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FFCP PHASE1:Mm9::chr11:53333470..53333479,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr11:53333470..53333479,+
|DHSsupport=NA
|short_description=p4@Sept8
|DPIdataset=NA
|description=CAGE_peak_4_at_Sept8_5end
|association_with_transcript=41bp_to_ENSMUST00000147912_5end
|EntrezGene=20362
|EntrezGene=20362
|HGNC=
|HGNC=
|MCL_coexpression_id=2683
|TSSclassifier=NA
|UniProt=B1AQY9
|UniProt=B1AQY9
|association_with_transcript=41bp_to_ENSMUST00000147912_5end
|cluster_id=chr11:53333470..53333479,+
|description=CAGE_peak_4_at_Sept8_5end
|id=chr11:53333470..53333479,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!9.83e-10!50;UBERON:0006238!9.83e-10!50;UBERON:0002616!3.00e-09!49;UBERON:0000033!1.26e-08!63;UBERON:0001049!1.67e-08!52;UBERON:0005068!1.67e-08!52;UBERON:0006241!1.67e-08!52;UBERON:0007135!1.67e-08!52;UBERON:0001017!3.98e-08!73;UBERON:0005743!3.98e-08!73;UBERON:0004121!4.43e-08!102;UBERON:0000924!4.43e-08!102;UBERON:0006601!4.43e-08!102;UBERON:0002021!4.68e-08!10;UBERON:0000411!4.68e-08!10;UBERON:0001950!4.68e-08!10;UBERON:0000073!5.26e-08!75;UBERON:0001016!5.26e-08!75;UBERON:0002346!4.45e-07!71;UBERON:0003075!4.45e-07!71;UBERON:0007284!4.45e-07!71
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.17e-20,54;UBERON:0002021,3.48e-20,10;UBERON:0000411,3.48e-20,10;UBERON:0001950,3.48e-20,10;UBERON:0000955,3.71e-20,47;UBERON:0006238,3.71e-20,47;UBERON:0002616,7.33e-19,46;UBERON:0001049,1.06e-17,52;UBERON:0005068,1.06e-17,52;UBERON:0006241,1.06e-17,52;UBERON:0007135,1.06e-17,52;UBERON:0001017,2.83e-17,73;UBERON:0001016,1.29e-16,75;UBERON:0002346,2.10e-14,64;UBERON:0003075,2.10e-14,64;UBERON:0007284,2.10e-14,64;UBERON:0004121,9.58e-14,95;UBERON:0000924,9.58e-14,95;UBERON:0006601,9.58e-14,95;UBERON:0002619,2.41e-13,17;UBERON:0000956,1.52e-12,21;UBERON:0001869,1.52e-12,21;UBERON:0000203,1.52e-12,21;UBERON:0004733,2.48e-12,6;UBERON:0004732,2.48e-12,6;UBERON:0002028,2.48e-12,6;UBERON:0007277,2.48e-12,6;UBERON:0010371,7.81e-12,73;UBERON:0003528,2.81e-11,29;UBERON:0002791,2.81e-11,29;UBERON:0001893,2.81e-11,29;UBERON:0003080,3.00e-11,40;UBERON:0010314,7.00e-11,92;UBERON:0002780,3.99e-10,39;UBERON:0001890,3.99e-10,39;UBERON:0006240,3.99e-10,39;UBERON:0003056,1.86e-09,49;UBERON:0002020,4.11e-09,34;UBERON:0002037,8.03e-09,4;UBERON:0002680,8.03e-09,4;UBERON:0001895,8.03e-09,4;UBERON:0010092,8.03e-09,4;UBERON:0006215,8.03e-09,4;UBERON:0004111,9.11e-09,122;UBERON:0000025,3.55e-08,114;UBERON:0003076,9.65e-08,12;UBERON:0003057,9.65e-08,12
|phase1_expression=0,0,0,0,0,0.503637815735669,0,0,0,0,0,0,0.171200729931206,0,0,0.404950534779652,0,0,0.137114433605739,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0.221730510655305,0.635030673459631,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,1.38486499773135,1.4192770370732,0.183546752161682,1.56478268869608,1.74420125104357,0.659058548203415,0.972149495371417,0.419959264876088,0,0,0,0,0,1.43266719969378,1.03134418455488,0,0,0,0,0,0,0,0,0.299600110518405,1.53687322128622,0.103689612308478,0.135005938331691,0.210324961351382,0.571301968807607,0.441737081903227,0,0,0,3.30347642998166,1.40456071893706,2.30409799884365,0,0,0,0.837548997004143,0.56276261003168,1.5279824777681,0.294628585473668,0.427115042397309,0,0.227178579999552,0.151143120213571,0.289864488701678,0,0,0,0,0,0.280888840263504,0.340860645156116,1.