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FFCP PHASE1:Mm9::chrX:148578783..148578794,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=245666
|EntrezGene=245666
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q5DU25,A4GZ26
|UniProt=Q5DU25,A4GZ26
|association_with_transcript=-16bp_to_ENSMUST00000080074,ENSMUST00000168786,NM_001114664,uc009upy.1_5end
|association_with_transcript=-16bp_to_ENSMUST00000080074,ENSMUST00000168786,NM_001114664,uc009upy.1_5end
|cluster_id=chrX:148578783..148578794,+
|description=CAGE_peak_4_at_Iqsec2_5end
|description=CAGE_peak_4_at_Iqsec2_5end
|id=chrX:148578783..148578794,+
|id=chrX:148578783..148578794,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!3.76e-11!52;UBERON:0005068!3.76e-11!52;UBERON:0006241!3.76e-11!52;UBERON:0007135!3.76e-11!52;UBERON:0002020!4.00e-11!34;UBERON:0004121!6.75e-11!102;UBERON:0000924!6.75e-11!102;UBERON:0006601!6.75e-11!102;UBERON:0000955!6.93e-11!50;UBERON:0006238!6.93e-11!50;UBERON:0001017!1.76e-10!73;UBERON:0005743!1.76e-10!73;UBERON:0002616!2.54e-10!49;UBERON:0000073!3.26e-10!75;UBERON:0001016!3.26e-10!75;UBERON:0002346!8.97e-10!71;UBERON:0003075!8.97e-10!71;UBERON:0007284!8.97e-10!71;UBERON:0000956!2.40e-09!21;UBERON:0001869!2.40e-09!21;UBERON:0000203!2.40e-09!21;UBERON:0002791!2.56e-09!29;UBERON:0003528!2.56e-09!29;UBERON:0001893!2.56e-09!29;UBERON:0002021!1.19e-08!10;UBERON:0000411!1.19e-08!10;UBERON:0001950!1.19e-08!10;UBERON:0002619!6.84e-08!17;UBERON:0003080!2.50e-07!40;UBERON:0000033!2.53e-07!63;UBERON:0002780!7.05e-07!39;UBERON:0001890!7.05e-07!39;UBERON:0006240!7.05e-07!39
|ontology_enrichment_uberon=UBERON:0001049!3.76e-11!52;UBERON:0005068!3.76e-11!52;UBERON:0006241!3.76e-11!52;UBERON:0007135!3.76e-11!52;UBERON:0002020!4.00e-11!34;UBERON:0004121!6.75e-11!102;UBERON:0000924!6.75e-11!102;UBERON:0006601!6.75e-11!102;UBERON:0000955!6.93e-11!50;UBERON:0006238!6.93e-11!50;UBERON:0001017!1.76e-10!73;UBERON:0005743!1.76e-10!73;UBERON:0002616!2.54e-10!49;UBERON:0000073!3.26e-10!75;UBERON:0001016!3.26e-10!75;UBERON:0002346!8.97e-10!71;UBERON:0003075!8.97e-10!71;UBERON:0007284!8.97e-10!71;UBERON:0000956!2.40e-09!21;UBERON:0001869!2.40e-09!21;UBERON:0000203!2.40e-09!21;UBERON:0002791!2.56e-09!29;UBERON:0003528!2.56e-09!29;UBERON:0001893!2.56e-09!29;UBERON:0002021!1.19e-08!10;UBERON:0000411!1.19e-08!10;UBERON:0001950!1.19e-08!10;UBERON:0002619!6.84e-08!17;UBERON:0003080!2.50e-07!40;UBERON:0000033!2.53e-07!63;UBERON:0002780!7.05e-07!39;UBERON:0001890!7.05e-07!39;UBERON:0006240!7.05e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.67e-22,54;UBERON:0002021,4.08e-20,10;UBERON:0000411,4.08e-20,10;UBERON:0001950,4.08e-20,10;UBERON:0001049,7.17e-20,52;UBERON:0005068,7.17e-20,52;UBERON:0006241,7.17e-20,52;UBERON:0007135,7.17e-20,52;UBERON:0000955,2.99e-19,47;UBERON:0006238,2.99e-19,47;UBERON:0001017,8.37e-19,73;UBERON:0001016,4.40e-18,75;UBERON:0002616,6.40e-18,46;UBERON:0002619,9.44e-16,17;UBERON:0002020,3.26e-15,34;UBERON:0003528,7.08e-15,29;UBERON:0002791,7.08e-15,29;UBERON:0001893,7.08e-15,29;UBERON:0002346,8.02e-15,64;UBERON:0003075,8.02e-15,64;UBERON:0007284,8.02e-15,64;UBERON:0000956,1.85e-14,21;UBERON:0001869,1.85e-14,21;UBERON:0000203,1.85e-14,21;UBERON:0003080,6.95e-14,40;UBERON:0004121,1.33e-13,95;UBERON:0000924,1.33e-13,95;UBERON:0006601,1.33e-13,95;UBERON:0010371,2.92e-13,73;UBERON:0010314,6.18e-13,92;UBERON:0002780,8.48e-13,39;UBERON:0001890,8.48e-13,39;UBERON:0006240,8.48e-13,39;UBERON:0000025,1.45e-10,114;UBERON:0003056,2.11e-10,49;UBERON:0004111,4.05e-10,122;UBERON:0003076,7.39e-07,12;UBERON:0003057,7.39e-07,12
