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FFCP PHASE1:Mm9::chr13:51889019..51889082,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20354
|EntrezGene=20354
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=O09126,E9Q388
|UniProt=O09126,E9Q388
|association_with_transcript=0bp_to_ENSMUST00000110040,ENSMUST00000155896,ENSMUST00000163108_5end
|association_with_transcript=0bp_to_ENSMUST00000110040,ENSMUST00000155896,ENSMUST00000163108_5end
|cluster_id=chr13:51889019..51889082,-
|description=CAGE_peak_1_at_Sema4d_5end
|description=CAGE_peak_1_at_Sema4d_5end
|id=chr13:51889019..51889082,-
|id=chr13:51889019..51889082,-
|ontology_enrichment_celltype=CL:0002031!1.30e-10!25;CL:0000988!7.77e-10!32;CL:0002032!7.77e-10!32;CL:0000037!7.77e-10!32;CL:0000566!7.77e-10!32;CL:0000837!7.77e-10!32;CL:0000838!7.54e-09!12;CL:0000084!2.59e-08!11;CL:0000827!2.59e-08!11;CL:0000542!9.57e-08!13;CL:0000051!9.57e-08!13;CL:0000738!2.59e-07!17;CL:0002087!2.59e-07!17;CL:0000791!3.81e-07!9;CL:0000789!3.81e-07!9;CL:0002420!3.81e-07!9;CL:0002419!3.81e-07!9;CL:0000790!3.81e-07!9
|ontology_enrichment_celltype=CL:0002031!1.30e-10!25;CL:0000988!7.77e-10!32;CL:0002032!7.77e-10!32;CL:0000037!7.77e-10!32;CL:0000566!7.77e-10!32;CL:0000837!7.77e-10!32;CL:0000838!7.54e-09!12;CL:0000084!2.59e-08!11;CL:0000827!2.59e-08!11;CL:0000542!9.57e-08!13;CL:0000051!9.57e-08!13;CL:0000738!2.59e-07!17;CL:0002087!2.59e-07!17;CL:0000791!3.81e-07!9;CL:0000789!3.81e-07!9;CL:0002420!3.81e-07!9;CL:0002419!3.81e-07!9;CL:0000790!3.81e-07!9
|ontology_enrichment_celltype_v019_2=CL:0002031,1.30e-10,25;CL:0000988,7.75e-10,32;CL:0002032,7.75e-10,32;CL:0000037,7.75e-10,32;CL:0000837,7.75e-10,32;CL:0000838,7.53e-09,12;CL:0000084,2.59e-08,11;CL:0000827,2.59e-08,11;CL:0000542,9.56e-08,13;CL:0000051,9.56e-08,13;CL:0000738,2.59e-07,17;CL:0002087,2.59e-07,17;CL:0000791,3.81e-07,9;CL:0000789,3.81e-07,9;CL:0002420,3.81e-07,9;CL:0002419,3.81e-07,9;CL:0000790,3.81e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!1.56e-15!86;UBERON:0000153!1.12e-12!94;UBERON:0002193!2.73e-10!48;UBERON:0002390!8.49e-10!45;UBERON:0003061!8.49e-10!45;UBERON:0004177!1.65e-08!29;UBERON:0006562!1.83e-08!24;UBERON:0001557!1.83e-08!24;UBERON:0001042!1.83e-08!24;UBERON:0008814!1.83e-08!24;UBERON:0009145!1.83e-08!24;UBERON:0003408!2.29e-08!24;UBERON:0002370!2.91e-08!23;UBERON:0000974!2.91e-08!23;UBERON:0004807!2.91e-08!23;UBERON:0005058!2.91e-08!23;UBERON:0003351!2.91e-08!23;UBERON:0009113!2.91e-08!23;UBERON:0003295!2.91e-08!23;UBERON:0009722!2.91e-08!23;UBERON:0005562!2.91e-08!23;UBERON:0007690!2.91e-08!23;UBERON:0000033!3.16e-08!63;UBERON:0000072!9.38e-08!27;UBERON:0000063!1.31e-07!35;UBERON:0001017!2.18e-07!73;UBERON:0005743!2.18e-07!73
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.48e-10,48;UBERON:0002405,2.48e-10,48;UBERON:0002390,7.73e-10,45;UBERON:0003061,7.73e-10,45;UBERON:0007811,9.25e-10,36;UBERON:0004121,8.96e-09,95;UBERON:0000924,8.96e-09,95;UBERON:0006601,8.96e-09,95;UBERON:0004177,1.49e-08,29;UBERON:0005057,1.49e-08,29;UBERON:0006562,1.64e-08,24;UBERON:0001557,1.64e-08,24;UBERON:0001042,1.64e-08,24;UBERON:0008814,1.64e-08,24;UBERON:0009145,1.64e-08,24;UBERON:0010371,1.80e-08,73;UBERON:0003408,2.05e-08,24;UBERON:0002346,2.44e-08,64;UBERON:0003075,2.44e-08,64;UBERON:0007284,2.44e-08,64;UBERON:0002370,2.60e-08,23;UBERON:0000974,2.60e-08,23;UBERON:0004807,2.60e-08,23;UBERON:0005058,2.60e-08,23;UBERON:0003351,2.60e-08,23;UBERON:0009113,2.60e-08,23;UBERON:0003295,2.60e-08,23;UBERON:0009722,2.60e-08,23;UBERON:0005562,2.60e-08,23;UBERON:0007690,2.60e-08,23;UBERON:0000077,5.72e-08,35;UBERON:0000072,8.48e-08,27;UBERON:0001017,2.18e-07,73
