FFCP PHASE1:Mm9::chr1:84692551..84692569,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=227325 | |EntrezGene=227325 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=401 | |MCL_coexpression_id=401 | ||
|TSSclassifier=NA | |||
|UniProt=Q8JZM4 | |UniProt=Q8JZM4 | ||
|association_with_transcript=226bp_to_ENSMUST00000049126,NM_152915,uc007bsw.1,uc007bsx.1_5end | |association_with_transcript=226bp_to_ENSMUST00000049126,NM_152915,uc007bsw.1,uc007bsx.1_5end | ||
|cluster_id=chr1:84692551..84692569,- | |||
|description=CAGE_peak_2_at_Dner_5end | |description=CAGE_peak_2_at_Dner_5end | ||
|id=chr1:84692551..84692569,- | |id=chr1:84692551..84692569,- | ||
|ontology_enrichment_celltype=CL:0000221!4.02e-20!44;CL:0000133!4.02e-20!44;CL:0002319!4.26e-20!43;CL:0000117!5.32e-18!23;CL:0000337!5.32e-18!23;CL:0000540!1.44e-17!33;CL:0000047!1.44e-17!33;CL:0000031!1.44e-17!33;CL:0000404!1.44e-17!33;CL:0000055!7.82e-15!50;CL:0000393!1.04e-12!39;CL:0000211!1.04e-12!39;CL:0002321!9.48e-07!70;CL:0000220!9.48e-07!70 | |ontology_enrichment_celltype=CL:0000221!4.02e-20!44;CL:0000133!4.02e-20!44;CL:0002319!4.26e-20!43;CL:0000117!5.32e-18!23;CL:0000337!5.32e-18!23;CL:0000540!1.44e-17!33;CL:0000047!1.44e-17!33;CL:0000031!1.44e-17!33;CL:0000404!1.44e-17!33;CL:0000055!7.82e-15!50;CL:0000393!1.04e-12!39;CL:0000211!1.04e-12!39;CL:0002321!9.48e-07!70;CL:0000220!9.48e-07!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.06e-22,23;CL:0000337,2.06e-22,23;CL:0002319,7.33e-16,43;CL:0000540,8.45e-16,33;CL:0000047,8.45e-16,33;CL:0000031,8.45e-16,33;CL:0000404,8.45e-16,33;CL:0000221,3.05e-15,44;CL:0000133,3.05e-15,44;CL:0000393,6.59e-12,39;CL:0000211,6.59e-12,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.70e-36!75;UBERON:0001016!3.70e-36!75;UBERON:0001017!5.87e-36!73;UBERON:0005743!5.87e-36!73;UBERON:0004121!9.54e-34!102;UBERON:0000924!9.54e-34!102;UBERON:0006601!9.54e-34!102;UBERON:0002346!8.03e-29!71;UBERON:0003075!8.03e-29!71;UBERON:0007284!8.03e-29!71;UBERON:0000033!9.31e-28!63;UBERON:0001049!3.22e-27!52;UBERON:0005068!3.22e-27!52;UBERON:0006241!3.22e-27!52;UBERON:0007135!3.22e-27!52;UBERON:0000955!3.46e-25!50;UBERON:0006238!3.46e-25!50;UBERON:0002616!1.70e-24!49;UBERON:0003056!2.21e-21!49;UBERON:0002020!3.04e-20!34;UBERON:0003080!2.07e-18!40;UBERON:0002780!1.04e-17!39;UBERON:0001890!1.04e-17!39;UBERON:0006240!1.04e-17!39;UBERON:0002791!5.49e-16!29;UBERON:0003528!5.49e-16!29;UBERON:0001893!5.49e-16!29;UBERON:0007811!2.57e-14!86;UBERON:0000153!1.13e-11!94;UBERON:0000956!3.66e-10!21;UBERON:0001869!3.66e-10!21;UBERON:0000203!3.66e-10!21;UBERON:0003076!1.79e-09!12;UBERON:0003057!1.79e-09!12;UBERON:0002619!1.09e-08!17;UBERON:0002420!2.51e-07!8;UBERON:0007245!2.51e-07!8;UBERON:0010009!2.51e-07!8;UBERON:0010011!2.51e-07!8;UBERON:0000454!2.51e-07!8 | |ontology_enrichment_uberon=UBERON:0000073!3.70e-36!75;UBERON:0001016!3.70e-36!75;UBERON:0001017!5.87e-36!73;UBERON:0005743!5.87e-36!73;UBERON:0004121!9.54e-34!102;UBERON:0000924!9.54e-34!102;UBERON:0006601!9.54e-34!102;UBERON:0002346!8.03e-29!71;UBERON:0003075!8.03e-29!71;UBERON:0007284!8.03e-29!71;UBERON:0000033!9.31e-28!63;UBERON:0001049!3.22e-27!52;UBERON:0005068!3.22e-27!52;UBERON:0006241!3.22e-27!52;UBERON:0007135!3.22e-27!52;UBERON:0000955!3.46e-25!50;UBERON:0006238!3.46e-25!50;UBERON:0002616!1.70e-24!49;UBERON:0003056!2.21e-21!49;UBERON:0002020!3.04e-20!34;UBERON:0003080!2.07e-18!40;UBERON:0002780!1.04e-17!39;UBERON:0001890!1.04e-17!39;UBERON:0006240!1.04e-17!39;UBERON:0002791!5.49e-16!29;UBERON:0003528!5.49e-16!29;UBERON:0001893!5.49e-16!29;UBERON:0007811!2.57e-14!86;UBERON:0000153!1.13e-11!94;UBERON:0000956!3.66e-10!21;UBERON:0001869!3.66e-10!21;UBERON:0000203!3.66e-10!21;UBERON:0003076!1.79e-09!12;UBERON:0003057!1.79e-09!12;UBERON:0002619!1.09e-08!17;UBERON:0002420!2.51e-07!8;UBERON:0007245!2.51e-07!8;UBERON:0010009!2.51e-07!8;UBERON:0010011!2.51e-07!8;UBERON:0000454!2.51e-07!8