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FFCP PHASE1:Mm9::chr1:92949999..92950097,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=16978
|EntrezGene=16978
|HGNC=
|HGNC=
|MCL_coexpression_id=2812
|TSSclassifier=NA
|UniProt=E9Q9T1,Q3UZ39,A6H5U5
|UniProt=E9Q9T1,Q3UZ39,A6H5U5
|association_with_transcript=0bp_to_ENSMUST00000068167,ENSMUST00000097649,ENSMUST00000097650,NM_001111311,NM_008515,uc007bzr.2,uc007bzs.2,uc007bzt.2,uc011wpe.1_5end
|association_with_transcript=0bp_to_ENSMUST00000068167,ENSMUST00000097649,ENSMUST00000097650,NM_001111311,NM_008515,uc007bzr.2,uc007bzs.2,uc007bzt.2,uc011wpe.1_5end
|cluster_id=chr1:92949999..92950097,+
|description=CAGE_peak_1_at_Lrrfip1_5end
|description=CAGE_peak_1_at_Lrrfip1_5end
|id=chr1:92949999..92950097,+
|id=chr1:92949999..92950097,+
|ontology_enrichment_celltype=CL:0000838!1.19e-07!12;CL:0000084!2.44e-07!11;CL:0000827!2.44e-07!11;CL:0000791!7.67e-07!9;CL:0000789!7.67e-07!9;CL:0002420!7.67e-07!9;CL:0002419!7.67e-07!9;CL:0000790!7.67e-07!9
|ontology_enrichment_celltype=CL:0000838!1.19e-07!12;CL:0000084!2.44e-07!11;CL:0000827!2.44e-07!11;CL:0000791!7.67e-07!9;CL:0000789!7.67e-07!9;CL:0002420!7.67e-07!9;CL:0002419!7.67e-07!9;CL:0000790!7.67e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000838,1.18e-07,12;CL:0000084,2.42e-07,11;CL:0000827,2.42e-07,11;CL:0000791,7.62e-07,9;CL:0000789,7.62e-07,9;CL:0002420,7.62e-07,9;CL:0002419,7.62e-07,9;CL:0000790,7.62e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!4.36e-13!130;UBERON:0000925!4.36e-13!130;UBERON:0006595!4.36e-13!130;UBERON:0001007!6.71e-13!128;UBERON:0001555!6.71e-13!128;UBERON:0007026!6.71e-13!128;UBERON:0004921!1.92e-12!126;UBERON:0004185!1.92e-12!126;UBERON:0001004!8.87e-09!42;UBERON:0000065!2.15e-08!41;UBERON:0000077!1.12e-07!97;UBERON:0003104!4.30e-07!131;UBERON:0009142!4.30e-07!131;UBERON:0001041!6.47e-07!92
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.52e-15,118;UBERON:0000925,2.52e-15,118;UBERON:0006595,2.52e-15,118;UBERON:0001007,3.80e-15,116;UBERON:0001555,3.80e-15,116;UBERON:0007026,3.80e-15,116;UBERON:0004921,1.15e-14,114;UBERON:0001041,8.24e-09,80;UBERON:0001004,8.79e-09,42;UBERON:0000065,2.13e-08,41
|phase1_expression=2.24208385946712,95.2702862855456,95.094841032413,78.9431591510826,92.1648143101279,22.1600638923695,19.1562365288331,104.460768664235,507.402554634607,540.689055803805,74.1373802416437,79.2935260413644,110.253270075696,124.574073447071,18.3210368998615,20.0450514715928,4.89693314689703,71.7676426189991,81.857316862626,55.1706547337439,15.0526623567394,55.6029326724958,51.9787580386481,45.5978404961209,38.3113499382174,74.0759233708376,39.6301036466349,49.3429122850686,37.624637052362,35.5362482961502,29.0466968958449,0,0,0,12.7094712690561,12.9663023379624,10.0042984568561,246.933662134776,185.957811996665,233.491589812314,271.174715982298,274.584284953295,263.632121695916,38.6503231185022,38.3204800009765,36.1587101758513,0,3.70642765846759,7.90870257844099,8.94377535741704,3.63964696225943,0,58.0527816959768,117.508667005838,121.665955289572,21.8670520630555,29.5129443136919,46.4104883049698,0.809265843438391,0.528990979272033,0,2.71075625655306,0.889294796111139,5.84934816232909,7.9109309005358,4.2628806896766,2.09720077362883,5.37905627450176,0.414758449233911,0.405017814995072,0,1.42825492201902,0.441737081903227,0.367472397644862,0.862609239164127,0,3.30347642998166,1.14918604276669,0.768032666281217,0.659431438650969,0.823388792421687,1.04182674111352,0,0.56276261003168,0.45839474333043,0.883885756421003,1.85083185038834,0.745597783301202,62.2469309198773,36.2743488512571,39.1317059747265,24.9522924324602,50.3178786943735,28.6042691568043,25.3412802804591,22.4013443548668,31.3191056893807,34.7677858059238,35.8504686351959,27.2071472372962,5.21120653173718,10.2661181931454,33.1246811618639,7.11066703153331,63.8648570983082,69.9273228711272,70.7734223020697,36.7672092695373,118.852488594052,12.7660239595749,8.67426633830679,9.74289530598852,13.1450