FFCP PHASE1:Mm9::chr6:73198571..73198582,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56451 | |EntrezGene=56451 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=G3UYP8 | |UniProt=G3UYP8 | ||
|association_with_transcript=-63bp_to_ENSMUST00000123159_5end | |association_with_transcript=-63bp_to_ENSMUST00000123159_5end | ||
|cluster_id=chr6:73198571..73198582,+ | |||
|description=CAGE_peak_3_at_Suclg1_5end | |description=CAGE_peak_3_at_Suclg1_5end | ||
|id=chr6:73198571..73198582,+ | |id=chr6:73198571..73198582,+ | ||
|ontology_enrichment_celltype=CL:0000473!5.68e-07!3;CL:0000627!5.68e-07!3;CL:0000682!5.68e-07!3 | |ontology_enrichment_celltype=CL:0000473!5.68e-07!3;CL:0000627!5.68e-07!3;CL:0000682!5.68e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,8.99e-19,3;CL:0000239,5.59e-16,6;CL:0000677,5.59e-16,6;CL:0000584,5.59e-16,6;CL:0000075,9.76e-14,7;CL:0000066,4.12e-11,25;CL:0002563,9.69e-11,9;CL:0002251,9.69e-11,9;CL:0000473,2.30e-08,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.44e-18,15;UBERON:0001962,2.15e-12,2;UBERON:0001961,2.15e-12,2;UBERON:0001744,2.15e-12,2;UBERON:0004923,2.11e-11,24;UBERON:0001242,2.40e-11,13;UBERON:0001262,2.40e-11,13;UBERON:0004786,2.40e-11,13;UBERON:0003350,9.69e-11,9;UBERON:0004808,9.69e-11,9;UBERON:0001277,9.69e-11,9;UBERON:0000485,7.96e-09,11;UBERON:0002465,1.45e-08,3;UBERON:0003199,3.67e-07,1 | |||
|phase1_expression=0,2.09385244583617,5.0049916332849,0,0,1.00727563147134,1.16806320297763,0.129123323441576,0,1.87251621057595,0,0,0,0.0874204024189974,0,0,0,0,0,0,13.0116233931137,0,0,1.11994695955385,1.83527424853736,4.59385571292016,2.58457197695445,1.72376986148711,0,0,1.99557459589774,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244981598429908,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0,0,1.96622188184453,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0,0.457500602818626,0.125654352112864,0,0.511430914660661,0,0.162241263067758,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0,0,0,0,0.163863314715738,0,0.289298117163023,0,0,0,0,0.160550589987792,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0.259229946583586,0,1.12738587736838,0,0,0,0,0,0,0,0,0.241584120826006,0.864090018773596,0.316011120628178,0,0,0.25984164595559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0.220591419119515,0 | |phase1_expression=0,2.09385244583617,5.0049916332849,0,0,1.00727563147134,1.16806320297763,0.129123323441576,0,1.87251621057595,0,0,0,0.0874204024189974,0,0,0,0,0,0,13.0116233931137,0,0,1.11994695955385,1.83527424853736,4.59385571292016,2.58457197695445,1.72376986148711,0,0,1.99557459589774,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244981598429908,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0,0,1.96622188184453,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0,0.457500602818626,0.125654352112864,0,0.511430914660661,0,0.162241263067758,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0,0,0,0,0.163863314715738,0,0.289298117163023,0,0,0,0,0.160550589987792,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0.259229946583586,0,1.12738587736838,0,0,0,0,0,0,0,0,0.241584120826006,0.864090018773596,0.316011120628178,0,0,0.25984164595559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0.220591419119515,0 | ||
|short_description=p3@Suclg1 | |short_description=p3@Suclg1 | ||
}} | }} |
Latest revision as of 17:53, 1 October 2015
Short description: | p3@Suclg1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Suclg1_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | -63bp_to_ENSMUST00000123159_5end |
EntrezGene: | Suclg1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 8.99e-19 | 3 |
brush border epithelial cell | 5.59e-16 | 6 |
gut absorptive cell | 5.59e-16 | 6 |
enterocyte | 5.59e-16 | 6 |
columnar/cuboidal epithelial cell | 9.76e-14 | 7 |
epithelial cell | 4.12e-11 | 25 |
intestinal epithelial cell | 9.69e-11 | 9 |
epithelial cell of alimentary canal | 9.69e-11 | 9 |
defensive cell | 2.30e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.44e-18 | 15 |
gut-associated lymphoid tissue | 2.15e-12 | 2 |
mucosa-associated lymphoid tissue | 2.15e-12 | 2 |
lymphoid tissue | 2.15e-12 | 2 |
organ component layer | 2.11e-11 | 24 |
intestinal mucosa | 2.40e-11 | 13 |
wall of intestine | 2.40e-11 | 13 |
gastrointestinal system mucosa | 2.40e-11 | 13 |
epithelium of mucosa | 9.69e-11 | 9 |
gastrointestinal system epithelium | 9.69e-11 | 9 |
intestinal epithelium | 9.69e-11 | 9 |
simple columnar epithelium | 7.96e-09 | 11 |
lymphoid system | 1.45e-08 | 3 |
egg chamber | 3.67e-07 | 1 |