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5,0,4.48549638131936,5.79104716599842,7.00024278038572,8.65370817300798,5.74450826668646,7.27614879603675,14.3224823328345,21.8107436405479,4.34851417486811,5.76060012515731,123.24433704499,34.2605613840378,35.1271473503709,56.2557163493852,76.2653723543471,77.6844097194746,84.737791911578,87.8752686688734,86.9321134053551,90.9147203394148,111.110456020798,122.11472456691,108.14211000373,124.707654627734,34.9164790767425,16.2049745963067,14.3542170575161,9.06576928366024,9.27310051354514,37.5364950902364,31.6852309982369,66.0254607563523,17.5550236412377,44.6153955667483,34.9847179745454,31.5092532391668,35.5736087451433,32.8839609489908,36.2589070747056,31.7260575108949,27.4695933966774,29.0011141749891,30.0300980816056,2.07574695168353,11.9707462020309,9.73181552798565,12.398442570483,7.33646069197938,7.72142735490059,16.6685045851211,16.4828045791115,16.0459604795908,15.1618327058278,14.9552786935241,15.2787336522722,12.735245015904,16.5184893204563,12.5209322323237,14.2888107384922,16.5714586101143,12.1532808892134,19.3680373377554,12.8063060516926,12.0004238334895,13.3106854619503,13.1139904471027,16.7148379127178,15.3398290076989,14.9767855968267,16.2805895856768,12.1012067261408,13.1729990430486,15.7119836064167,18.5070628273712,13.98763649733,13.0953933814301,14.2541893891089,13.5034627686799,22.982573170291,19.6502551094143,23.2060738372162,17.5985265503336,34.1916699635249,30.8384221375161
|phase1_expression=9.44878197918284,2.44282785347553,2.27499619694768,0.30246421130683,0.500895729946347,9.23335995515394,10.7461814673942,166.052593945867,181.054296687043,198.252653794728,71.3978927500356,61.1054737904277,134.392572995996,143.107198759899,40.3062811796952,35.4331717932195,18.88817070946,92.4304144499636,97.625476727286,86.5754889667982,23.9822078226017,126.993126585932,72.874741169763,20.6390225403495,19.7291981717766,6.31655160526522,6.03066794622705,9.69620547086501,5.70070258369122,11.089325709437,12.6386391073524,53.9776072440687,46.7449238564273,15.8481681015439,11.8429164098023,9.97407872150954,13.0668388007916,66.5465292871683,39.8481025707138,40.3113282859825,75.2936304679698,63.5232301011354,56.804711304645,0.251793635951155,0,0.367093504323363,3.12956537739216,6.75877984779384,6.59058548203415,5.44403717407994,2.2397827460058,11.5002051491977,76.5088683623278,155.227498390428,106.877828127304,1.02903774414379,2.0057340795713,0.515672092277442,16.1853168687678,14.8117474196169,17.1134478946668,0.677689064138264,0,17.5480444869873,13.8441290759376,22.7353636782752,28.4620104992484,32.2743376470106,24.3670588924922,24.1660629613726,25.4493203235172,45.9898084890124,35.3389665522582,11.7591167246356,12.555756703389,21.1420320920305,45.1475112097494,51.9687466006714,41.4737639791857,18.5959665699573,18.1145534332771,19.2737947106001,51.0904888172527,39.9561453122493,45.9922725808198,24.1595440088408,16.657486653495,20.3175395949578,2.49896437999507,3.55186332501892,10.4351215932604,1.72084775396277,0.679971333707751,1.07940638327563,0,0,27.6675507659551,0,0,0,20.1406090280653,0,0,0,16.4533191168523,16.4683912558814,16.6823066854878,14.7297204837587,82.3422469998006,11.5784868470563,5.72501578328248,6.69824052286711,7.37969591219387,6.93324146542064,8.11362079236363,6.03199638382442,5.6854842578906,5.35017620603673,50.4228014611428,41.2505467365893,40.6348393967124,50.4270263260631,13.0474232852686,77.0013496140369,65.7662659394249,18.3929079750186,55.9536631442648,26.3957201637099,30.2427140433894,45.3865637396613,40.7175536508578,17.2146462394624,34.9386883586476,39.8916113435316,43.2199132683885,61.4894387026801,6.72139801412087,36.8244633005875,11.8779696463827,35.1437899330412,14.1831282829347,24.8294272788151,32.7713076245736,37.6762044589288,73.0712000885261,51.1173743936551,42.6342846746766,40.0990224645474,7.54487975264948,7.75334928688059,7.38994721488585,6.35667624039967,7.78532297831674,13.2335823278423,12.3469281844766,6.17006227137329,20.3641824320838,13.3820911699652,20.4597719