FFCP PHASE1:Mm9::chr16:17509040..17509100,+: Difference between revisions
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{{FFCP|EntrezGene=66863|HGNC=|MCL_coexpression_id=1683|UniProt=Q9CQ33,Q3V0X6|association_with_transcript=0bp_to_ENSMUST00000023444,ENSMUST00000138223,ENSMUST00000147888,NM_025808,uc007ykz.1,uc007yla.1_5end|description=CAGE_peak_1_at_Lztr1_5end|id=chr16:17509040..17509100,+|ontology_enrichment_celltype=CL:0000055!4.28e-17!50;CL:0000221!2.62e-16!44;CL:0000133!2.62e-16!44;CL:0002319!2.88e-16!43;CL:0000393!1.96e-12!39;CL:0000211!1.96e-12!39;CL:0000117!2.36e-11!23;CL:0000337!2.36e-11!23;CL:0000540!4.10e-11!33;CL:0000047!4.10e-11!33;CL:0000031!4.10e-11!33;CL:0000404!4.10e-11!33;CL:0002321!6.10e-11!70;CL:0000220!6.10e-11!70|ontology_enrichment_celltype_v019_2=CL:0000221,2.62e-16,44;CL:0000133,2.62e-16,44;CL:0002319,2.88e-16,43;CL:0000393,1.96e-12,39;CL:0000211,1.96e-12,39;CL:0000117,2.36e-11,23;CL:0000337,2.36e-11,23;CL:0000540,4.10e-11,33;CL:0000047,4.10e-11,33;CL:0000031,4.10e-11,33;CL:0000404,4.10e-11,33;CL:0002321,6.10e-11,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.33e-32!75;UBERON:0001016!4.33e-32!75;UBERON:0001017!4.06e-31!73;UBERON:0005743!4.06e-31!73;UBERON:0000955!1.17e-24!50;UBERON:0006238!1.17e-24!50;UBERON:0002616!1.45e-24!49;UBERON:0001049!1.99e-24!52;UBERON:0005068!1.99e-24!52;UBERON:0006241!1.99e-24!52;UBERON:0007135!1.99e-24!52;UBERON:0004121!1.18e-23!102;UBERON:0000924!1.18e-23!102;UBERON:0006601!1.18e-23!102;UBERON:0000033!1.10e-21!63;UBERON:0003080!1.60e-19!40;UBERON:0002780!4.26e-19!39;UBERON:0001890!4.26e-19!39;UBERON:0006240!4.26e-19!39;UBERON:0002346!1.10e-18!71;UBERON:0003075!1.10e-18!71;UBERON:0007284!1.10e-18!71;UBERON:0002020!4.43e-17!34;UBERON:0003056!5.02e-17!49;UBERON:0002791!7.40e-16!29;UBERON:0003528!7.40e-16!29;UBERON:0001893!7.40e-16!29;UBERON:0000956!1.22e-11!21;UBERON:0001869!1.22e-11!21;UBERON:0000203!1.22e-11!21;UBERON:0000153!2.22e-11!94;UBERON:0007811!1.42e-10!86;UBERON:0004111!2.84e-10!122;UBERON:0002619!3.85e-10!17;UBERON:0000025!1.26e-09!114;UBERON:0000475!1.21e-07!200;UBERON:0002021!2.97e-07!10;UBERON:0000411!2.97e-07!10;UBERON:0001950!2.97e-07!10;UBERON:0000479!4.95e-07!349|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.33e-32,75;UBERON:0001017,4.06e-31,73;UBERON:0004121,4.19e-26,95;UBERON:0000924,4.19e-26,95;UBERON:0006601,4.19e-26,95;UBERON:0000073,4.92e-26,54;UBERON:0001049,1.99e-24,52;UBERON:0005068,1.99e-24,52;UBERON:0006241,1.99e-24,52;UBERON:0007135,1.99e-24,52;UBERON:0000955,1.12e-22,47;UBERON:0006238,1.12e-22,47;UBERON:0002616,1.38e-22,46;UBERON:0002346,1.38e-21,64;UBERON:0003075,1.38e-21,64;UBERON:0007284,1.38e-21,64;UBERON:0003080,1.60e-19,40;UBERON:0002780,4.26e-19,39;UBERON:0001890,4.26e-19,39;UBERON:0006240,4.26e-19,39;UBERON:0010371,5.43e-18,73;UBERON:0002020,4.43e-17,34;UBERON:0003056,5.02e-17,49;UBERON:0003528,7.40e-16,29;UBERON:0002791,7.40e-16,29;UBERON:0001893,7.40e-16,29;UBERON:0010314,9.89e-14,92;UBERON:0000956,1.22e-11,21;UBERON:0001869,1.22e-11,21;UBERON:0000203,1.22e-11,21;UBERON:0004111,2.84e-10,122;UBERON:0002619,3.85e-10,17;UBERON:0000025,1.26e-09,114;UBERON:0002021,2.97e-07,10;UBERON:0000411,2.97e-07,10;UBERON:0001950,2.97e-07,10;UBERON:0000479,4.95e-07,349|phase1_expression=38.4357233051506,15.0059425284925,20.4749657725291,30.246421130683,21.5385163876929,20.4812711732506,22.1932008565749,36.2836538870829,3.801295498095,7.49006484230379,13.0125655851384,13.5612670292072,27.2209160590617,29.7229368224591,19.3203661853084,14.5782192520675,18.88817070946,19.4009231695316,21.9383093769182,20.7950929