118033,3.19004298375782,0,0,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0,0.198956472041151,0,0,0.432276099749388,0,0.189667900953082,0.114248512609729,1.1270773567308,0,0.193952487167626,0.420814919341911,0.252946148497029,0.885660887877613,1.56998727841375,1.23397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.739012760666419,0,0,0,0,0,0,0.390267295715598,0,0.44292937929755,0.159454768657487,0,0.345369963731791,0.144649058581512,0,0,1.47529281905711,0,19.1055202085472,17.2301179290539,0.163934945376675,56.5534876937796,0,0.390438744296638,0.215423397732799,0.477937595905104,0.668396022247182,0.283076530788832,0,0.584511715822624,1.18586333383957,6.42642632843614,0,0.35613120733451,0,0.659880491890142,0,0,0,0.188605079755898,0,0,0.258428293168221,0,1.06949213515416,0,0,0,3.40439605753788,0.36012218806262,0.129358683782755,1.28602221018955,5.32020700926821,4.28085162244969,7.56925494769756,7.61162372786498,0,0,0.441056796109924,3.13283880588812,0.807322133479528,1.02531972377865,0.477489376012546,0,0,17.8008289930089,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0.90730481304255,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0,0,3.16833006883652,0,0.202725215290164,0.513554785824136,0.129920822977795,0.179026695667481,0,0,0.147689527174577,0.201932899896295,0,0,0.0974578807397524,0,0.116876902181569,6.34845074122592,0.221985953374065,0,0,0.386379188064381,0,0.549454872801795,0.214368379079066,0,6.21227026878773,4.14292712856459,4.01026859407578,3.95262319390481,3.42541259885321,7.55393897389701,4.72515750162264,3.60256962579376,5.89085131679466,4.65984280576638,0.103787347584177,1.19707462020309,0.170733605754134,0,1.04806581313991,0.735374033800057,2.66696073361938,2.26638562962784,2.88827288632634,4.04315538822076,2.5347929989024,3.9611531691076,3.65201879132541,3.64943368707755,3.67587001315925,4.28664322154766,3.1288768005111,2.50781986602817,3.70877310722976,2.94397840268795,2.05721551431249,1.77475806159337,4.29185141905178,3.63366041580821,2.82328141245992,2.62305284464197,1.82927972872773,7.10288220882176,3.25929873230068,6.17256498823512,3.08451047122853,2.46261205938909,4.09231043169689,3.56354734727722,0.771626443924566,3.2475375131933,3.74290573512653,2.36358159453128,2.86932498103265,8.38247392654159,9.50658126043728
|short_description=p1@Plcd4
|short_description=p1@Plcd4
}}
}}

Latest revision as of 14:47, 1 October 2015

Short description:p1@Plcd4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Plcd4_5end
Coexpression cluster:MCL_coexpression_mm9:984
Association with transcript: 0bp_to_ENSMUST00000067916, ENSMUST00000113745, ENSMUST00000113747, ENSMUST00000113749, ENSMUST00000113750, ENSMUST00000141412, NM_001081456, uc007bmg.1_5end
EntrezGene:Plcd4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Plcd4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.78
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.26
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C216.35
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B812.96
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C322.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C85.69
Mouse Microglia, donor2.CNhs12634.11736-123E814.60
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.63
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.33
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.48
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.40
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F57.44
bone (os femoris), neonate N16.CNhs11225.1525-43A612.81
bone (os femoris), neonate N20.CNhs11195.1350-25C311.15
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.61
cerebellum, neonate N30.CNhs11135.1395-42I211.52
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.93
corpus striatum, adult.CNhs10487.19-21D88.69
corpus striatum, neonate N00.CNhs11226.630-43F12.26
cortex, adult.CNhs10473.12-14D55.04
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F211.43
diencephalon, neonate N30.CNhs11201.1388-42B26.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.61
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G81.97
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E87.15
hippocampus, neonate N00.CNhs11228.627-43G13.19
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H11.23
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C219.11
medulla oblongata, neonate N30.CNhs11200.1396-42A317.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C256.55
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I96.43
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B95.32
pituitary gland, embryo E16.CNhs11036.449-43F64.28
pituitary gland, embryo E17.CNhs11039.1265-44F57.57
pituitary gland, neonate N00.CNhs11190.1308-22E97.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C33.13
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H31.03
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C917.80
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B46.35
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.95
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.65
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.65
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.13
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.63
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.26
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.56
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B33.74
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D18.38
whole body, neonate N10.CNhs10518.761-6B49.51





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.00e-2373
regional part of nervous system3.50e-2354
nervous system1.46e-2275
ectoderm-derived structure7.74e-2295
ectoderm7.74e-2295
presumptive ectoderm7.74e-2295
neural tube1.67e-2152
neural rod1.67e-2152
future spinal cord1.67e-2152
neural keel1.67e-2152
ecto-epithelium5.08e-1973
neurectoderm1.26e-1864
neural plate1.26e-1864
presumptive neural plate1.26e-1864
brain4.54e-1847
future brain4.54e-1847
regional part of brain2.37e-1746
anterior neural tube1.03e-1340
regional part of forebrain6.51e-1339
forebrain6.51e-1339
future forebrain6.51e-1339
pre-chordal neural plate7.07e-1349
gray matter3.23e-1234
structure with developmental contribution from neural crest1.29e-1092
brain grey matter2.31e-0929
regional part of telencephalon2.31e-0929
telencephalon2.31e-0929
posterior neural tube6.01e-0912
chordal neural plate6.01e-0912
regional part of cerebral cortex1.11e-0717
occipital lobe2.98e-0710
visual cortex2.98e-0710
neocortex2.98e-0710
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:74589455..74589492,%2B&oldid=4308035"