564827,13.4631752148076,17.3549284386011,16.7457717158744,19.4130683179872,17.5120166255189,14.8096428371883,16.2773761325285,13.9502168727802,15.4130251924664,19.4180622897907,22.326775114757,30.5629411987876,28.3627975605145,27.2242142960903,21.2046141641387,42.4785696099537,28.5045776290618,19.4947081960441,6.34681359992506,10.2378360256912,7.19933682767359,11.7269389803105,8.87407508342707,7.33847544688072,7.41879941838981,8.0669940462567,9.0584425098206,6.78605063760728,9.35095418593409,9.35827618171777,10.7858329038507,8.64552199498777,8.96135729644652,15.5527678781527,19.3079986310442,28.1769339182701,28.7148372261893,26.1835857676295,26.3009324588695,36.7404280691935,34.3931644792473,34.6967188529438,34.5512058981041,2.07516838961004,16.3508203601772,17.2971915699619,15.0657615297852,13.3887680116412,13.7470981058878,8.40265310878685,10.64475708568,11.0251954207024,7.13859674289012,44.5681440234799,9.30352369171258,6.86482880852033,1.51547326768267,2.33216637578486,1.4473305640901,26.6044593839911,6.82169082373745,10.9186534216157,13.2401166904647,11.4998221661366,11.3904255060435,12.3782693260727,10.5372169843211,14.9753386900881,7.52979944805835,10.3645599627367,18.3526912481627,18.131923095919,15.3328002096402,15.0791283939272,23.9318500880232,68.355233949646,53.2557920368134,64.5413371750924,92.3628090346561,0,71.4492723988376,25.2406575533005,20.3028147034252,37.0528244100414,16.9667846546312,26.5130422158049,35.9507194101817,28.3367491172426,32.4404002281556,33.204173347508,51.4114106274891,9.22610553853746,8.19101776869374,8.1443479676788,17.3218629121162,15.9294166007955,16.9946445308487,13.302236506449,9.05304382828311,10.6308681437078,14.1420168054207,14.9888410037568,16.7225515559653,13.5469003786194,18.6461687182131,17.9211634577498,14.4389760547462,33.703520969625,14.9450708045987,20.568030721458,21.4337035031592,19.6847659342924,25.328372099494,25.0114511315224,29.2286351150015,42.0062357434042,36.4351161885771,12.5701186891328,15.9939665353236,13.724476269152,16.1035509558176,22.5613730165928,23.4721486635438,9.91034844541493,90.4875473811287,53.6534565705257,9.90656966223468,16.8527019906438,29.9505846637459,37.1808299401188,42.0951838700002,47.2540035382918,54.5810664062266,56.3855893122049,10.5013767981662,10.1227517945963,10.1659733563424,12.8526355577944,12.3362094648537,10.0446779323242,11.0588764035553,13.5551667389551,12.0407733312654,10.7580427832188,29.2029477150855,0,4.48549638131936,5.79104716599842,7.00024278038572,8.65370817300798,5.74450826668646,7.27614879603675,14.3224823328345,21.8107436405479,4.34851417486811,5.76060012515731,123.24433704499,34.2605613840378,35.1271473503709,56.2557163493852,76.2653723543471,77.6844097194746,84.737791911578,87.8752686688734,86.9321134053551,90.9147203394148,111.110456020798,122.11472456691,108.14211000373,124.707654627734,34.9164790767425,16.2049745963067,14.3542170575161,9.06576928366024,9.27310051354514,37.5364950902364,31.6852309982369,66.0254607563523,17.5550236412377,44.6153955667483,34.9847179745454,31.5092532391668,35.5736087451433,32.8839609489908,36.2589070747056,31.7260575108949,27.4695933966774,29.0011141749891,30.0300980816056,2.07574695168353,11.9707462020309,9.73181552798565,12.398442570483,7.33646069197938,7.72142735490059,16.6685045851211,16.4828045791115,16.0459604795908,15.1618327058278,14.9552786935241,15.2787336522722,12.735245015904,16.5184893204563,12.5209322323237,14.2888107384922,16.5714586101143,12.1532808892134,19.3680373377554,12.8063060516926,12.0004238334895,13.3106854619503,13.1139904471027,16.7148379127178,15.3398290076989,14.9767855968267,16.2805895856768,12.1012067261408,13.1729990430486,15.7119836064167,18.5070628273712,13.98763649733,13.0953933814301,14.2541893891089,13.5034627686799,22.982573170291,19.6502551094143,23.2060738372162,17.5985265503336,34.1916699635249,30.8384221375161
