FFCP PHASE1:Mm9::chrX:160347038..160347060,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=108012 | |EntrezGene=108012 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q3TIV9 | |UniProt=Q3TIV9 | ||
|association_with_transcript=-13bp_to_ENSMUST00000033734_5end | |association_with_transcript=-13bp_to_ENSMUST00000033734_5end | ||
|cluster_id=chrX:160347038..160347060,+ | |||
|description=CAGE_peak_2_at_Ap1s2_5end | |description=CAGE_peak_2_at_Ap1s2_5end | ||
|id=chrX:160347038..160347060,+ | |id=chrX:160347038..160347060,+ | ||
|ontology_enrichment_celltype=CL:0000117!5.39e-13!23;CL:0000337!5.39e-13!23;CL:0000393!3.11e-12!39;CL:0000211!3.11e-12!39;CL:0000540!7.02e-12!33;CL:0000047!7.02e-12!33;CL:0000031!7.02e-12!33;CL:0000404!7.02e-12!33;CL:0002319!4.37e-11!43;CL:0000055!8.59e-11!50;CL:0000221!1.76e-10!44;CL:0000133!1.76e-10!44 | |ontology_enrichment_celltype=CL:0000117!5.39e-13!23;CL:0000337!5.39e-13!23;CL:0000393!3.11e-12!39;CL:0000211!3.11e-12!39;CL:0000540!7.02e-12!33;CL:0000047!7.02e-12!33;CL:0000031!7.02e-12!33;CL:0000404!7.02e-12!33;CL:0002319!4.37e-11!43;CL:0000055!8.59e-11!50;CL:0000221!1.76e-10!44;CL:0000133!1.76e-10!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.72e-14,23;CL:0000337,7.72e-14,23;CL:0000393,5.75e-13,39;CL:0000211,5.75e-13,39;CL:0000540,1.39e-12,33;CL:0000047,1.39e-12,33;CL:0000031,1.39e-12,33;CL:0000404,1.39e-12,33;CL:0002319,2.02e-11,43;CL:0000221,9.56e-11,44;CL:0000133,9.56e-11,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.35e-25!75;UBERON:0001016!3.35e-25!75;UBERON:0001017!1.99e-24!73;UBERON:0005743!1.99e-24!73;UBERON:0001049!3.21e-22!52;UBERON:0005068!3.21e-22!52;UBERON:0006241!3.21e-22!52;UBERON:0007135!3.21e-22!52;UBERON:0000955!2.84e-21!50;UBERON:0006238!2.84e-21!50;UBERON:0002616!1.11e-20!49;UBERON:0002346!7.81e-20!71;UBERON:0003075!7.81e-20!71;UBERON:0007284!7.81e-20!71;UBERON:0000033!2.46e-19!63;UBERON:0004121!2.74e-18!102;UBERON:0000924!2.74e-18!102;UBERON:0006601!2.74e-18!102;UBERON:0003056!3.00e-17!49;UBERON:0003080!6.09e-17!40;UBERON:0002780!3.00e-16!39;UBERON:0001890!3.00e-16!39;UBERON:0006240!3.00e-16!39;UBERON:0002020!1.59e-15!34;UBERON:0002791!7.45e-13!29;UBERON:0003528!7.45e-13!29;UBERON:0001893!7.45e-13!29;UBERON:0000153!3.74e-10!94;UBERON:0007811!8.44e-09!86;UBERON:0000956!2.68e-08!21;UBERON:0001869!2.68e-08!21;UBERON:0000203!2.68e-08!21;UBERON:0000025!6.11e-08!114;UBERON:0002619!7.31e-07!17 | |ontology_enrichment_uberon=UBERON:0000073!3.35e-25!75;UBERON:0001016!3.35e-25!75;UBERON:0001017!1.99e-24!73;UBERON:0005743!1.99e-24!73;UBERON:0001049!3.21e-22!52;UBERON:0005068!3.21e-22!52;UBERON:0006241!3.21e-22!52;UBERON:0007135!3.21e-22!52;UBERON:0000955!2.84e-21!50;UBERON:0006238!2.84e-21!50;UBERON:0002616!1.11e-20!49;UBERON:0002346!7.81e-20!71;UBERON:0003075!7.81e-20!71;UBERON:0007284!7.81e-20!71;UBERON:0000033!2.46e-19!63;UBERON:0004121!2.74e-18!102;UBERON:0000924!2.74e-18!102;UBERON:0006601!2.74e-18!102;UBERON:0003056!3.00e-17!49;UBERON:0003080!6.09e-17!40;UBERON:0002780!3.00e-16!39;UBERON:0001890!3.00e-16!39;UBERON:0006240!3.00e-16!39;UBERON:0002020!1.59e-15!34;UBERON:0002791!7.45e-13!29;UBERON:0003528!7.45e-13!29;UBERON:0001893!7.45e-13!29;UBERON:0