03914401841148,0.70667914902068,0.14084341977668,0,2.54805239706646,0,0.216491041011214,0,0.505524445014783,0.34255163915718,0,0.148442139064825,0,0.608930956624282,0.230615497256059,0.150722640552623,0.23517741427141,0.376999773989026,0.494389935468748,0.433798070759735,1.76922110389975,0.808834249737046,0.441683036920787,0,0,3.80615036115011,3.97948742945565,0.255457055208591,0,0,0,2.69623150928681,1.37250180845588,0,5.9100268865374,3.83573185995496,1.87009240103604,2.27137768294861,0.712875546952214,0.248813941220186,0,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0.544291993210623,0.640568601424249,0.281105173679186,1.03481348295606,0,0.189106080167819,0.175951124163949,0,1.11218899690239,0,0.61734640922383,0.199034266818493,0,0,0,0,0.234526059981096,0.540186184383045,0,0.196764231747404,0.308534225774757,0,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0.243206428637567,0,0.439100230582101,0.134206418760372,3.15434922846191,0.308713837137853,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0.397912944082302,0.38992817423824,0,0,0,0.569003702859245,0.342745537829186,1.1270773567308,0.407302655690628,0,0.280543279561274,0.0632365371242573,0,0.156998727841375,0.246794327843601,0,0.166845105716094,0.196558995113203,0.449724224769707,0,0.72353147925725,0,0,0.486405680325106,0,1.43768206527355,0,0,0,0.179397413521912,0,0,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0,0.195133647857799,0.315270288212382,0.221464689648775,0.637819074629948,0.163863314715738,0,0.433947175744535,0,0,0,0.275936746304732,2.88991061978026,2.10981035865966,0.163934945376675,0,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0.566153061577665,0.809621403349789,0,0.395287777946524,1.60660658210904,0.283880170416537,0.35613120733451,0.651547837414304,0.329940245945071,0,0.242780636154981,0,0,0.295301892880773,0.614870295887855,0.258428293168221,0,0.712994756769443,0,1.05418608574999,0,0,0.540183282093931,0.258717367565509,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0.23467170806371,1.48282449604674,0.220528398054962,0.49465875882444,0.484393280087717,0.482503399425247,0.238744688006273,0,0,2.78137953015765,0.512612642393558,0.619160603889667,0.185194527369712,0,0.546776910884101,0.686334519619568,0,0.139951452323658,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0.436725127492355,0.674321731924103,0.578574190077352,1.30877970992015,0,0,0,0.299033092087958,0,0.583353565032143,0,0,0.469428954583016,0.13020438484395,0.314578033277133,0,0,0,0.608175645870493,1.1298205288131,0.77952493786677,0.537080087002444,0,0.360586348559907,0.443068581523732,0.302899349844443,0.15241361331,0.302478555410522,0.0974578807397524,0.0962118416403295,0,3.17422537061296,0,0.358855426437903,0.503653849092235,0.386379188064381,0.563047426353546,0.183151624267265,1.2862102744744,0,2.82375921308533,2.30162618253588,1.14579102687879,2.57779773515531,5.48066015816514,3.0215755895588,4.72515750162264,3.60256962579376,3.62513927187364,3.62432218226274,0.103787347584177,0,0.170733605754134,0.486213434136588,0.419226325255965,0.367687016900028,0.44449345560323,0.412070114477788,0.64183841918363,0.505394423527595,0.25347929989024,0,0.0936415074698824,0.384150914429216,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.290692833264657,0.0941093804153306,0.25384382367503,0.182927972872773,0.526139422875686,0.135804113845862,0,0.118635018124174,0.29551344712669,0.409231043169689,0.309873682371932,0.385813221962283,0.499621155875892,0,0.859484216193193,0.765153328275374,0.220591419119515,0.231867835620421