|short_description=p1@Sema4d
|short_description=p1@Sema4d
}}
}}

Latest revision as of 17:29, 1 October 2015

Short description:p1@Sema4d
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sema4d_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000110040, ENSMUST00000155896, ENSMUST00000163108_5end
EntrezGene:Sema4d
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sema4d

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G79.45
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I79.23
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.75
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9166.05
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7181.05
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2198.25
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E671.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F161.11
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4134.39
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8143.11
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A140.31
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A335.43
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A518.89
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A292.43
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A497.63
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A686.58
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A323.98
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2126.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I972.87
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D120.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D219.73
GP2+ M cell, pool1.CNhs13228.11845-124H96.32
GP2+ M cell, pool2.CNhs13231.11846-124I16.03
GP2+ M cell, pool3.CNhs13240.11847-124I29.70
Ileum epithelium, pool1.CNhs13199.10252-104B95.70
Ileum epithelium, pool2.CNhs13232.10253-104C111.09
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C812.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I353.98
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G646.74
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F511.84
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F69.97
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F713.07
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G866.55
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H139.85
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H340.31
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G975.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H263.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H456.80
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.76
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.59
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.44
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A276.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9155.23
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1106.88
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C316.19
Mouse Granule cells, donor2.CNhs12357.11731-123E314.81
Mouse Granule cells, donor3.CNhs12108.11636-122C717.11
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C717.55
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E713.84
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D222.74
Mouse Microglia, donor1.CNhs12629.11718-123C828.46
Mouse Microglia, donor2.CNhs12634.11736-123E832.27
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D524.37
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F524.17
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D925.45
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F145.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D535.34
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.76