000153!3.74e-10!94;UBERON:0007811!8.44e-09!86;UBERON:0000956!2.68e-08!21;UBERON:0001869!2.68e-08!21;UBERON:0000203!2.68e-08!21;UBERON:0000025!6.11e-08!114;UBERON:0002619!7.31e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.72e-26,75;UBERON:0001017,1.15e-25,73;UBERON:0000073,5.30e-25,54;UBERON:0002346,1.87e-24,64;UBERON:0003075,1.87e-24,64;UBERON:0007284,1.87e-24,64;UBERON:0001049,1.58e-23,52;UBERON:0005068,1.58e-23,52;UBERON:0006241,1.58e-23,52;UBERON:0007135,1.58e-23,52;UBERON:0004121,8.99e-21,95;UBERON:0000924,8.99e-21,95;UBERON:0006601,8.99e-21,95;UBERON:0000955,2.71e-20,47;UBERON:0006238,2.71e-20,47;UBERON:0002616,1.12e-19,46;UBERON:0010371,1.70e-18,73;UBERON:0003056,3.85e-18,49;UBERON:0003080,4.44e-18,40;UBERON:0010314,1.05e-17,92;UBERON:0002780,2.46e-17,39;UBERON:0001890,2.46e-17,39;UBERON:0006240,2.46e-17,39;UBERON:0002020,1.48e-16,34;UBERON:0003528,1.09e-13,29;UBERON:0002791,1.09e-13,29;UBERON:0001893,1.09e-13,29;UBERON:0000025,4.98e-09,114;UBERON:0000956,8.50e-09,21;UBERON:0001869,8.50e-09,21;UBERON:0000203,8.50e-09,21;UBERON:0002619,2.95e-07,17;UBERON:0004111,4.28e-07,122 | |||
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| ||
|short_description=p2@Ap1s2 | |short_description=p2@Ap1s2 | ||
}} | }} |
Latest revision as of 18:02, 1 October 2015
Short description: | p2@Ap1s2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ap1s2_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENSMUST00000033734_5end |
EntrezGene: | Ap1s2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.72e-14 | 23 |
neuroblast (sensu Vertebrata) | 7.72e-14 | 23 |
electrically responsive cell | 5.75e-13 | 39 |
electrically active cell | 5.75e-13 | 39 |
neuron | 1.39e-12 | 33 |
neuronal stem cell | 1.39e-12 | 33 |
neuroblast | 1.39e-12 | 33 |
electrically signaling cell | 1.39e-12 | 33 |
neural cell | 2.02e-11 | 43 |
ectodermal cell | 9.56e-11 | 44 |
neurectodermal cell | 9.56e-11 | 44 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.72e-26 | 75 |
central nervous system | 1.15e-25 | 73 |
regional part of nervous system | 5.30e-25 | 54 |
neurectoderm | 1.87e-24 | 64 |
neural plate | 1.87e-24 | 64 |
presumptive neural plate | 1.87e-24 | 64 |
neural tube | 1.58e-23 | 52 |
neural rod | 1.58e-23 | 52 |
future spinal cord | 1.58e-23 | 52 |
neural keel | 1.58e-23 | 52 |
ectoderm-derived structure | 8.99e-21 | 95 |
ectoderm | 8.99e-21 | 95 |
presumptive ectoderm | 8.99e-21 | 95 |
brain | 2.71e-20 | 47 |
future brain | 2.71e-20 | 47 |
regional part of brain | 1.12e-19 | 46 |
ecto-epithelium | 1.70e-18 | 73 |
pre-chordal neural plate | 3.85e-18 | 49 |
anterior neural tube | 4.44e-18 | 40 |
structure with developmental contribution from neural crest | 1.05e-17 | 92 |
regional part of forebrain | 2.46e-17 | 39 |
forebrain | 2.46e-17 | 39 |
future forebrain | 2.46e-17 | 39 |
gray matter | 1.48e-16 | 34 |
brain grey matter | 1.09e-13 | 29 |
regional part of telencephalon | 1.09e-13 | 29 |
telencephalon | 1.09e-13 | 29 |
tube | 4.98e-09 | 114 |
cerebral cortex | 8.50e-09 | 21 |
cerebral hemisphere | 8.50e-09 | 21 |
pallium | 8.50e-09 | 21 |
regional part of cerebral cortex | 2.95e-07 | 17 |
anatomical conduit | 4.28e-07 | 122 |