|phase1_expression=0,0,0,0.90739263392049,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0.430761996159075,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0.881277725829041,0.101376931219515,0,0,0.218025156380447,2.63623419281366,0.777719596297134,0.139986421625363,0,0,0,0,0,0,0.515672092277442,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0.449949858640699,0,0,0.898800331555214,3.07374644257244,0.518448061542388,0.675029691658453,0.630974884054146,1.14260393761521,0.662605622854841,0,0.0958454710182364,0,1.10115880999389,3.44755812830007,2.30409799884365,0.263772575460388,0.0914876436024097,0,2.79182999001381,0,2.59757021220577,1.17851434189467,0.996601765593721,0.372798891650601,0.075726193333184,0.0755715601067855,0,0,1.3599426674155,0,0,0,0,0,0.259786004602869,0,0,1.28326477414318,0,0,0,0,0,0.34255163915718,0,1.63286352971307,0.346970653532272,0.608930956624282,0.461230994512117,0.904335843315735,1.52865319276416,1.88499886994513,0,0.722996784599558,0.884610551949874,0.485300549842228,0.441683036920787,0.969750506270444,0,2.34224637609238,9.63454851341893,0.766371165625774,0,0,0,1.64769703345305,4.57500602818627,0.502617408451458,6.60532416730651,10.7400492078739,1.24672826735736,2.59586020908412,0.712875546952214,0.373220911830279,0,0,0,0,0,0,0.204109497453984,0.2562274405697,0.187403449119458,0.517406741478031,0,0,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0,0,0.536546802799238,0.583826711835847,0.329119699826961,0.164167464079095,1.13496333364198,1.16959989940266,0.439100230582101,0.805238512562231,7.36014819974445,0.92614151141356,0.330418782983798,0,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.380451252225118,0.474529061544512,0.164698954724011,0.251335208800269,0.596869416123452,0.38992817423824,0.898819408654221,0.432276099749388,0,0,0.228497025219458,0,0,0.193952487167626,0.280543279561274,0,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0.224862112384854,0,0,0.25462585178142,0,0.162135226775035,0,1.43768206527355,0,0,0,0.179397413521912,0,0.554259570499814,0,0,0,0.234690248288502,0.167506257441816,0,0.585400943573396,0.630540576424764,0.664394068946325,0.637819074629948,1.3109065177259,2.07221978239075,1.15719246865209,0,0,0.491764273019036,0,3.21101179975584,2.69586879162067,0,0,0,0,0,0.477937595905104,0,0,0,0,0.395287777946524,4.17717711348349,0.283880170416537,0.712262414669021,0.162886959353576,0.164970122972535,0,0,0,0.377210159511796,0,0.307435147943927,0.258428293168221,0.727067458955011,0,0.948110273807448,1.05418608574999,1.03135543248187,0,0,0,0,0,0.356737635204141,0,0.304464949114599,0.23467170806371,0,1.10264199027481,0.98931751764888,0.645857706783622,0.361877549568935,1.19372344003136,0.492422699235184,0.291480836629851,5.00648315428376,0,0,0,0,0.136694227721025,0,0,0.139951452323658,0,0,0,0,0.432021363287205,0.836353184057875,0.218362563746178,0.539457385539283,0.578574190077352,1.04702376793612,1.03691978633434,0,0,0.299033092087958,0.496375471371293,0.777804753376191,0.516639293910924,0.337912250981556,0.234714477291508,0.2604087696879,0.209718688851422,0.241584120826006,0.576060012515731,0,0.202725215290164,0,0,0.179026695667481,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0,0