833435953,13.565037649736,19.8724915059341,12.6923257242972,95.9116474809371,50.3205762081293,53.0766331169925,27.3385976411122,36.4388505459649,28.1227646818429,39.1422698558057,1.75668478206928,0.628340120440365,44.9604417167121,103.280637324103,66.5892031402683,90.8552123572413,2.09706895166752,1.83000241127451,1.50785222535437,1.04294592115366,1.79000820131231,1.45451631191692,1.1356888414743,7.84163101647435,26.3742777693397,3.28539585963777,30.9349528153117,1.82168620147785,4.82794419310293,2.88099407688559,11.3028613376786,21.4995337318196,22.0355598889942,19.6773621575431,21.4723797713383,2.37124792226126,6.24050064553804,4.39877810409872,7.45265490253754,13.3462679628287,19.8503734917635,20.9897779136102,6.96619933864726,60.3903341089382,64.3369767786788,64.5051143627995,17.8128164380532,20.1692411583743,21.0672611909387,26.7521551211288,34.6305047875431,34.0930319481106,36.9728972153149,43.4602910267383,55.4635376244055,28.4688540350321,21.9984401865988,18.6458261955468,14.6199987425332,14.7098577245004,15.2995317386824,1.05144974282064,2.05809224758569,118.950761874167,53.4190144660359,8.31824177087412,13.7019636397659,22.1652033474001,36.3030344322017,37.3595113659382,49.0782115370403,54.5708420776188,58.7975268364719,62.8338022000674,56.3046815876457,60.8287951811655,49.4350674759822,46.2535426731846,65.3183376274324,3.60369011810855,10.6251116727048,13.5249282807697,17.514014194697,22.1105835371093,27.9841921362371,34.2742031213474,35.1312152191453,25.11979645462,31.7130711279027,25.791378556582,11.5123122944105,11.0073037263394,9.44420872016386,14.2002084971952,14.9529839046498,23.680204215672,38.5512824184086,34.3726680763075,20.317544575918,37.3797336971122,29.3991348658118,25.2750515222794,30.0568864757063,28.524188749984,47.27946509361,77.4115866798074,4.73728529426212,10.7556884451737,14.2585872051158,24.8771663185812,46.2317270539411,59.2728665806174,76.1021226645415,47.6058135200697,44.7358673090525,52.6200736569707,64.8898726274323,78.7443517308484,73.1924236422449,52.7769493787453,34.8099637643974,13.277635371514,14.6246475541508,1.60550589987792,1.87538698547525,11.639381121744,32.5687496093641,86.7647603394706,87.458278722447,88.3235930704476,46.1209780048425,35.6477878531831,35.6676428793929,97.9641898053244,85.0464546521918,98.8219444866309,1.92792789853084,20.1554920995741,7.12262414669021,8.1443479676788,23.4257574621,23.8941249011933,5.58395463156457,8.46505959501303,9.6188590675508,7.08724542913855,17.8312385807478,36.6968176298874,14.9048829085777,15.6858846489277,20.2263525078922,25.3004660579997,20.6271086496374,1.70219802876894,3.96134406868882,3.62204314591713,5.5727629108214,3.90148514013002,5.88617098086833,5.92376474167636,3.34911444026059,34.027397669238,27.7500012831604,21.6117830093863,44.0246295353752,28.0948102450876,28.2264488663769,27.6943838087277,33.6488844477376,54.2154356131522,2.41052892613663,34.8576596827619,24.7664241555867,31.2978751254813,26.9366893516708,26.6553744055999,34.3167259809784,210.093339472405,171.440529096481,195.691162907064,53.4615546088464,5.852215881251,18.0954325742895,29.2694473627081,29.2723614420256,32.3176594344343,42.4822691112185,51.4931029168843,54.9687478166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|phase1_expression=2.24208385946712,95.2702862855456,95.094841032413,78.9431591510826,92.1648143101279,22.1600638923695,19.1562365288331,104.460768664235,507.402554634607,540.689055803805,74.1373802416437,79.2935260413644,110.253270075696,124.574073447071,18.3210368998615,20.0450514715928,4.89693314689703,71.7676426189991,81.857316862626,55.1706547337439,15.0526623567394,55.6029326724958,51.9787580386481,45.5978404961209,38.3113499382174,74.0759233708376,39.6301036466349,49.3429122850686,37.624637052362,35.5362482961502,29.0466968958449,0,0,0,12.7094712690561,12.9663023379624,10.0042984568561,246.933662134776,185.957811996665,233.491589812314,271.174715982298,274.584284953295,263.632121695916,38.6503231185022,38.3204