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FFCP PHASE1:Mm9::chrX:140098876..140098897,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18481
|EntrezGene=18481
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=A3KGC2
|UniProt=A3KGC2
|association_with_transcript=-18bp_to_ENSMUST00000126592_5end
|association_with_transcript=-18bp_to_ENSMUST00000126592_5end
|cluster_id=chrX:140098876..140098897,+
|description=CAGE_peak_5_at_Pak3_5end
|description=CAGE_peak_5_at_Pak3_5end
|id=chrX:140098876..140098897,+
|id=chrX:140098876..140098897,+
|ontology_enrichment_celltype=CL:0000117!3.75e-11!23;CL:0000337!3.75e-11!23;CL:0000393!6.28e-11!39;CL:0000211!6.28e-11!39;CL:0000540!1.55e-09!33;CL:0000047!1.55e-09!33;CL:0000031!1.55e-09!33;CL:0000404!1.55e-09!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.33e-12,23;CL:0000337,2.33e-12,23;CL:0000393,6.15e-10,39;CL:0000211,6.15e-10,39;CL:0000540,4.80e-09,33;CL:0000047,4.80e-09,33;CL:0000031,4.80e-09,33;CL:0000404,4.80e-09,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!6.24e-21!71;UBERON:0003075!6.24e-21!71;UBERON:0007284!6.24e-21!71;UBERON:0004121!7.46e-20!102;UBERON:0000924!7.46e-20!102;UBERON:0006601!7.46e-20!102;UBERON:0001017!2.40e-19!73;UBERON:0005743!2.40e-19!73;UBERON:0001049!4.04e-19!52;UBERON:0005068!4.04e-19!52;UBERON:0006241!4.04e-19!52;UBERON:0007135!4.04e-19!52;UBERON:0000073!7.25e-19!75;UBERON:0001016!7.25e-19!75;UBERON:0000955!5.19e-18!50;UBERON:0006238!5.19e-18!50;UBERON:0000033!1.41e-17!63;UBERON:0002616!1.86e-17!49;UBERON:0003056!6.14e-16!49;UBERON:0002020!1.52e-15!34;UBERON:0003080!1.60e-14!40;UBERON:0002780!7.52e-14!39;UBERON:0001890!7.52e-14!39;UBERON:0006240!7.52e-14!39;UBERON:0002791!1.50e-12!29;UBERON:0003528!1.50e-12!29;UBERON:0001893!1.50e-12!29;UBERON:0000153!3.20e-09!94;UBERON:0007811!1.70e-08!86;UBERON:0000956!2.53e-08!21;UBERON:0001869!2.53e-08!21;UBERON:0000203!2.53e-08!21;UBERON:0002021!5.47e-08!10;UBERON:0000411!5.47e-08!10;UBERON:0001950!5.47e-08!10;UBERON:0000468!7.41e-08!333;UBERON:0002619!9.79e-08!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.75e-22,54;UBERON:0002346,1.01e-21,64;UBERON:0003075,1.01e-21,64;UBERON:0007284,1.01e-21,64;UBERON:0001017,1.60e-20,73;UBERON:0001049,2.08e-20,52;UBERON:0005068,2.08e-20,52;UBERON:0006241,2.08e-20,52;UBERON:0007135,2.08e-20,52;UBERON:0001016,1.87e-19,75;UBERON:0002020,2.75e-18,34;UBERON:0010371,1.66e-17,73;UBERON:0004121,1.96e-17,95;UBERON:0000924,1.96e-17,95;UBERON:0006601,1.96e-17,95;UBERON:0000955,2.07e-16,47;UBERON:0006238,2.07e-16,47;UBERON:0003056,4.32e-16,49;UBERON:0002616,1.02e-15,46;UBERON:0010314,7.31e-15,92;UBERON:0003080,2.74e-14,40;UBERON:0003528,2.95e-14,29;UBERON:0002791,2.95e-14,29;UBERON:0001893,2.95e-14,29;UBERON:0002780,1.90e-13,39;UBERON:0001890,1.90e-13,39;UBERON:0006240,1.90e-13,39;UBERON:0002021,1.62e-10,10;UBERON:0000411,1.62e-10,10;UBERON:0001950,1.62e-10,10;UBERON:0002619,3.77e-09,17;UBERON:0000956,1.21e-08,21;UBERON:0001869,1.21e-08,21;UBERON:0000203,1.21e-08,21;UBERON:0002420,2.66e-07,8;UBERON:0007245,2.66e-07,8;UBERON:0010009,2.66e-07,8;UBERON:0010011,2.66e-07,8;UBERON:0000454,2.66e-07,8;UBERON:0003076,5.74e-07,12;UBERON:0003057,5.74e-07,12
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27331726736501,4.05507724878058,4.03802854755699,0,0.436050312760893,0,0.58328969722285,0,0,0,0,0,0.771778308107841,0.573066879877513,1.03134418455488,4.65327859977075,7.93486468908049,1.90149421051854,0.338844532069132,0,0,0,0,0.299600110518405,0,1.24427534770173,0.945041568321835,0.630974884054146,3.71346279724945,4.8591079009355,1.71487118900936,1.24599112323707,0.919218786610021,8.8092704799511,10.4703617229854,13.8245879930619,4.3522474950964,3.93396867490361,6.77187381723788,6.14202597803038,7.31591393041184,13.4462458043593,10.9012576625257,12.9558229527184,5.40558392893372,0.075726193333184,0.68014404096107,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0,0.845060518660083,0,0,0,0.649473123033642,0.506719730950197,0.505524445014783,0.45673551887624,0,3.71105347662062,1.04091196059682,0.304465478