381035,33.1668831589172,16.9787526553514,21.4183827093927,15.8392498565473,20.4174260149781,13.2073351746455,17.230479846363,14.2211013572687,26.2232318849796,25.7070732355129,19.7340154483221,29.8464416526027,31.9833689543976,0,23.3969811998532,21.7767385419625,29.6045566580435,14.6486070757918,17.9707129240474,12.0410461113974,15.2940186888064,10.2456822743767,14.5653105909346,41.7977435678917,40.2466416941473,43.1334867579952,70.4152209913235,74.5646034821127,65.2467962721381,65.9117357861821,70.1331972343066,46.0008205967909,15.4359997573117,13.0565185562042,12.4354705682712,33.1864672486372,55.8740207880576,40.2224231976405,64.9435839359309,70.8847912224524,70.3552857891859,72.1738853307251,69.3649940966689,41.3953869949444,43.5101199529469,49.0231279312809,63.5152234299018,76.8436610643109,49.5636346834523,43.7419240194678,46.0611665359527,39.7054868321287,43.9528396493711,46.9139760993274,48.4019628642094,57.9107835564313,88.092704799511,70.1003486087681,62.0570394355224,72.9331171147972,74.4709418923615,80.7415724362978,67.5622857583342,48.3975844627245,64.0224658184834,40.6587447953661,40.4335573469452,52.9374426143854,39.6047991132553,70.5082655796309,32.1749582458862,25.8127163094416,4.75979933595425,27.5248627735287,33.1385972898311,21.9533174677694,24.4373291029248,46.8683387089659,44.4234067870906,50.1742195804683,35.4925417837235,53.8971205140135,43.3168907501298,42.6640021891999,27.7108532494354,24.0691872201344,30.331466700887,19.5254434319593,20.1971549244794,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66863 | |||
|HGNC= | |||
|MCL_coexpression_id=1683 | |||
|TSSclassifier=NA | |||
|UniProt=Q9CQ33,Q3V0X6 | |||
|association_with_transcript=0bp_to_ENSMUST00000023444,ENSMUST00000138223,ENSMUST00000147888,NM_025808,uc007ykz.1,uc007yla.1_5end | |||
|cluster_id=chr16:17509040..17509100,+ | |||
|description=CAGE_peak_1_at_Lztr1_5end | |||
|id=chr16:17509040..17509100,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.28e-17!50;CL:0000221!2.62e-16!44;CL:0000133!2.62e-16!44;CL:0002319!2.88e-16!43;CL:0000393!1.96e-12!39;CL:0000211!1.96e-12!39;CL:0000117!2.36e-11!23;CL:0000337!2.36e-11!23;CL:0000540!4.10e-11!33;CL:0000047!4.10e-11!33;CL:0000031!4.10e-11!33;CL:0000404!4.10e-11!33;CL:0002321!6.10e-11!70;CL:0000220!6.10e-11!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.62e-16,44;CL:0000133,2.62e-16,44;CL:0002319,2.88e-16,43;CL:0000393,1.96e-12,39;CL:0000211,1.96e-12,39;CL:0000117,2.36e-11,23;CL:0000337,2.36e-11,23;CL:0000540,4.10e-11,33;CL:0000047,4.10e-11,33;CL:0000031,4.10e-11,33;CL:0000404,4.10e-11,33;CL:0002321,6.10e-11,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.33e-32!75;UBERON:0001016!4.33e-32!75;UBERON:0001017!4.06e-31!73;UBERON:0005743!4.06e-31!73;UBERON:0000955!1.17e-24!50;UBERON:0006238!1.17e-24!50;UBERON:0002616!1.45e-24!49;UBERON:0001049!1.99e-24!52;UBERON:0005068!1.99e-24!52;UBERON:0006241!1.99e-24!52;UBERON:0007135!1.99e-24!52;UBERON:0004121!1.18e-23!102;UBERON:0000924!1.18e-23!102;UBERON:0006601!1.18e-23!102;UBERON:0000033!1.10e-21!63;UBERON:0003080!1.60e-19!40;UBERON:0002780!4.26e-19!39;UBERON:0001890!4.26e-19!39;UBERON:0006240!4.26e-19!39;UBERON:0002346!1.10e-18!71;UBERON:0003075!1.10e-18!71;UBERON:0007284!1.10e-18!71;UBERON:0002020!4.43e-17!34;UBERON:0003056!5.02e-17!49;UBERON:0002791!7.40e-16!29;UBERON:0003528!7.40e-16!29;UBERON:0001893!7.40e-16!29;UBERON:0000956!1.22e-11!21;UBERON:0001869!1.22e-11!21;UBERON:0000203!1.22e-11!21;UBERON:0000153!2.22e-11!94;UBERON:0007811!1.42e-10!86;UBERON:0004111!2.84e-10!122;UBERON:0002619!3.85e-10!17;UBERON:0000025!1.26e-09!114;UBERON:0000475!1.21e-07!200;UBERON:0002021!2.97e-07!10;UBERON:0000411!2.97e-07!10;UBERON:0001950!2.97e-07!10;UBERON:0000479!4.95e-07!349 