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.56
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D621.14
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D345.15
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F351.97
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D741.47
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D418.60
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F418.11
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D819.27
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E451.09
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E539.96
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I645.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D624.16
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.66
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E120.32
Mouse Schwann, donor1.CNhs12507.11728-123D92.50
Mouse Schwann, donor2.CNhs12573.11746-123F93.55
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.44
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A727.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G620.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G116.45
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G216.47
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G316.68
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B614.73
accessory axillary lymph node, adult.CNhs10475.1063-29H982.34
adrenal gland, adult.CNhs10508.49-24D711.58
adrenal gland, embryo E14.CNhs11038.406-44C55.73
adrenal gland, embryo E16.CNhs11004.1254-43D66.70
adrenal gland, embryo E17.CNhs11043.1263-45I17.38
adrenal gland, embryo E18.CNhs11026.1262-18F56.93
adrenal gland, neonate N00.CNhs11191.1311-23C18.11
adrenal gland, neonate N25.CNhs11223.1377-27I36.03
amnion, adult pregnant day17.5.CNhs10488.583-22A85.69
aorta, adult.CNhs10498.46-23H15.35
bone (os femoris), adult.CNhs10483.56-12G250.42
bone (os femoris), neonate N02.CNhs11227.1985-43F541.25
bone (os femoris), neonate N16.CNhs11225.1525-43A640.63
bone (os femoris), neonate N20.CNhs11195.1350-25C350.43
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B277.00
cerebellum, neonate N30.CNhs11135.1395-42I265.77
colon, adult.CNhs10468.36-18H718.39
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C755.95
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D126.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D430.24
corpora quadrigemina, adult.CNhs10501.16-22A445.39
corpus striatum, adult.CNhs10487.19-21D840.72
corpus striatum, neonate N00.CNhs11226.630-43F117.21
cortex, adult.CNhs10473.12-14D534.94
cortex, neonate N30.CNhs11107.1392-42F239.89
diencephalon, adult.CNhs10482.20-12F243.22
diencephalon, neonate N30.CNhs11201.1388-42B261.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.72
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A236.82
epididymis, adult.CNhs10490.58-23B211.88
eyeball, adult.CNhs10484.31-12G435.14
eyeball, embryo E12.CNhs11016.345-16C614.18
eyeball, embryo E14.CNhs10521.399-16E224.83
eyeball, embryo E15.CNhs10593.426-16C932.77
eyeball, embryo E17.CNhs11023.1261-18D437.68
eyeball, neonate N00.CNhs11207.633-15C673.07
eyeball, neonate N01.CNhs11140.1532-43E751.12
eyeball, neonate N02.CNhs11205.1551-44G842.63
eyeball, neonate N16.CNhs11188.777-19A240.10
forelimb, embryo E11.CNhs10596.335-25E27.54
forelimb, embryo E12.CNhs10600.359-14H27.75
forelimb, embryo E13.CNhs10589.384-1E27.39
forelimb, embryo E14.CNhs10577.413-26A86.36
forelimb, embryo E15.CNhs11007.437-20E77.79
forelimb, embryo E17.CNhs10598.1517-43C413.23
forelimb, embryo E18.CNhs11008.1520-43B512.35
gonad, embryo E13.CNhs11044.1564-45I66.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C820.36
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D213.38
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D520.46
heart, embryo E11.CNhs10586.331-24E913.46
