FFCP PHASE1:Mm9::chr11:51912304..51912315,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19052 | |EntrezGene=19052 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=P63330 | |UniProt=P63330 | ||
|association_with_transcript=-10bp_to_NM_019411,uc007ivb.1_5end | |association_with_transcript=-10bp_to_NM_019411,uc007ivb.1_5end | ||
|cluster_id=chr11:51912304..51912315,+ | |||
|description=CAGE_peak_3_at_Ppp2ca_5end | |description=CAGE_peak_3_at_Ppp2ca_5end | ||
|id=chr11:51912304..51912315,+ | |id=chr11:51912304..51912315,+ | ||
|ontology_enrichment_celltype=CL:0002319!1.15e-16!43;CL:0000055!1.91e-16!50;CL:0000221!7.98e-16!44;CL:0000133!7.98e-16!44;CL:0000540!1.31e-15!33;CL:0000047!1.31e-15!33;CL:0000031!1.31e-15!33;CL:0000404!1.31e-15!33;CL:0000393!5.85e-15!39;CL:0000211!5.85e-15!39;CL:0000117!3.61e-14!23;CL:0000337!3.61e-14!23;CL:0002321!6.43e-14!70;CL:0000220!6.43e-14!70;CL:0002371!1.49e-12!118;CL:0000144!1.65e-12!121;CL:0000012!1.65e-12!121;CL:0000548!1.37e-11!115;CL:0000004!1.37e-11!115;CL:0000255!1.37e-11!115;CL:0000034!6.66e-08!97;CL:0000723!4.63e-07!91;CL:0000048!4.63e-07!91 | |ontology_enrichment_celltype=CL:0002319!1.15e-16!43;CL:0000055!1.91e-16!50;CL:0000221!7.98e-16!44;CL:0000133!7.98e-16!44;CL:0000540!1.31e-15!33;CL:0000047!1.31e-15!33;CL:0000031!1.31e-15!33;CL:0000404!1.31e-15!33;CL:0000393!5.85e-15!39;CL:0000211!5.85e-15!39;CL:0000117!3.61e-14!23;CL:0000337!3.61e-14!23;CL:0002321!6.43e-14!70;CL:0000220!6.43e-14!70;CL:0002371!1.49e-12!118;CL:0000144!1.65e-12!121;CL:0000012!1.65e-12!121;CL:0000548!1.37e-11!115;CL:0000004!1.37e-11!115;CL:0000255!1.37e-11!115;CL:0000034!6.66e-08!97;CL:0000723!4.63e-07!91;CL:0000048!4.63e-07!91 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.15e-16,43;CL:0000221,7.98e-16,44;CL:0000133,7.98e-16,44;CL:0000540,1.31e-15,33;CL:0000047,1.31e-15,33;CL:0000031,1.31e-15,33;CL:0000404,1.31e-15,33;CL:0000393,5.85e-15,39;CL:0000211,5.85e-15,39;CL:0000117,3.61e-14,23;CL:0000337,3.61e-14,23;CL:0002321,6.43e-14,70;CL:0000034,6.66e-08,97;CL:0000723,4.63e-07,91;CL:0000048,4.63e-07,91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.07e-23!75;UBERON:0001016!1.07e-23!75;UBERON:0001017!1.53e-22!73;UBERON:0005743!1.53e-22!73;UBERON:0004121!1.50e-16!102;UBERON:0000924!1.50e-16!102;UBERON:0006601!1.50e-16!102;UBERON:0001049!2.34e-16!52;UBERON:0005068!2.34e-16!52;UBERON:0006241!2.34e-16!52;UBERON:0007135!2.34e-16!52;UBERON:0002020!3.04e-16!34;UBERON:0002346!6.12e-15!71;UBERON:0003075!6.12e-15!71;UBERON:0007284!6.12e-15!71;UBERON:0000955!1.17e-14!50;UBERON:0006238!1.17e-14!50;UBERON:0002616!3.04e-14!49;UBERON:0002791!6.41e-13!29;UBERON:0003528!6.41e-13!29;UBERON:0001893!6.41e-13!29;UBERON:0003080!8.80e-12!40;UBERON:0000033!2.05e-11!63;UBERON:0002780!2.63e-11!39;UBERON:0001890!2.63e-11!39;UBERON:0006240!2.63e-11!39;UBERON:0003056!3.43e-10!49;UBERON:0000956!1.67e-08!21;UBERON:0001869!1.67e-08!21;UBERON:0000203!1.67e-08!21;UBERON:0007811!5.45e-08!86;UBERON:0002619!3.04e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.07e-23,75;UBERON:0001017,1.53e-22,73;UBERON:0000073,1.90e-17,54;UBERON:0004121,7.36e-17,95;UBERON:0000924,7.36e-17,95;UBERON:0006601,7.36e-17,95;UBERON:0001049,2.34e-16,52;UBERON:0005068,2.34e-16,52;UBERON:0006241,2.34e-16,52;UBERON:0007135,2.34e-16,52;UBERON:0002020,3.04e-16,34;UBERON:0002346,1.29e-15,64;UBERON:0003075,1.29e-15,64;UBERON:0007284,1.29e-15,64;UBERON:0000955,2.96e-13,47;UBERON:0006238,2.96e-13,47;UBERON:0003528,6.41e-13,29;UBERON:0002791,6.41e-13,29;UBERON:0001893,6.41e-13,29;UBERON:0002616,7.54e-13,46;UBERON:0003080,8.80e-12,40;UBERON:0010371,2.40e-11,73;UBERON:0002780,2.63e-11,39;UBERON:0001890,2.63e-11,39;UBERON:0006240,2.63e-11,39;UBERON:0010314,1.19e-10,92;UBERON:0003056,3.43e-10,49;UBERON:0000956,1.67e-08,21;UBERON:0001869,1.67e-08,21;UBERON:0000203,1.67e-08,21;UBERON:0002619,3.04e-07,17 | |||