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.33e-32,75;UBERON:0001017,4.06e-31,73;UBERON:0004121,4.19e-26,95;UBERON:0000924,4.19e-26,95;UBERON:0006601,4.19e-26,95;UBERON:0000073,4.92e-26,54;UBERON:0001049,1.99e-24,52;UBERON:0005068,1.99e-24,52;UBERON:0006241,1.99e-24,52;UBERON:0007135,1.99e-24,52;UBERON:0000955,1.12e-22,47;UBERON:0006238,1.12e-22,47;UBERON:0002616,1.38e-22,46;UBERON:0002346,1.38e-21,64;UBERON:0003075,1.38e-21,64;UBERON:0007284,1.38e-21,64;UBERON:0003080,1.60e-19,40;UBERON:0002780,4.26e-19,39;UBERON:0001890,4.26e-19,39;UBERON:0006240,4.26e-19,39;UBERON:0010371,5.43e-18,73;UBERON:0002020,4.43e-17,34;UBERON:0003056,5.02e-17,49;UBERON:0003528,7.40e-16,29;UBERON:0002791,7.40e-16,29;UBERON:0001893,7.40e-16,29;UBERON:0010314,9.89e-14,92;UBERON:0000956,1.22e-11,21;UBERON:0001869,1.22e-11,21;UBERON:0000203,1.22e-11,21;UBERON:0004111,2.84e-10,122;UBERON:0002619,3.85e-10,17;UBERON:0000025,1.26e-09,114;UBERON:0002021,2.97e-07,10;UBERON:0000411,2.97e-07,10;UBERON:0001950,2.97e-07,10;UBERON:0000479,4.95e-07,349 | |||
|phase1_expression=38.4357233051506,15.0059425284925,20.4749657725291,30.246421130683,21.5385163876929,20.4812711732506,22.1932008565749,36.2836538870829,3.801295498095,7.49006484230379,13.0125655851384,13.5612670292072,27.2209160590617,29.7229368224591,19.3203661853084,14.5782192520675,18.88817070946,19.4009231695316,21.9383093769182,20.7950929381035,33.1668831589172,16.9787526553514,21.4183827093927,15.8392498565473,20.4174260149781,13.2073351746455,17.230479846363,14.2211013572687,26.2232318849796,25.7070732355129,19.7340154483221,29.8464416526027,31.9833689543976,0,23.3969811998532,21.7767385419625,29.6045566580435,14.6486070757918,17.9707129240474,12.0410461113974,15.2940186888064,10.2456822743767,14.5653105909346,41.7977435678917,40.2466416941473,43.1334867579952,70.4152209913235,74.5646034821127,65.2467962721381,65.9117357861821,70.1331972343066,46.0008205967909,15.4359997573117,13.0565185562042,12.4354705682712,33.1864672486372,55.8740207880576,40.2224231976405,64.9435839359309,70.8847912224524,70.3552857891859,72.1738853307251,69.3649940966689,41.3953869949444,43.5101199529469,49.0231279312809,63.5152234299018,76.8436610643109,49.5636346834523,43.7419240194678,46.0611665359527,39.7054868321287,43.9528396493711,46.9139760993274,48.4019628642094,57.9107835564313,88.092704799511,70.1003486087681,62.0570394355224,72.9331171147972,74.4709418923615,80.7415724362978,67.5622857583342,48.3975844627245,64.0224658184834,40.6587447953661,40.4335573469452,52.9374426143854,39.6047991132553,70.5082655796309,32.1749582458862,25.8127163094416,4.75979933595425,27.5248627735287,33.1385972898311,21.9533174677694,24.4373291029248,46.8683387089659,44.4234067870906,50.1742195804683,35.4925417837235,53.8971205140135,43.3168907501298,42.6640021891999,27.7108532494354,24.0691872201344,30.331466700887,19.5254434319593,20.1971549244794,32.0635020380021,28.104622936114,28.6197549613413,26.9820131789588,22.759118723446,21.8714995272411,28.274983049177,59.5739872239841,28.0522752424629,24.7690954545965,26.0444628415329,21.863310327579,16.0008833534623,16.775258509631,42.7459963636859,53.6183569442445,26.0566196312763,12.5805880731216,10.1983464268879,12.4528822531603,50.6292361188301,56.7300747495097,44.6072950000669,69.182079436526,77.2260681137598,57.7650763875577,69.9259843822035,37.680564624617,24.6325801807984,19.459652399393,30.5140691035387,30.1879