|phase1_expression=0,0,0,0,0,0.503637815735669,0,0,0,0,0,0,0.171200729931206,0,0,0.404950534779652,0,0,0.137114433605739,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0.221730510655305,0.635030673459631,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,1.38486499773135,1.4192770370732,0.183546752161682,1.56478268869608,1.74420125104357,0.659058548203415,0.972149495371417,0.419959264876088,0,0,0,0,0,1.43266719969378,1.03134418455488,0,0,0,0,0,0,0,0,0.299600110518405,1.53687322128622,0.103689612308478,0.135005938331691,0.210324961351382,0.571301968807607,0.441737081903227,0,0,0,3.30347642998166,1.40456071893706,2.30409799884365,0,0,0,0.837548997004143,0.56276261003168,1.5279824777681,0.294628585473668,0.427115042397309,0,0.227178579999552,0.151143120213571,0.289864488701678,0,0,0,0,0,0.280888840263504,0.340860645156116,1.03914401841148,0.70667914902068,0.14084341977668,0,2.54805239706646,0,0.216491041011214,0,0.505524445014783,0.34255163915718,0,0.148442139064825,0,0.608930956624282,0.230615497256059,0.150722640552623,0.23517741427141,0.376999773989026,0.494389935468748,0.433798070759735,1.76922110389975,0.808834249737046,0.441683036920787,0,0,3.80615036115011,3.97948742945565,0.255457055208591,0,0,0,2.69623150928681,1.37250180845588,0,5.9100268865374,3.83573185995496,1.87009240103604,2.27137768294861,0.712875546952214,0.248813941220186,0,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0.544291993210623,0.640568601424249,0.281105173679186,1.03481348295606,0,0.189106080167819,0.175951124163949,0,1.11218899690239,0,0.61734640922383,0.199034266818493,0,0,0,0,0.234526059981096,0.540186184383045,0,0.196764231747404,0.308534225774757,0,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0.243206428637567,0,0.439100230582101,0.134206418760372,3.15434922846191,0.308713837137853,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0.397912944082302,0.38992817423824,0,0,0,0.569003702859245,0.342745537829186,1.1270773567308,0.407302655690628,0,0.280543279561274,0.0632365371242573,0,0.156998727841375,0.246794327843601,0,0.166845105716094,0.196558995113203,0.449724224769707,0,0.72353147925725,0,0,0.486405680325106,0,1.43768206527355,0,0,0,0.179397413521912,0,0,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0,0.195133647857799,0.315270288212382,0.221464689648775,0.637819074629948,0.163863314715738,0,0.433947175744535,0,0,0,0.275936746304732,2.88991061978026,2.10981035865966,0.163934945376675,0,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0.566153061577665,0.809621403349789,0,0.395287777946524,1.60660658210904,0.283880170416537,0.35613120733451,0.651547837414304,0.329940245945071,0,0.242780636154981,0,0,0.295301892880773,0.614870295887855,0.258428293168221,0,0.712994756769443,0,1.05418608574999,0,0,0.540183282093931,0.258717367565509,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0.23467170806371,1.48282449604674,0.220528398054962,0.49465875882444,0.484393280087717,0.482503399425247,0.238744688006273,0,0,2.78137953015765,0.512612642393558,0.619160603889667,0.185194527369712,0,0.546776910884101,0.686334519619568,0,0.139951452323658,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0.436725127492355,0.674321731924103,0.578