heart, embryo E12.CNhs11015.353-12F517.35
heart, embryo E13.CNhs11013.376-3I916.75
heart, embryo E14.CNhs10597.403-26D419.41
heart, embryo E15.CNhs11017.431-16C817.51
heart, embryo E16.CNhs11021.457-17C614.81
heart, embryo E17.CNhs11025.479-18E516.28
heart, embryo E18.CNhs11030.1283-20G313.95
heart, neonate N00.CNhs11213.639-21E315.41
heart, neonate N03.CNhs11221.1349-25I219.42
heart, neonate N10.CNhs11118.749-24G122.33
heart, neonate N16.CNhs11209.782-15G130.56
heart, neonate N20.CNhs11127.821-26I628.36
heart, neonate N25.CNhs11196.1351-25D327.22
heart, neonate N30.CNhs11202.1390-42D221.20
hippocampus, adult.CNhs10478.13-16E842.48
hippocampus, neonate N00.CNhs11228.627-43G128.50
intestinal mucosa, adult.CNhs10506.860-29I319.49
intestine, adult.CNhs10496.178-9A36.35
intestine, embryo E12.CNhs11019.1251-16I510.24
intestine, embryo E13.CNhs11010.381-16D57.20
intestine, embryo E15.CNhs10602.976-16D811.73
intestine, embryo E16.CNhs10585.463-22H48.87
intestine, embryo E17.CNhs10582.482-18D37.34
intestine, embryo E18.CNhs10526.1289-20F77.42
intestine, neonate N00.CNhs11126.644-26D18.07
intestine, neonate N01.CNhs11192.1322-23E99.06
intestine, neonate N06.CNhs11102.688-20B86.79
intestine, neonate N07.CNhs11095.720-20F29.35
intestine, neonate N10.CNhs11098.755-23A59.36
intestine, neonate N20.CNhs11187.827-18D110.79
intestine, neonate N25.CNhs11121.1352-25E38.65
intestine, neonate N30.CNhs11131.1384-42G18.96
kidney, embryo E14.CNhs10606.411-4I915.55
kidney, embryo E15.CNhs10997.434-16F819.31
kidney, embryo E16.CNhs10584.464-22A528.18
kidney, embryo E17.CNhs11028.483-18I228.71
kidney, embryo E18.CNhs11001.1288-20C726.18
kidney, neonate N00.CNhs11214.646-21G726.30
kidney, neonate N10.CNhs11206.758-6D536.74
kidney, neonate N20.CNhs11113.832-19I134.39
kidney, neonate N25.CNhs11122.1353-25F334.70
kidney, neonate N30.CNhs11203.1385-42H134.55
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F816.35
liver, embryo E13.CNhs10524.378-3H617.30
liver, embryo E14.CNhs10594.409-16E115.07
liver, embryo E15.CNhs10520.433-16D713.39
liver, embryo E16.CNhs10523.462-17F513.75
liver, embryo E17.CNhs10510.481-18A38.40
liver, embryo E18.CNhs10579.499-43G410.64
liver, neonate N00.CNhs11117.641-24F411.03
liver, neonate N03.CNhs11123.1345-25G27.14
liver, neonate N06.CNhs11101.684-20A844.57
liver, neonate N07.CNhs11103.716-20H29.30
liver, neonate N10.CNhs11115.751-24B96.86
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B126.60
lung, embryo E12.CNhs10522.354-16G26.82
lung, embryo E14.CNhs10604.404-26F810.92
lung, embryo E15.CNhs11020.432-17C513.24
lung, embryo E16.CNhs10998.458-17B611.50
lung, embryo E17.CNhs10605.480-44A611.39
lung, embryo E18.CNhs10583.1287-20I612.38
lung, neonate N00.CNhs11224.640-42C610.54
lung, neonate N06.CNhs11212.683-20E514.98
lung, neonate N07.CNhs11111.715-19A37.53
lung, neonate N10.CNhs11219.750-23E610.36
lung, neonate N20.CNhs11109.822-18A418.35
lung, neonate N25.CNhs11119.1359-25C718.13
lung, neonate N30.CNhs11133.1394-42H215.33
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A115.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A123.93
mammary gland, adult lactating day02.CNhs10480.595-22B668.36
mammary gland, adult pregnant day19.CNhs10476.588-5H253.26
medulla oblongata, adult.CNhs10477.17-12C264.54
medulla oblongata, neonate N30.CNhs11200.1396-42A392.36
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C271.45
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E125.24
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E220.30
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E337.05
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D716.97
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D826.51
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D935.95
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D428.34