800009765,36.1587101758513,0,3.70642765846759,7.90870257844099,8.94377535741704,3.63964696225943,0,58.0527816959768,117.508667005838,121.665955289572,21.8670520630555,29.5129443136919,46.4104883049698,0.809265843438391,0.528990979272033,0,2.71075625655306,0.889294796111139,5.84934816232909,7.9109309005358,4.2628806896766,2.09720077362883,5.37905627450176,0.414758449233911,0.405017814995072,0,1.42825492201902,0.441737081903227,0.367472397644862,0.862609239164127,0,3.30347642998166,1.14918604276669,0.768032666281217,0.659431438650969,0.823388792421687,1.04182674111352,0,0.56276261003168,0.45839474333043,0.883885756421003,1.85083185038834,0.745597783301202,62.2469309198773,36.2743488512571,39.1317059747265,24.9522924324602,50.3178786943735,28.6042691568043,25.3412802804591,22.4013443548668,31.3191056893807,34.7677858059238,35.8504686351959,27.2071472372962,5.21120653173718,10.2661181931454,33.1246811618639,7.11066703153331,63.8648570983082,69.9273228711272,70.7734223020697,36.7672092695373,118.852488594052,12.7660239595749,8.67426633830679,9.74289530598852,13.1450833435953,13.565037649736,19.8724915059341,12.6923257242972,95.9116474809371,50.3205762081293,53.0766331169925,27.3385976411122,36.4388505459649,28.1227646818429,39.1422698558057,1.75668478206928,0.628340120440365,44.9604417167121,103.280637324103,66.5892031402683,90.8552123572413,2.09706895166752,1.83000241127451,1.50785222535437,1.04294592115366,1.79000820131231,1.45451631191692,1.1356888414743,7.84163101647435,26.3742777693397,3.28539585963777,30.9349528153117,1.82168620147785,4.82794419310293,2.88099407688559,11.3028613376786,21.4995337318196,22.0355598889942,19.6773621575431,21.4723797713383,2.37124792226126,6.24050064553804,4.39877810409872,7.45265490253754,13.3462679628287,19.8503734917635,20.9897779136102,6.96619933864726,60.3903341089382,64.3369767786788,64.5051143627995,17.8128164380532,20.1692411583743,21.0672611909387,26.7521551211288,34.6305047875431,34.0930319481106,36.9728972153149,43.4602910267383,55.4635376244055,28.4688540350321,21.9984401865988,18.6458261955468,14.6199987425332,14.7098577245004,15.2995317386824,1.05144974282064,2.05809224758569,118.950761874167,53.4190144660359,8.31824177087412,13.7019636397659,22.1652033474001,36.3030344322017,37.3595113659382,49.0782115370403,54.5708420776188,58.7975268364719,62.8338022000674,56.3046815876457,60.8287951811655,49.4350674759822,46.2535426731846,65.3183376274324,3.60369011810855,10.6251116727048,13.5249282807697,17.514014194697,22.1105835371093,27.9841921362371,34.2742031213474,35.1312152191453,25.11979645462,31.7130711279027,25.791378556582,11.5123122944105,11.0073037263394,9.44420872016386,14.2002084971952,14.9529839046498,23.680204215672,38.5512824184086,34.3726680763075,20.317544575918,37.3797336971122,29.3991348658118,25.2750515222794,30.0568864757063,28.524188749984,47.27946509361,77.4115866798074,4.73728529426212,10.7556884451737,14.2585872051158,24.8771663185812,46.2317270539411,59.2728665806174,76.1021226645415,47.6058135200697,44.7358673090525,52.6200736569707,64.8898726274323,78.7443517308484,73.1924236422449,52.7769493787453,34.8099637643974,13.277635371514,14.6246475541508,1.60550589987792,1.87538698547525,11.639381121744,32.5687496093641,86.7647603394706,87.458278722447,88.3235930704476,46.1209780048425,35.6477878531831,35.6676428793929,97.9641898053244,85.0464546521918,98.8219444866309,1.92792789853084,20.1554920995741,7.12262414669021,8.1443479676788,23.4257574621,23.8941249011933,5.58395463156457,8.46505959501303,9.6188590675508,7.08724542913855,17.8312385807478,36.6968176298874,14.9048829085777,15.6858846489277,20.2263525078922,25.3004660579997,20.6271086496374,1.70219802876894,3.96134406868882,3.62204314591713,5.5727629108214,3.90148514013002,5.88617098086833,5.92376474167636,3.34911444026059,34.027397669238,27.7500012831604,21.6117830093863,44.0246295353752,28.0948102450876,28.2264488663769,27.6943838087277,33.6488844477376,54.2154356131522,2.41052892613663,34.8576596827619,24.7664241555867,31.2978751254813,26.9366893516708,26.6553744055999,34.3167259809784,210.093339472405,171.440529096481,195.691162907064,53.4615546088464,5.852215881251,18.0954325742895,29.2694473627081,29.2723614420256,32.3176594344343,42.4822691112185,51.4931029168843,54.9687478166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|short_description=p1@Lrrfip1