.549454872801795,0.428736758158132,0,7.34177395402186,7.82552902062201,4.01026859407578,6.18671456437275,8.22099023724771,5.2877572817279,6.75022500231806,5.40385443869065,6.34399372577886,8.80192529978094,0,0.399024873401031,0,0,0.209613162627982,0.183843508450014,0,0.412070114477788,0.962757628775446,0.505394423527595,0,0.377252682772152,0.0936415074698824,0.256100609619477,0.17230640686684,0,0.231768651889711,0.964546102318525,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0.548783918618318,0,0.543216455383447,0,0.118635018124174,0.394017929502254,0,0.154936841185966,0,0.999242311751784,0,0,0.382576664137687,0.661774257358546,0.695603506861264
|phase1_expression=0,0,0,0.90739263392049,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0.430761996159075,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0.881277725829041,0.101376931219515,0,0,0.218025156380447,2.63623419281366,0.777719596297134,0.139986421625363,0,0,0,0,0,0,0.515672092277442,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0.449949858640699,0,0,0.898800331555214,3.07374644257244,0.518448061542388,0.675029691658453,0.630974884054146,1.14260393761521,0.662605622854841,0,0.0958454710182364,0,1.10115880999389,3.44755812830007,2.30409799884365,0.263772575460388,0.0914876436024097,0,2.79182999001381,0,2.59757021220577,1.17851434189467,0.996601765593721,0.372798891650601,0.075726193333184,0.0755715601067855,0,0,1.3599426674155,0,0,0,0,0,0.259786004602869,0,0,1.28326477414318,0,0,0,0,0,0.34255163915718,0,1.63286352971307,0.346970653532272,0.608930956624282,0.461230994512117,0.904335843315735,1.52865319276416,1.88499886994513,0,0.722996784599558,0.884610551949874,0.485300549842228,0.441683036920787,0.969750506270444,0,2.34224637609238,9.63454851341893,0.766371165625774,0,0,0,1.64769703345305,4.57500602818627,0.502617408451458,6.60532416730651,10.7400492078739,1.24672826735736,2.59586020908412,0.712875546952214,0.373220911830279,0,0,0,0,0,0,0.204109497453984,0.2562274405697,0.187403449119458,0.517406741478031,0,0,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0,0,0.536546802799238,0.583826711835847,0.329119699826961,0.164167464079095,1.13496333364198,1.16959989940266,0.439100230582101,0.805238512562231,7.36014819974445,0.92614151141356,0.330418782983798,0,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.380451252225118,0.474529061544512,0.164698954724011,0.251335208800269,0.596869416123452,0.38992817423824,0.898819408654221,0.432276099749388,0,0,0.228497025219458,0,0,0.193952487167626,0.280543279561274,0,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0.224862112384854,0,0,0.25462585178142,0,0.162135226775035,0,1.43768206527355,0,0,0,0.179397413521912,0,0.554259570499814,0,0,0,0.234690248288502,0.167506257441816,0,0.585400943573396,0.630540576424764,0.664394068946325,0.637819074629948,1.3109065177259,2.07221978239075,1.15719246865209,0,0,0.491764273019036,0,3.21101179975584,2.69586879162067,0,0,0,0,0,0.477937595905104,0,0,0,0,0.395287777946524,4.17717711348349,0.283880170416537,0.712262414669021,0.162886959353576,0.164970122972535,0,0,0,0.377210159511796,0,0.307435147943927,0.258428293168221,0.727067458955011,0,0.948110273807448,1.05418608574999,1.03135543248187,0,0,0,0,0,0.356737635204141,0,0.304464949114599,0.23467170806371,0,1.10264199027481,0.98931751764888,0.645857706783622,0.361877549568935,1.19372344003136,0.492422699235184,0.291480836629