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D532.44
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D633.20
olfactory brain, adult.CNhs10489.18-22I951.41
ovary, adult.CNhs10507.91-2I79.23
ovary, embryo E18.CNhs11040.505-44H78.19
ovary, neonate N00.CNhs11217.1299-22I48.14
oviduct, adult pregnant day01.CNhs10500.988-6G617.32
pancreas, adult.CNhs10486.34-16E415.93
pancreas, embryo E14.CNhs11012.405-44F416.99
pancreas, embryo E15.CNhs11042.1556-45F213.30
pancreas, embryo E16.CNhs11003.460-26E59.05
pancreas, embryo E17.CNhs10599.1558-45G310.63
pancreas, embryo E18.CNhs10580.1535-43I714.14
pancreas, neonate N00.CNhs11105.645-26G914.99
pancreas, neonate N01.CNhs11138.1531-43D716.72
pancreas, neonate N02.CNhs11139.1539-43D813.55
pancreas, neonate N16.CNhs11136.787-43B618.65
pancreas, neonate N25.CNhs11094.1555-45E217.92
pancreas, neonate N30.CNhs11182.1548-44H514.44
pituitary gland, adult.CNhs10493.21-1G833.70
pituitary gland, embryo E12.CNhs11018.346-16E614.95
pituitary gland, embryo E13.CNhs11009.370-44C720.57
pituitary gland, embryo E14.CNhs11037.398-44A521.43
pituitary gland, embryo E15.CNhs10592.427-16B919.68
pituitary gland, embryo E16.CNhs11036.449-43F625.33
pituitary gland, embryo E17.CNhs11039.1265-44F525.01
pituitary gland, neonate N00.CNhs11190.1308-22E929.23
placenta, adult pregnant day10.CNhs10472.539-13I742.01
placenta, adult pregnant day17.CNhs10464.577-18G336.44
prostate, adult.CNhs10470.859-1F812.57
skin, adult.CNhs10492.30-1C315.99
skin, neonate N00.CNhs11124.650-25G413.72
skin, neonate N03.CNhs11215.662-22H316.10
skin, neonate N06.CNhs11097.693-20I522.56
skin, neonate N10.CNhs11108.762-6C423.47
small intestine, neonate N16.CNhs11114.790-21I19.91
spinal cord, adult.CNhs10505.24-13C990.49
spleen, adult.CNhs10465.25-2G253.65
spleen, embryo E16.CNhs11035.461-43C19.91
spleen, embryo E18.CNhs11011.1271-21F216.85
spleen, neonate N10.CNhs11116.752-24D129.95
spleen, neonate N20.CNhs11112.824-19H137.18
spleen, neonate N25.CNhs11099.1354-25G342.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C647.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C954.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D356.39
stomach, adult.CNhs10503.33-1H610.50
stomach, embryo E12.CNhs10588.356-43E310.12
stomach, embryo E15.CNhs10603.1252-16G810.17
stomach, embryo E16.CNhs11022.459-17D412.85
stomach, embryo E17.CNhs11006.1035-18D512.34
stomach, embryo E18.CNhs10999.1286-20C610.04
stomach, neonate N03.CNhs11193.1340-24B811.06
stomach, neonate N07.CNhs11210.718-18A913.56
stomach, neonate N25.CNhs11104.1355-25E412.04
stomach, neonate N30.CNhs11134.1386-42I110.76
submandibular gland, adult.CNhs10469.59-29C129.20
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F54.49
testis, embryo E15.CNhs11034.443-27C55.79
testis, embryo E16.CNhs11033.470-26G57.00
testis, embryo E17.CNhs11029.486-18I58.65
testis, embryo E18.CNhs11027.503-18G55.74
testis, neonate N00.CNhs11189.1300-22B77.28
testis, neonate N07.CNhs11222.726-26I414.32
testis, neonate N10.CNhs11204.763-44D921.81
testis, neonate N20.CNhs11110.839-18H34.35
testis, neonate N30.CNhs11130.1391-42E25.76
thymus, adult.CNhs10471.38-12B5123.24
thymus, embryo E14.CNhs11041.402-44I434.26
thymus, embryo E15.CNhs11005.430-45I235.13
thymus, embryo E16.CNhs11002.456-26C556.26
thymus, embryo E17.CNhs10581.478-18C176.27
thymus, embryo E18.CNhs10595.1273-19G477.68
thymus, neonate N02.CNhs11181.1541-43F884.74
thymus, neonate N03.CNhs11137.2104-43C787.88
thymus, neonate N06.CNhs11197.681-26C486.93
thymus, neonate N07.CNhs11211.713-19D390.91
thymus, neonate N10.CNhs11194.748-24E4111.11
thymus, neonate N20.CNhs11186.820-7A2122.11
thymus, neonate N25.CNhs11125.1362-25G7108.14
thymus, neonate N30.CNhs11132.1393-42G2124.71
tongue, adult.CNhs10499.32-1B434.92
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H316.20
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F714.35