574190077352,1.30877970992015,0,0,0,0.299033092087958,0,0.583353565032143,0,0,0.469428954583016,0.13020438484395,0.314578033277133,0,0,0,0.608175645870493,1.1298205288131,0.77952493786677,0.537080087002444,0,0.360586348559907,0.443068581523732,0.302899349844443,0.15241361331,0.302478555410522,0.0974578807397524,0.0962118416403295,0,3.17422537061296,0,0.358855426437903,0.503653849092235,0.386379188064381,0.563047426353546,0.183151624267265,1.2862102744744,0,2.82375921308533,2.30162618253588,1.14579102687879,2.57779773515531,5.48066015816514,3.0215755895588,4.72515750162264,3.60256962579376,3.62513927187364,3.62432218226274,0.103787347584177,0,0.170733605754134,0.486213434136588,0.419226325255965,0.367687016900028,0.44449345560323,0.412070114477788,0.64183841918363,0.505394423527595,0.25347929989024,0,0.0936415074698824,0.384150914429216,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.290692833264657,0.0941093804153306,0.25384382367503,0.182927972872773,0.526139422875686,0.135804113845862,0,0.118635018124174,0.29551344712669,0.409231043169689,0.309873682371932,0.385813221962283,0.499621155875892,0,0.859484216193193,0.765153328275374,0.220591419119515,0.231867835620421
|short_description=p4@Sept8
}}
}}

Latest revision as of 16:28, 1 October 2015

Short description:p4@Sept8
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Sept8_5end
Coexpression cluster:MCL_coexpression_mm9:2683
Association with transcript: 41bp_to_ENSMUST00000147912_5end
EntrezGene:Sept8
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Sept8

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.42
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.70
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D55.91
cortex, neonate N30.CNhs11107.1392-42F23.84
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B22.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C22.89
medulla oblongata, neonate N30.CNhs11200.1396-42A32.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.17e-2054
occipital lobe3.48e-2010
visual cortex3.48e-2010
neocortex3.48e-2010
brain3.71e-2047
future brain3.71e-2047
regional part of brain7.33e-1946
neural tube1.06e-1752
neural rod1.06e-1752
future spinal cord1.06e-1752
neural keel1.06e-1752
central nervous system2.83e-1773
nervous system1.29e-1675
neurectoderm2.10e-1464
neural plate2.10e-1464
presumptive neural plate2.10e-1464
ectoderm-derived structure9.58e-1495
ectoderm9.58e-1495
presumptive ectoderm9.58e-1495
regional part of cerebral cortex2.41e-1317
cerebral cortex1.52e-1221
cerebral hemisphere1.52e-1221
pallium1.52e-1221
segmental subdivision of hindbrain2.48e-126
segmental subdivision of nervous system2.48e-126
hindbrain2.48e-126
presumptive hindbrain2.48e-126
ecto-epithelium7.81e-1273
brain grey matter2.81e-1129
regional part of telencephalon2.81e-1129
telencephalon2.81e-1129
anterior neural tube3.00e-1140
structure with developmental contribution from neural crest7.00e-1192
regional part of forebrain3.99e-1039
forebrain3.99e-1039
future forebrain3.99e-1039
pre-chordal neural plate1.86e-0949
gray matter4.11e-0934
cerebellum8.03e-094
regional part of metencephalon8.03e-094
metencephalon8.03e-094
future metencephalon8.03e-094
rhombic lip8.03e-094
anatomical conduit9.11e-09122
tube3.55e-08114
posterior neural tube9.65e-0812
chordal neural plate9.65e-0812
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