FFCP PHASE1:Mm9::chr13:52678028..52678046,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20963 | |EntrezGene=20963 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=48 | |MCL_coexpression_id=48 | ||
|TSSclassifier=NA | |||
|UniProt=P48025 | |UniProt=P48025 | ||
|association_with_transcript=-495bp_to_ENSMUST00000120135_5end | |association_with_transcript=-495bp_to_ENSMUST00000120135_5end | ||
|cluster_id=chr13:52678028..52678046,+ | |||
|description=CAGE_peak_8_at_Syk_5end | |description=CAGE_peak_8_at_Syk_5end | ||
|id=chr13:52678028..52678046,+ | |id=chr13:52678028..52678046,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.96e-14,6;CL:0000556,1.96e-14,6;CL:0000839,2.21e-10,13;CL:0000050,2.47e-09,9;CL:0002031,6.03e-09,25;CL:0000049,3.48e-08,19;CL:0000763,3.71e-08,16;CL:0000988,1.16e-07,32;CL:0002032,1.16e-07,32;CL:0000037,1.16e-07,32;CL:0000837,1.16e-07,32;CL:0002027,1.35e-07,3;CL:0002006,1.35e-07,3;CL:0002024,1.35e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.54e-07!70;UBERON:0001474!3.46e-07!22;UBERON:0004765!3.46e-07!22;UBERON:0001434!3.46e-07!22;UBERON:0002204!8.20e-07!32 | |ontology_enrichment_uberon=UBERON:0002405!2.54e-07!70;UBERON:0001474!3.46e-07!22;UBERON:0004765!3.46e-07!22;UBERON:0001434!3.46e-07!22;UBERON:0002204!8.20e-07!32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.94e-11,32;UBERON:0001474,5.92e-11,22;UBERON:0004765,5.92e-11,22;UBERON:0001434,5.92e-11,22;UBERON:0002371,3.71e-08,16;UBERON:0005418,7.01e-08,5;UBERON:0002472,7.01e-08,5;UBERON:0008784,7.01e-08,5;UBERON:0006058,7.01e-08,5;UBERON:0004709,7.01e-08,5;UBERON:0002529,7.01e-08,5;UBERON:0010538,7.01e-08,5;UBERON:0005420,7.01e-08,5;UBERON:0010758,7.01e-08,5;UBERON:0000978,7.01e-08,5;UBERON:0002103,7.01e-08,5;UBERON:0000376,7.01e-08,5;UBERON:0000154,7.01e-08,5;UBERON:0010709,7.01e-08,5;UBERON:0005730,7.01e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,5.66286595086627,5.06188168474565,2.79824751251259,18.612267756136,23.1723392793699,27.1609377150739,0.510259740906419,1.39007331681239,1.30599894569468,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,0.7813353445238,2.09409497589519,4.70585190424811,6.14740936462601,2.91306211818692,0,0.101376931219515,0,0,0.218025156380447,0,0,0,0,42.616781938665,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37863096666592,0.226714680320357,0,0,0,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0.505524445014783,1.02765491747154,5.43769555659061,0.148442139064825,0,0,0,0,0,0,0.247194967734374,1.15679485535929,8.84610551949874,0.647067399789637,11.0420759230197,14.5462575940567,0,0,0,0,1.07833612055328,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,14.3068016201607,0,0,0,0,0,0,0,0.12811372028485,0.187403449119458,0,0,0,0,0,0.278047249225598,0,0,0,0.702213187313235,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0.243206428637567,0.292399974850665,0.219550115291051,0.268412837520744,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0.198956472041151,0,0.898819408654221,0,0.199141273254367,0.189667900953082,0.228497025219458,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,1.50160595144485,0.786235980452812,0.899448449539415,0.811440485554012,2.17059443777175,1.2731292589071,2.01387296215567,3.24270453550071,1.37280706594041,0,1.11642284300551,1.24815069245824,0,0.179397413521912,0,1.84753190166605,0,0,0,0,0,0,0.195133647857799,0.472905432318573,0.221464689648775,0.159454768657487,1.3109065177259,0.518054945597687,0.578596234326046,3.01582567878545,1.08781136763742,0,1.10374698521893,0,0,0,1.51482556322624,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.35613120733451,0,0,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0.358117032009409,0.164140899745061,0.874442509889552,0,6.4930934703184,0.82554747185289,0.925972636848558,3.20226376907975,8.88512480186664,3.66045077130436,0.509935289981566,0.419854356970974,0.829199842826543,0,0.158167996790568,0,0,0.209088296014469,0,0,0.165306911450672,0,0,0.621339313086926,0,0,0.165458490457098,0.194451188344048,0,0.168956125490778,0.117357238645754,0,0,0,0,0.948033361884535,0.405450430580328,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0,0,0.15241361331,0,0.0974578807397524,0,0.233753804363138,0,0,0,0,0,0.375364950902364,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0,0,0,0.367687016900028,0,0,0,0,0.25347929989024,0,0.187283014939765,0.256100609619477,0.229741875822453,0,0.463537303779422,0,0.412085900803307,0.441596760403192,0,0,0.476872379894642,0.145346416632329,0.376437521661322,0.0846146078916765,0,0,0.407412341537585,0.561142271657738,0.237270036248348,0.197008964751127,0,0,0,0,0.701794825336225,0.859484216193193,0,0.882365676478062,2.31867835620421 | |phase1_expression=0,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,5.66286595086627,5.06188168474565,2.79824751251259,18.612267756136,23.1723392793699,27.1609377150739,0.510259740906419,1.39007331681239,1.30599894569468,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,0.7813353445238,2.09409497589519,4.70585190424811,6.14740936462601,2.91306211818692,0,0.101376931219515,0,0,0.218025156380447,0,0,0,0,42.616781938665,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37863096666592,0.226714680320357,0,0,0,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0.505524445014783,1.02765491747154,5.43769555659061,0.148442139064825,0,0,0,0,0,0,0.247194967734374,1.15679485535929,8.84610551949874,0.647067399789637,11.0420759230197,14.5462575940567,0,0,0,0,1.07833612055328,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,14.3068016201607,0,0,0,0,0,0,0,0.12811372028485,0.187403449119458,0,0,0,0,0,0.278047249225598,0,0,0,0.702213187313235,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0.243206428637567,0.292399974850665,0.219550115291051,0.268412837520744,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0.198956472041151,0,0.898819408654221,0,0.199141273254367,0.189667900953082,0.228497025219458,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,1.50160595144485,0.786235980452812,0.899448449539415,0.811440485554012,2.17059443777175,1.2731292589071,2.01387296215567,3.24270453550071,1.37280706594041,0,1.11642284300551,1.24815069245824,0,0.179397413521912,0,1.84753190166605,0,0,0,0,0,0,0.195133647857799,0.472905432318573,0.221464689648775,0.159454768657487,1.3109065177259,0.518054945597687,0.578596234326046,3.01582567878545,1.08781136763742,0,1.10374698521893,0,0,0,1.51482556322624,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.35613120733451,0,0,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0.358117032009409,0.164140899745061,0.874442509889552,0,6.4930934703184,0.82554747185289,0.925972636848558,3.20226376907975,8.88512480186664,3.66045077130436,0.509935289981566,0.419854356970974,0.829199842826543,0,0.158167996790568,0,0,0.209088296014469,0,0,0.165306911450672,0,0,0.621339313086926,0,0,0.165458490457098,0.194451188344048,0,0.168956125490778,0.117357238645754,0,0,0,0,0.948033361884535,0.405450430580328,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0,0,0.15241361331,0,0.0974578807397524,0,0.233753804363138,0,0,0,0,0,0.375364950902364,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0,0,0,0.367687016900028,0,0,0,0,0.25347929989024,0,0.187283014939765,0.256100609619477,0.229741875822453,0,0.463537303779422,0,0.412085900803307,0.441596760403192,0,0,0.476872379894642,0.145346416632329,0.376437521661322,0.0846146078916765,0,0,0.407412341537585,0.561142271657738,0.237270036248348,0.197008964751127,0,0,0,0,0.701794825336225,0.859484216193193,0,0.882365676478062,2.31867835620421 | ||
|short_description=p8@Syk | |short_description=p8@Syk | ||
}} | }} |
Latest revision as of 17:35, 1 October 2015
Short description: | p8@Syk |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Syk_5end |
Coexpression cluster: | MCL_coexpression_mm9:48 |
Association with transcript: | -495bp_to_ENSMUST00000120135_5end |
EntrezGene: | Syk |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.96e-14 | 6 |
megakaryocyte | 1.96e-14 | 6 |
myeloid lineage restricted progenitor cell | 2.21e-10 | 13 |
megakaryocyte-erythroid progenitor cell | 2.47e-09 | 9 |
hematopoietic lineage restricted progenitor cell | 6.03e-09 | 25 |
common myeloid progenitor | 3.48e-08 | 19 |
myeloid cell | 3.71e-08 | 16 |
hematopoietic cell | 1.16e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.16e-07 | 32 |
hematopoietic stem cell | 1.16e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.16e-07 | 32 |
CD9-positive, CD41-positive megakaryocyte cell | 1.35e-07 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.35e-07 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 3.94e-11 | 32 |
bone element | 5.92e-11 | 22 |
skeletal element | 5.92e-11 | 22 |
skeletal system | 5.92e-11 | 22 |
bone marrow | 3.71e-08 | 16 |
hindlimb bud | 7.01e-08 | 5 |
stylopod | 7.01e-08 | 5 |
lower limb segment | 7.01e-08 | 5 |
multi-limb segment region | 7.01e-08 | 5 |
pelvic appendage | 7.01e-08 | 5 |
limb segment | 7.01e-08 | 5 |
paired limb/fin segment | 7.01e-08 | 5 |
pelvic appendage bud | 7.01e-08 | 5 |
subdivision of organism along appendicular axis | 7.01e-08 | 5 |
leg | 7.01e-08 | 5 |
hindlimb | 7.01e-08 | 5 |
hindlimb stylopod | 7.01e-08 | 5 |
posterior region of body | 7.01e-08 | 5 |
pelvic complex | 7.01e-08 | 5 |
hindlimb/pelvic fin field | 7.01e-08 | 5 |