|phase1_expression=11.8510146857548,24.4282785347553,22.7499619694768,20.2651021575576,22.5403078475856,15.4448930158939,14.2503710763271,15.236552166106,17.5985902689583,15.2141942109296,11.6428218393343,12.4444568032725,10.9568467155972,13.6375827773636,15.9892685671518,15.1856450542369,23.0855419782288,14.8267217718372,12.2031845909108,14.004858509335,8.75945888556019,13.1064055585169,11.4927907221132,16.1592347021341,16.2880589557691,21.8208146363708,17.6612418425221,19.6078821744159,17.29213117053,13.6096270070363,14.6342137032501,8.89042942843484,8.61090702618398,0,11.554064790051,15.9585259544153,14.7001936508906,16.3227335987394,15.626706890476,25.1291397107423,22.3527965451785,16.3930916390027,19.4204141212461,17.2478640626541,18.1464706882931,14.3166466686112,12.5182615095686,15.2617609466313,20.4308149943059,22.3594383935426,17.6382891247957,15.8127820801469,18.456086666351,21.7608642603403,15.4603147605533,12.6057123657614,10.601737277734,18.5641953219879,25.6941905291689,38.6163414868584,26.6209189472595,14.2314703469035,6.22506357277798,13.498495759221,4.94433181283487,13.4991221839759,17.0772062995491,6.91592949578798,16.071889907814,20.6559085647487,21.6634710191923,25.9942395807461,30.4798586513227,22.2933254571216,23.6738313415044,21.1420320920305,18.7196997698961,19.1531007127782,24.1162257212302,32.9715719325485,33.0270393404699,31.2548022334056,22.8930059181132,18.0084035210138,23.9893249009592,28.8736013764194,28.4743361598206,28.3327157654457,22.9450365799548,19.8753203080846,13.9134954576805,15.487629785665,13.599426674155,9.17495425784289,7.79731700937203,8.51251085484938,11.5164424508037,10.9075406449957,7.01422212427746,12.3668851078619,11.4083170019111,11.5493829672886,17.8363667794652,21.3320010945999,10.1750789275271,12.92135313923,14.6602089054287,11.8751234907822,13.2058320660058,10.8362761517322,14.2257967948231,15.5277393939192,15.2206228188999,13.2635923686308,13.1699351991989,14.2003248202533,12.3597483867187,9.68815691363408,12.3845477272982,11.8089800461609,12.367125033782,12.6067565815158,5.59175283654366,15.517382241612,15.4990563041957,14.3055950916811,14.0183695671927,13.7977628128484,13.9777249780371,21.2702707954848,18.3000241127451,24.8795617183472,15.8180131374972,20.7129520437568,20.9865925005156,21.7403292510795,12.3225630258883,9.82815067819735,9.85618757891331,12.8369532090749,15.7445735984871,13.5642241615749,12.9644733459851,13.7141384230501,14.4917743192328,12.4270308676304,15.2733811032358,9.8307280880826,15.089759505299,13.0483195315795,11.2608719464927,9.86380795924087,10.8438427197983,10.447564995665,10.7006710932131,12.7381930763836,11.937624184325,13.8967869841946,11.9348669746149,12.4275463521301,11.9608290590359,13.1445304866541,10.6535131013345,13.9702604540657,13.2669717083145,16.0448421877781,12.0723030629829,14.1286064264275,12.8356682932515,9.68588038066662,11.5117709555115,14.1813987802572,14.9294078397914,12.3469905259542,16.6129059365661,19.1402579025469,19.4947081960441,13.2225283331772,10.024547775156,15.0953836709285,11.9846739029547,12.1010114774006,11.3412802360884,13.5060194539917,12.8122846617018,15.811099653505,15.0801125280162,12.3353012665514,14.622306533934,7.19055526923377,7.99710784536369,12.5459002150251,14.4147604724342,15.1950521770939,16.9061603509621,14.8665469327079,13.7706265889014,12.1334968410251,11.1296305338693,11.8088118383682,12.8738956829927,14.4374681788507,9.19003143970162,13.3476084572875,14.3488066432638,11.4679677316275,11.9687471