851,5.00648315428376,0,0,0,0,0.136694227721025,0,0,0.139951452323658,0,0,0,0,0.432021363287205,0.836353184057875,0.218362563746178,0.539457385539283,0.578574190077352,1.04702376793612,1.03691978633434,0,0,0.299033092087958,0.496375471371293,0.777804753376191,0.516639293910924,0.337912250981556,0.234714477291508,0.2604087696879,0.209718688851422,0.241584120826006,0.576060012515731,0,0.202725215290164,0,0,0.179026695667481,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0,0.549454872801795,0.428736758158132,0,7.34177395402186,7.82552902062201,4.01026859407578,6.18671456437275,8.22099023724771,5.2877572817279,6.75022500231806,5.40385443869065,6.34399372577886,8.80192529978094,0,0.399024873401031,0,0,0.209613162627982,0.183843508450014,0,0.412070114477788,0.962757628775446,0.505394423527595,0,0.377252682772152,0.0936415074698824,0.256100609619477,0.17230640686684,0,0.231768651889711,0.964546102318525,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0.548783918618318,0,0.543216455383447,0,0.118635018124174,0.394017929502254,0,0.154936841185966,0,0.999242311751784,0,0,0.382576664137687,0.661774257358546,0.695603506861264
|short_description=p4@Iqsec2
|short_description=p4@Iqsec2
}}
}}

Latest revision as of 16:47, 1 October 2015

Short description:p4@Iqsec2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Iqsec2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -16bp_to_ENSMUST00000080074, ENSMUST00000168786, NM_001114664, uc009upy.1_5end
EntrezGene:Iqsec2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Iqsec2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I31.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I29.63
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.65
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D56.61
cortex, neonate N30.CNhs11107.1392-42F210.74
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G11.13
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E87.36
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.21
medulla oblongata, neonate N30.CNhs11200.1396-42A32.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C95.01
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.19
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.80
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.67e-2254
occipital lobe4.08e-2010
visual cortex4.08e-2010
neocortex4.08e-2010
neural tube7.17e-2052
neural rod7.17e-2052
future spinal cord7.17e-2052
neural keel7.17e-2052
brain2.99e-1947
future brain2.99e-1947
central nervous system8.37e-1973
nervous system4.40e-1875
regional part of brain6.40e-1846
regional part of cerebral cortex9.44e-1617
gray matter3.26e-1534
brain grey matter7.08e-1529
regional part of telencephalon7.08e-1529
telencephalon7.08e-1529
neurectoderm8.02e-1564
neural plate8.02e-1564
presumptive neural plate8.02e-1564
cerebral cortex1.85e-1421
cerebral hemisphere1.85e-1421
pallium1.85e-1421
anterior neural tube6.95e-1440
ectoderm-derived structure1.33e-1395
ectoderm1.33e-1395
presumptive ectoderm1.33e-1395
ecto-epithelium2.92e-1373
structure with developmental contribution from neural crest6.18e-1392
regional part of forebrain8.48e-1339
forebrain8.48e-1339
future forebrain8.48e-1339
tube1.45e-10114
pre-chordal neural plate2.11e-1049
anatomical conduit4.05e-10122
posterior neural tube7.39e-0712
chordal neural plate7.39e-0712
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