312141,0.461230994512117,1.50722640552623,1.29347577849275,1.25666591329675,0,0.144599356919912,0,1.13236794963186,0.220841518460394,0,0,2.34224637609238,2.51336048176146,0,0,0,0,12.2828324311955,4.11750542536764,2.01046963380583,10.7771078519211,8.69432554923124,8.51930982694196,8.11206315338788,0.81471491080253,0.248813941220186,0,1.05220927943237,0.390361328888111,1.14951052216736,1.26043490863744,1.9591626318643,1.2246569847239,1.40925092313335,1.78033276663485,1.29351685369508,0.431135985865684,1.32374256117473,0.879755620819744,1.31517439456545,1.39023624612799,2.089512999133,1.02891068203972,0.398068533636986,0,0,0,0.414251545071004,1.40715635988658,0.540186184383045,0.710234206755631,0.983821158737019,0.771335564436891,0.465067889500816,1.3413670069981,0.700592054203017,0.658239399653922,0,0.405344047729279,0.146199987425332,0,0.134206418760372,8.41159794256509,2.57261530948211,0,0,0,0.232236671860439,0.644337306610467,0.201683524623343,0.22237804384487,0.570676878337677,0,0.164698954724011,0.251335208800269,0.397912944082302,0.58489226135736,0,0,0.199141273254367,0.189667900953082,0.571242563048644,0,0.610953983535943,0.193952487167626,0.140271639780637,0.632365371242573,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.947457058852424,0.814824882210129,1.69745085775188,0.938760993154008,0.670025029767263,0,0.390267295715598,0.472905432318573,0.221464689648775,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0,0,0.827810238914197,8.99083303931635,6.56385444916338,1.3114795630134,0,0,0.390438744296638,2.58508077279359,0.477937595905104,0.445597348164788,1.69845918473299,0.404810701674894,0.584511715822624,1.58115111178609,4.17717711348349,2.6968616189571,0,0.325773918707152,0.494910368917606,1.32745138339963,0,1.209294227859,0.754420319023592,0.590603785761546,1.53717573971964,0.775284879504663,0.363533729477506,1.06949213515416,0.632073515871632,1.05418608574999,0,3.40439605753788,0.540183282093931,0.129358683782755,0.857348140126369,1.24138163549592,0.891844088010353,0.987294123612726,1.522324745573,0.23467170806371,0,0,0.98931751764888,0.484393280087717,1.08563264870681,0.835606408021955,0.820704498725306,0,7.97328798645192,0,0.206386867963223,0,0,0,0,0,0,0.138199973804424,0,0,0.813277868507395,0.540026704109006,0.209088296014469,1.09181281873089,0.404593039154462,0.330613822901344,0.26175594198403,0.129614973291793,0,2.81846469342095,1.49516546043979,1.48912641411388,1.75006069509643,2.32487682259916,1.68956125490778,1.99507305697782,2.0832701575032,1.78260885523708,0.241584120826006,0.864090018773596,0,0.405450430580328,0.410843828659309,0.649604114888975,0.179026695667481,0,0.120195449519969,0.147689527174577,0.504832249740738,0.228620419965,0,0.194915761479505,0.481059208201647,0.116876902181569,0,0,0.0897138566094757,0.671538465456314,0,0.375364950902364,0,0.428736758158132,0.501572104035363,8.471277639256,10.5874804396651,10.8850147553485,5.84300819968538,11.6464028361009,10.5755145634558,8.77529250301348,14.8605997063993,11.7817026335893,13.4617681055473,0.93408612825759,1.59609949360412,0.682934423016537,0.729320151204882,1.46729213839588,1.47074806760011,0.888986911206461,1.64828045791115,2.24643446714271,0.758091635291392,1.52087579934144,2.26351609663291,2.24739617927718,1.79270426733634,1.7230640686684,1.90517476513229,1.97003354106254,0.38581844092741,2.06042950401653,1.76638704161277,2.05721551431249,1.24233064311536,2.62279808942053,1.45346416632329,1.69396884747595,1.18460451048347,2.0122077016005,1.57841826862706,2.44447404922551,1.68342681497322,1.18635018124174,2.36410757701352,1.22769312950907,1.70430525304563,2.3148793317737,0.749431733813838,0.467863216890817,0.859484216193193,0.382576664137687,0.220591419119515,0.463735671240843