427673473,36.5544346049222,30.0703756774933,32.250831016843,25.9899426758072,30.2348379872245,30.4530604819119,31.0444044886819,32.5507669328592,34.4173065905431,37.4775894469211,36.1672958505498,46.4338906206748,39.3524948170048,42.5969022364443,39.6078190968801,11.937624184325,14.1541348913093,11.3665399758237,26.5120988845442,24.1561841780529,24.488440358698,26.5154103855435,29.1211062986158,29.4650185614892,21.1605889722871,27.9004337455604,24.9877832665743,24.6839774870221,23.1476124351524,22.2128538155645,25.0001978497318,23.2723122208514,28.7201736147196,70.2368428204185,42.6025095250238,18.1730330641089,16.3959351331397,30.7135080770737,35.7644474665075,23.1961430379768,22.1851877085677,19.3468898145037,20.5443676201564,24.6755112003146,10.5407331023367,20.6094871216221,16.5133871794155,26.5151158482003,14.3811105384675,23.1267713365923,20.7106924184542,28.6398530439153,31.8753350181143,30.4310886317317,37.8791469792285,30.6444929724849,32.8235637086691,32.8197627674895,29.6696397439,31.399745568275,28.9983335216231,21.6410417773619,15.5165948315967,17.2971915699619,13.9414509678609,16.4316698324687,15.4353382241547,28.2634695477376,26.7557407829254,16.3756579042786,21.9649130550465,20.1275489138296,22.7005978077787,24.0269008298212,21.2166257475574,22.2452792767171,28.4641677604387,41.1999614071528,33.3504884716053,25.7484662778401,30.2146252679835,34.2647762501213,36.1813516074322,41.1815498732804,51.7104166823167,34.2068262710434,29.2333390336383,38.1096897091394,38.0162890140512,36.9545861193017,45.9984006289207,36.1899081454253,19.0366989336548,25.0799779239708,28.1455481230827,56.5138076757028,52.1592005335304,32.7869890753351,27.771801992481,30.6042972833769,25.3785183792815,43.5155263420254,35.6063508949303,42.1089494015725,38.2153316564924,29.9559919239422,38.8700291022045,37.1570511269732,37.5945940213514,29.2396575529033,43.6260728984775,35.6722440984332,35.7985166850402,78.3196316205781,33.5037277893874,40.5113566332766,46.9626648592186,58.469774790393,51.034234558692,38.2473873888967,34.8992380298405,43.492680162936,51.513991543538,71.6846538309992,61.8813259489121,52.7681388918371,39.4333795928569,45.7929740590951,37.7233181655602,39.1921916349425,44.9489420357218,43.2763924183578,55.7170856879717,24.8752010547533,30.7156502752539,30.4329189315847,22.7543029059242,25.3499149912572,23.3411019471963,21.845138952574,23.6362895632888,21.569581910609,46.5417508046379,16.7453463181896,31.3708039304098,20.556592538038,23.169320211577,15.4464477324758,15.0993594316305,9.68877050964975,10.9162132812453,10.7795979567451,19.0934123603023,31.6335993581135,34.7676288786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| |||
|short_description=p1@Lztr1 | |||
}} |
Latest revision as of 16:39, 1 October 2015
Short description: | p1@Lztr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lztr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1683 |
Association with transcript: | 0bp_to_ENSMUST00000023444, ENSMUST00000138223, ENSMUST00000147888, NM_025808, uc007ykz.1, uc007yla.1_5end |
EntrezGene: | Lztr1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.62e-16 | 44 |
neurectodermal cell | 2.62e-16 | 44 |
neural cell | 2.88e-16 | 43 |
electrically responsive cell | 1.96e-12 | 39 |
electrically active cell | 1.96e-12 | 39 |
CNS neuron (sensu Vertebrata) | 2.36e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.36e-11 | 23 |
neuron | 4.10e-11 | 33 |
neuronal stem cell | 4.10e-11 | 33 |
neuroblast | 4.10e-11 | 33 |
electrically signaling cell | 4.10e-11 | 33 |
embryonic cell | 6.10e-11 | 70 |