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.46e-32,73;UBERON:0001016,1.88e-30,75;UBERON:0000073,4.52e-29,54;UBERON:0002346,2.57e-28,64;UBERON:0003075,2.57e-28,64;UBERON:0007284,2.57e-28,64;UBERON:0004121,4.55e-27,95;UBERON:0000924,4.55e-27,95;UBERON:0006601,4.55e-27,95;UBERON:0001049,6.09e-27,52;UBERON:0005068,6.09e-27,52;UBERON:0006241,6.09e-27,52;UBERON:0007135,6.09e-27,52;UBERON:0002020,6.74e-23,34;UBERON:0010371,1.44e-22,73;UBERON:0000955,8.41e-22,47;UBERON:0006238,8.41e-22,47;UBERON:0002616,5.31e-21,46;UBERON:0003056,8.15e-20,49;UBERON:0003528,1.24e-17,29;UBERON:0002791,1.24e-17,29;UBERON:0001893,1.24e-17,29;UBERON:0003080,1.95e-17,40;UBERON:0002780,1.30e-16,39;UBERON:0001890,1.30e-16,39;UBERON:0006240,1.30e-16,39;UBERON:0010314,2.55e-14,92;UBERON:0000956,1.69e-10,21;UBERON:0001869,1.69e-10,21;UBERON:0000203,1.69e-10,21;UBERON:0003076,2.18e-10,12;UBERON:0003057,2.18e-10,12;UBERON:0002420,7.08e-09,8;UBERON:0007245,7.08e-09,8;UBERON:0010009,7.08e-09,8;UBERON:0010011,7.08e-09,8;UBERON:0000454,7.08e-09,8;UBERON:0002619,1.24e-08,17;UBERON:0002240,2.18e-07,6;UBERON:0005174,2.18e-07,6;UBERON:0001137,2.18e-07,6;UBERON:0001948,9.00e-07,5;UBERON:0002315,9.00e-07,5 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,0.65407546914134,0.659058548203415,1.1665793944457,1.25987779462826,1.43752564364972,0,0,0,0,0,0,36.214646493868,47.609188134483,54.5095007015314,1.0165335962074,0.889294796111139,0,0,0,4.49400165777607,3.07374644257244,2.90330914463737,3.24014251996058,1.89292465216244,31.992910253226,39.7563373712904,8.45186514583183,5.55903731905771,16.5459381589804,17.6185409599022,6.12899222808901,7.21950706304344,26.7729164092293,18.5719916512892,17.7110545989298,9.49222196604695,6.19038871034848,7.79271063661732,56.8633169964179,45.9860528981103,52.1918448310842,0.37863096666592,0.377857800533928,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0.913396434936424,0,0.301445281105245,0.352766121407114,0,0,0.144599356919912,0,0,0,0,0,41.2820923786281,60.9489916827154,0,0,0,0,6.29120685500255,5.94750783664214,12.8167439155122,2.08589184230732,3.06858548796397,6.85700547046548,4.70499662896497,0,0,0,0.210441855886474,0.130120442962704,1.83921683546778,2.16074555766419,2.71268672104287,2.99360596265843,3.71529788826064,3.93547243150861,1.81092359517311,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,2.3131894342054,6.5858951922742,0,0,0,0,0.257734922644187,0.403367049246685,0,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,1.63171705145613,0,0,5.9403718295483,6.56385444916338,0,0,1.26203287766503,0.780877488593277,0.861693590931196,1.19484398976276,0.445597348164788,1.13230612315533,0,0.876767573733936,0.790575555893047,4.17717711348349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0.388076051348264,0.214337035031592,0.886701168211368,0.713475270408282,2.79733335023606,2.74018454203139,0,0,0.441056796109924,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,3.70850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0.134864346384821,0.247960367176008,0,0,0,0,0,0,0,0,0.168956125490778,0,0.39061315453185,0.524296722128554,0.241584120826006,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,1.9318959403219,0,0,0,0,3.3885110557024,1.84130094602871,4.01026859407578,2.749650917499,3.42541259885321,3.7769694869485,4.05013500139084,2.70192721934532,0.906284817968409,1.55328093525546,0.207574695168353,3.99024873401031,2.73173769206615,1.94485373654635,2.72497111416377,2.38996560985018,1.77797382241292,2.88449080134452,2.56735367673452,2.02157769411038,3.29523089857312,2.45214243801899,2.52832070168682,2.17685518176556,2.35485422718014,3.33405583898152,3.47652977834566,2.31491064556446,3.70877310722976,2.79677948255355,3.77156177623957,2.66213709239006,1.43061713968393,4.21504608233753,3.85848459702856,2.70766745253365,3.47563148458268,2.10455769150274,2.30866993537965,6.73370725989286,3.2031454893527,3.64466584789585,1.63692417267876,2.16911577660352,2.3148793317737,10.9916654292696,1.87145286756327,3.86767897286937,1.91288332068843,1.10295709559758,0.695603506861264 