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27331726736501,4.05507724878058,4.03802854755699,0,0.436050312760893,0,0.58328969722285,0,0,0,0,0,0.771778308107841,0.573066879877513,1.03134418455488,4.65327859977075,7.93486468908049,1.90149421051854,0.338844532069132,0,0,0,0,0.299600110518405,0,1.24427534770173,0.945041568321835,0.630974884054146,3.71346279724945,4.8591079009355,1.71487118900936,1.24599112323707,0.919218786610021,8.8092704799511,10.4703617229854,13.8245879930619,4.3522474950964,3.93396867490361,6.77187381723788,6.14202597803038,7.31591393041184,13.4462458043593,10.9012576625257,12.9558229527184,5.40558392893372,0.075726193333184,0.68014404096107,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0,0.845060518660083,0,0,0,0.649473123033642,0.506719730950197,0.505524445014783,0.45673551887624,0,3.71105347662062,1.04091196059682,0.304465478312141,0.461230994512117,1.50722640552623,1.29347577849275,1.25666591329675,0,0.144599356919912,0,1.13236794963186,0.220841518460394,0,0,2.34224637609238,2.51336048176146,0,0,0,0,12.2828324311955,4.11750542536764,2.01046963380583,10.7771078519211,8.69432554923124,8.51930982694196,8.11206315338788,0.81471491080253,0.248813941220186,0,1.05220927943237,0.390361328888111,1.14951052216736,1.26043490863744,1.9591626318643,1.2246569847239,1.40925092313335,1.78033276663485,1.29351685369508,0.431135985865684,1.32374256117473,0.879755620819744,1.31517439456545,1.39023624612799,2.089512999133,1.02891068203972,0.398068533636986,0,0,0,0.414251545071004,1.40715635988658,0.540186184383045,0.710234206755631,0.983821158737019,0.771335564436891,0.465067889500816,1.3413670069981,0.700592054203017,0.658239399653922,0,0.405344047729279,0.146199987425332,0,0.134206418760372,8.41159794256509,2.57261530948211,0,0,0,0.232236671860439,0.644337306610467,0.201683524623343,0.22237804384487,0.570676878337677,0,0.164698954724011,0.251335208800269,0.397912944082302,0.58489226135736,0,0,0.199141273254367,0.189667900953082,0.571242563048644,0,0.610953983535943,0.193952487167626,0.140271639780637,0.632365371242573,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.947457058852424,0.814824882210129,1.69745085775188,0.938760993154008,0.670025029767263,0,0.390267295715598,0.472905432318573,0.221464689648775,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0,0,0.827810238914197,8.99083303931635,6.56385444916338,1.3114795630134,0,0,0.390438744296638,2.58508077279359,0.477937595905104,0.445597348164788,1.69845918473299,0.404810701674894,0.584511715822624,1.58115111178609,4.17717711348349,2.6968616189571,0,0.325773918707152,0.494910368917606,1.32745138339963,0,1.209294227859,0.754420319023592,0.590603785761546,1.53717573971964,0.775284879504663,0.363533729477506,1.06949213515416,0.632073515871632,1.05418608574999,0,3.40439605753788,0.540183282093931,0.129358683782755,0.857348140126369,1.24138163549592,0.891844088010353,0.987294123612726,1.522324745573,0.23467170806371,0,0,0.98931751764888,0.484393280087717,1.08563264870681,0.835606408021955,0.820704498725306,0,7.97328798645192,0,0.206386867963223,0,0,0,0,0,0,0.138199973804424,0,0,0.813277868507395,0.540026704109006,0.209088296014469,1.09181281873089,0.404593039154462,0.330613822901344,0.26175594198403,0.129614973291793,0,2.81846469342095,1.49516546043979,1.48912641411388,1.75006069509643,2.32487682259916,1.68956125490778,1.99507305697782,2.0832701575032,1.78260885523708,0.241584120826006,0.864090018773596,0,0.405450430580328,0.410843828659309,0.649604114888975,0.179026695667481,0,0.120195449519969,0.147689527174577,0.504832249740738,0.228620419965,0,0.194915761479505,0.481059208201647,0.116876902181569,0,0,0.0897138566094757,0.671538465456314,0,0.375364950902364,0,0.428736758158132,0.501572104035363,8.471277639256,10.5874804396651,10.8850147553485,5.84300819968538,11.6464028361009,10.5755145634558,8.77529250301348,14.8605997063993,11.7817026335893,13.4617681055473,0.93408612825759,1.59609949360412,0.682934423016537,0.729320151204882,1.46729213839588,1.47074806760011,0.888986911206461,1.64828045791115,2.24643446714271,0.758091635291392,1.52087579934144,2.26351609663291,2.24739617927718,1.79270426733634,1.7230640686684,1.90517476513229,1.97003354106254,0.38581844092741,2.06042950401653,1.76638704161277,2.05721551431249,1.24233064311536,2.62279808942053,1.45346416632329,1.69396884747595,1.18460451048347,2.0122077016005,1.57841826862706,2.44447404922551,1.68342681497322,1.18635018124174,2.36410757701352,1.22769312950907,1.70430525304563,2.3148793317737,0.749431733813838,0.467863216890817,0.859484216193193,0.382576664137687,0.220591419119515,0.463735671240843