619217,12.5412123071257,9.93040821947537,13.8094145976389,8.43103179230184,5.49122826376163,7.18841032636773,8.55924179637558,7.48890415474945,11.1134706296729,11.1226396383586,11.5786445127208,11.6394509804961,13.6433816474749,14.0149879740142,13.9190970335654,11.9692026627136,10.0503754465089,11.9021820443007,15.0252908850505,12.9260818167077,11.0732344824387,14.3509291791738,15.8947415274266,12.9513736399422,11.4272756279394,19.6028669121054,16.3171705145613,13.277635371514,9.3818493743609,22.6376331882787,21.2153152731888,11.9672510124973,10.856249869788,21.7700671397217,14.4462335389756,19.8189525914175,18.8785350382516,15.81870585985,17.8338214396964,18.6212922770451,15.7818163272108,16.602086673754,18.9579576688866,9.22610553853746,12.4645922567079,10.2618784392753,11.8778488540226,18.5843193675948,9.71122544619926,10.883648050731,7.92141334974772,9.44966057218473,9.83792473420568,9.8202751403924,7.63420831902762,10.3384239731569,10.1131762539461,10.5418608574999,14.4389760547462,11.234506989875,16.7456817449118,16.1698354728443,13.5032332069903,10.995094485821,12.3074484145429,15.7967059778036,11.5696680663548,11.9682571112492,10.591603543191,14.1138174755176,7.91454014119104,9.36493674836252,13.148217634338,12.2953514323231,12.4747083806247,13.699599321603,18.17167959703,11.9609616558497,14.2406938894624,13.519200497989,11.1137389632768,12.4391747226133,13.0403558727718,14.10820968949,13.0154850661002,13.681797406638,11.4560474161814,11.8625997592926,11.3858901591035,12.528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| ||
|short_description=p3@Ppp2ca | |short_description=p3@Ppp2ca | ||
}} | }} |
Latest revision as of 15:44, 1 October 2015
Short description: | p3@Ppp2ca |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ppp2ca_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_NM_019411, uc007ivb.1_5end |
EntrezGene: | Ppp2ca |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.15e-16 | 43 |
ectodermal cell | 7.98e-16 | 44 |
neurectodermal cell | 7.98e-16 | 44 |
neuron | 1.31e-15 | 33 |
neuronal stem cell | 1.31e-15 | 33 |
neuroblast | 1.31e-15 | 33 |
electrically signaling cell | 1.31e-15 | 33 |
electrically responsive cell | 5.85e-15 | 39 |
electrically active cell | 5.85e-15 | 39 |
CNS neuron (sensu Vertebrata) | 3.61e-14 | 23 |
neuroblast (sensu Vertebrata) | 3.61e-14 | 23 |
embryonic cell | 6.43e-14 | 70 |
stem cell | 6.66e-08 | 97 |
somatic stem cell | 4.63e-07 | 91 |
multi fate stem cell | 4.63e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.07e-23 | 75 |
central nervous system | 1.53e-22 | 73 |
regional part of nervous system | 1.90e-17 | 54 |
ectoderm-derived structure | 7.36e-17 | 95 |
ectoderm | 7.36e-17 | 95 |
presumptive ectoderm | 7.36e-17 | 95 |
neural tube | 2.34e-16 | 52 |
neural rod | 2.34e-16 | 52 |
future spinal cord | 2.34e-16 | 52 |
neural keel | 2.34e-16 | 52 |
gray matter | 3.04e-16 | 34 |
neurectoderm | 1.29e-15 | 64 |
neural plate | 1.29e-15 | 64 |
presumptive neural plate | 1.29e-15 | 64 |
brain | 2.96e-13 | 47 |
future brain | 2.96e-13 | 47 |
brain grey matter | 6.41e-13 | 29 |
regional part of telencephalon | 6.41e-13 | 29 |
telencephalon | 6.41e-13 | 29 |
regional part of brain | 7.54e-13 | 46 |
anterior neural tube | 8.80e-12 | 40 |
ecto-epithelium | 2.40e-11 | 73 |
regional part of forebrain | 2.63e-11 | 39 |
forebrain | 2.63e-11 | 39 |
future forebrain | 2.63e-11 | 39 |
structure with developmental contribution from neural crest | 1.19e-10 | 92 |
pre-chordal neural plate | 3.43e-10 | 49 |
cerebral cortex | 1.67e-08 | 21 |
cerebral hemisphere | 1.67e-08 | 21 |
pallium | 1.67e-08 | 21 |
regional part of cerebral cortex | 3.04e-07 | 17 |