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|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,0.65407546914134,0.659058548203415,1.1665793944457,1.25987779462826,1.43752564364972,0,0,0,0,0,0,36.214646493868,47.609188134483,54.5095007015314,1.0165335962074,0.889294796111139,0,0,0,4.49400165777607,3.07374644257244,2.90330914463737,3.24014251996058,1.89292465216244,31.992910253226,39.7563373712904,8.45186514583183,5.55903731905771,16.5459381589804,17.6185409599022,6.12899222808901,7.21950706304344,26.7729164092293,18.5719916512892,17.7110545989298,9.49222196604695,6.19038871034848,7.79271063661732,56.8633169964179,45.9860528981103,52.1918448310842,0.37863096666592,0.377857800533928,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0.913396434936424,0,0.301445281105245,0.352766121407114,0,0,0.144599356919912,0,0,0,0,0,41.2820923786281,60.9489916827154,0,0,0,0,6.29120685500255,5.94750783664214,12.8167439155122,2.08589184230732,3.06858548796397,6.85700547046548,4.70499662896497,0,0,0,0.210441855886474,0.130120442962704,1.83921683546778,2.16074555766419,2.71268672104287,2.99360596265843,3.71529788826064,3.93547243150861,1.81092359517311,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,2.3131894342054,6.5858951922742,0,0,0,0,0.257734922644187,0.403367049246685,0,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,1.63171705145613,0,0,5.9403718295483,6.56385444916338,0,0,1.26203287766503,0.780877488593277,0.861693590931196,1.19484398976276,0.445597348164788,1.13230612315533,0,0.876767573733936,0.790575555893047,4.17717711348349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0.388076051348264,0.214337035031592,0.886701168211368,0.713475270408282,2.79733335023606,2.74018454203139,0,0,0.441056796109924,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,3.70850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0.134864346384821,0.247960367176008,0,0,0,0,0,0,0,0,0.168956125490778,0,0.39061315453185,0.524296722128554,0.241584120826006,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,1.9318959403219,0,0,0,0,3.3885110557024,1.84130094602871,4.01026859407578,2.749650917499,3.42541259885321,3.7769694869485,4.05013500139084,2.70192721934532,0.906284817968409,1.55328093525546,0.207574695168353,3.99024873401031,2.73173769206615,1.94485373654635,2.72497111416377,2.38996560985018,1.77797382241292,2.88449080134452,2.56735367673452,2.02157769411038,3.29523089857312,2.45214243801899,2.52832070168682,2.17685518176556,2.35485422718014,3.33405583898152,3.47652977834566,2.31491064556446,3.70877310722976,2.79677948255355,3.77156177623957,2.66213709239006,1.43061713968393,4.21504608233753,3.85848459702856,2.70766745253365,3.47563148458268,2.10455769150274,2.30866993537965,6.73370725989286,3.2031454893527,3.64466584789585,1.63692417267876,2.16911577660352,2.3148793317737,10.9916654292696,1.87145286756327,3.86767897286937,1.91288332068843,1.10295709559758,0.695603506861264 | ||
|short_description=p2@Dner | |short_description=p2@Dner | ||
}} | }} |
Latest revision as of 16:50, 1 October 2015
Short description: | p2@Dner |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dner_5end |
Coexpression cluster: | MCL_coexpression_mm9:401 |
Association with transcript: | 226bp_to_ENSMUST00000049126, NM_152915, uc007bsw.1, uc007bsx.1_5end |
EntrezGene: | Dner |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.06e-22 | 23 |
neuroblast (sensu Vertebrata) | 2.06e-22 | 23 |
neural cell | 7.33e-16 | 43 |
neuron | 8.45e-16 | 33 |
neuronal stem cell | 8.45e-16 | 33 |
neuroblast | 8.45e-16 | 33 |
electrically signaling cell | 8.45e-16 | 33 |
ectodermal cell | 3.05e-15 | 44 |
neurectodermal cell | 3.05e-15 | 44 |
electrically responsive cell | 6.59e-12 | 39 |
electrically active cell | 6.59e-12 | 39 |