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G59.07
urinary bladder, adult.CNhs10481.879-12E49.27
uterus, adult pregnant day19.CNhs10497.590-15F537.54
uterus, adult.CNhs10509.92-27E531.69
vagina, adult.CNhs10502.89-27D566.03
vesicular gland, adult.CNhs10491.51-27F817.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A144.62
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A234.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A331.51
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D735.57
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A432.88
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A536.26
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A631.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A727.47
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A829.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A930.03
whole body, embryo E11.CNhs11014.324-5I82.08
whole body, embryo E12.CNhs10587.857-27C911.97
whole body, embryo E13.CNhs10512.372-23H29.73
whole body, embryo E14.5.CNhs10578.420-27D212.40
whole body, embryo E14.CNhs10519.395-14B17.34
whole body, embryo E16.CNhs10514.453-14F27.72
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G516.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G516.05
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G515.16
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G514.96
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.28
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G512.74
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G516.52
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G514.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G516.57
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.15
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G519.37
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.81
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G513.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G513.11
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G516.71
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G515.34
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G514.98
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G516.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.71
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G518.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G514.25
whole body, embryo E17.5.CNhs10513.490-9F913.50
whole body, embryo E17.CNhs10517.475-3I522.98
whole body, embryo E18.CNhs10516.493-3B319.65
whole body, neonate N00.CNhs10525.657-19C223.21
whole body, neonate N01.CNhs10576.659-23C617.60
whole body, neonate N06.CNhs10515.692-21D134.19
whole body, neonate N10.CNhs10518.761-6B430.84





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system2.48e-1048
immune system2.48e-1048
hematopoietic system7.73e-1045
blood island7.73e-1045
craniocervical region9.25e-1036
ectoderm-derived structure8.96e-0995
ectoderm8.96e-0995
presumptive ectoderm8.96e-0995
hemopoietic organ1.49e-0829
immune organ1.49e-0829
pharynx1.64e-0824
upper respiratory tract1.64e-0824
chordate pharynx1.64e-0824
pharyngeal arch system1.64e-0824
pharyngeal region of foregut1.64e-0824
ecto-epithelium1.80e-0873
gland of gut2.05e-0824
neurectoderm2.44e-0864
neural plate2.44e-0864
presumptive neural plate2.44e-0864
thymus2.60e-0823
neck2.60e-0823
respiratory system epithelium2.60e-0823
hemolymphoid system gland2.60e-0823
pharyngeal epithelium2.60e-0823
thymic region2.60e-0823
pharyngeal gland2.60e-0823
entire pharyngeal arch endoderm2.60e-0823
thymus primordium2.60e-0823
early pharyngeal endoderm2.60e-0823
mixed endoderm/mesoderm-derived structure5.72e-0835
segment of respiratory tract8.48e-0827
central nervous system2.18e-0773
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