|short_description=p1@Lrrfip1
}}
}}

Latest revision as of 19:07, 1 October 2015

Short description:p1@Lrrfip1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lrrfip1_5end
Coexpression cluster:MCL_coexpression_mm9:2812
Association with transcript: 0bp_to_ENSMUST00000068167, ENSMUST00000097649, ENSMUST00000097650, NM_001111311, NM_008515, uc007bzr.2, uc007bzs.2, uc007bzt.2, uc011wpe.1_5end
EntrezGene:Lrrfip1
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p1@Lrrfip1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.24
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I595.27
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I695.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I378.94
CD326+ enterocyte, pool2.CNhs13197.11849-124I492.16
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I722.16
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I819.16
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9104.46
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7507.40
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2540.69
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E674.14
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F179.29
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4110.25
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8124.57
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A118.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A320.05
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A271.77
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A481.86
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A655.17
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.05
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H255.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I951.98
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D145.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D238.31
GP2+ M cell, pool1.CNhs13228.11845-124H974.08
GP2+ M cell, pool2.CNhs13231.11846-124I139.63
GP2+ M cell, pool3.CNhs13240.11847-124I249.34
Ileum epithelium, pool1.CNhs13199.10252-104B937.62
Ileum epithelium, pool2.CNhs13232.10253-104C135.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C829.05
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F512.71
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F612.97
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F710.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8246.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1185.96
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3233.49
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9271.17
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2274.58
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4263.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D838.65
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D938.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B336.16
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.71
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.91
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.64
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A258.05
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9117.51
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1121.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C121.87
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E129.51
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C546.41
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E85.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D962.25