|short_description=p5@Pak3
|short_description=p5@Pak3
}}
}}

Latest revision as of 16:03, 1 October 2015

Short description:p5@Pak3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Pak3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -18bp_to_ENSMUST00000126592_5end
EntrezGene:Pak3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Pak3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.06
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.04
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C34.65
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.82
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.35
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I613.45
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.90
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.96
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.41
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D73.71
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A412.28
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D510.78
cortex, neonate N30.CNhs11107.1392-42F28.69
diencephalon, adult.CNhs10482.20-12F28.52
diencephalon, neonate N30.CNhs11201.1388-42B28.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C61.22
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E88.41
hippocampus, neonate N00.CNhs11228.627-43G12.57
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C28.99
medulla oblongata, neonate N30.CNhs11200.1396-42A36.56
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I72.70
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H31.09
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C97.97
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I52.32
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B72.00
testis, neonate N07.CNhs11222.726-26I42.08
testis, neonate N10.CNhs11204.763-44D91.78
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.59
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.84
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A411.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.86
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.78
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.46
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.33e-1223
neuroblast (sensu Vertebrata)2.33e-1223
electrically responsive cell6.15e-1039
electrically active cell6.15e-1039
neuron4.80e-0933
neuronal stem cell4.80e-0933
neuroblast4.80e-0933
electrically signaling cell4.80e-0933

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.75e-2254
neurectoderm1.01e-2164
neural plate1.01e-2164
presumptive neural plate1.01e-2164
central nervous system1.60e-2073
neural tube2.08e-2052
neural rod2.08e-2052
future spinal cord2.08e-2052
neural keel2.08e-2052
nervous system1.87e-1975
gray matter2.75e-1834
ecto-epithelium1.66e-1773
ectoderm-derived structure1.96e-1795
ectoderm1.96e-1795
presumptive ectoderm1.96e-1795
brain2.07e-1647
future brain2.07e-1647
pre-chordal neural plate4.32e-1649
regional part of brain1.02e-1546
structure with developmental contribution from neural crest7.31e-1592
anterior neural tube2.74e-1440
brain grey matter2.95e-1429
regional part of telencephalon2.95e-1429
telencephalon2.95e-1429
regional part of forebrain1.90e-1339
forebrain1.90e-1339
future forebrain1.90e-1339
occipital lobe1.62e-1010
visual cortex1.62e-1010
neocortex1.62e-1010
regional part of cerebral cortex3.77e-0917
cerebral cortex1.21e-0821
cerebral hemisphere1.21e-0821
pallium1.21e-0821
basal ganglion2.66e-078
nuclear complex of neuraxis2.66e-078
aggregate regional part of brain2.66e-078
collection of basal ganglia2.66e-078
cerebral subcortex2.66e-078
posterior neural tube5.74e-0712
chordal neural plate5.74e-0712
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