Mouse Schwann, donor2.CNhs12573.11746-123F936.27
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G339.13
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F724.95
Mouse hepatocyte, donor1.CNhs13078.11714-123C450.32
Mouse hepatocyte, donor3.CNhs12615.11637-122C828.60
Mouse hepatocyte, donor6.CNhs13090.11822-124F425.34
Mouse hepatocyte, donor8.CNhs13091.11824-124F622.40
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A731.32
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I734.77
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E335.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I827.21
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.21
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I833.12
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G163.86
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G269.93
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G370.77
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B636.77
accessory axillary lymph node, adult.CNhs10475.1063-29H9118.85
adrenal gland, adult.CNhs10508.49-24D712.77
adrenal gland, embryo E14.CNhs11038.406-44C58.67
adrenal gland, embryo E16.CNhs11004.1254-43D69.74
adrenal gland, embryo E17.CNhs11043.1263-45I113.15
adrenal gland, embryo E18.CNhs11026.1262-18F513.57
adrenal gland, neonate N00.CNhs11191.1311-23C119.87
adrenal gland, neonate N25.CNhs11223.1377-27I312.69
amnion, adult pregnant day17.5.CNhs10488.583-22A895.91
aorta, adult.CNhs10498.46-23H150.32
bone (os femoris), adult.CNhs10483.56-12G253.08
bone (os femoris), neonate N02.CNhs11227.1985-43F527.34
bone (os femoris), neonate N16.CNhs11225.1525-43A636.44
bone (os femoris), neonate N20.CNhs11195.1350-25C328.12
cecum, adult.CNhs10467.37-13H439.14
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H744.96
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7103.28
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D166.59
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D490.86
corpora quadrigemina, adult.CNhs10501.16-22A42.10
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.84
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A226.37
epididymis, adult.CNhs10490.58-23B23.29
eyeball, adult.CNhs10484.31-12G430.93
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E24.83
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D411.30
eyeball, neonate N00.CNhs11207.633-15C621.50
eyeball, neonate N01.CNhs11140.1532-43E722.04
eyeball, neonate N02.CNhs11205.1551-44G819.68
eyeball, neonate N16.CNhs11188.777-19A221.47
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H26.24
forelimb, embryo E13.CNhs10589.384-1E24.40
forelimb, embryo E14.CNhs10577.413-26A87.45
forelimb, embryo E15.CNhs11007.437-20E713.35
forelimb, embryo E17.CNhs10598.1517-43C419.85
forelimb, embryo E18.CNhs11008.1520-43B520.99
gonad, embryo E13.CNhs11044.1564-45I66.97
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C860.39
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D264.34
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D564.51
heart, embryo E11.CNhs10586.331-24E917.81
heart, embryo E12.CNhs11015.353-12F520.17
heart, embryo E13.CNhs11013.376-3I921.07
heart, embryo E14.CNhs10597.403-26D426.75
heart, embryo E15.CNhs11017.431-16C834.63
heart, embryo E16.CNhs11021.457-17C634.09
heart, embryo E17.CNhs11025.479-18E536.97
heart, embryo E18.CNhs11030.1283-20G343.46
heart, neonate N00.CNhs11213.639-21E355.46
heart, neonate N03.CNhs11221.1349-25I228.47
heart, neonate N10.CNhs11118.749-24G122.00
heart, neonate N16.CNhs11209.782-15G118.65
heart, neonate N20.CNhs11127.821-26I614.62
heart, neonate N25.CNhs11196.1351-25D314.71
heart, neonate N30.CNhs11202.1390-42D215.30
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G12.06
intestinal mucosa, adult.CNhs10506.860-29I3118.95
intestine, adult.CNhs10496.178-9A353.42
intestine, embryo E12.CNhs11019.1251-16I58.32
intestine, embryo E13.CNhs11010.381-16D513.70
intestine, embryo E15.CNhs10602.976-16D822.17
intestine, embryo E16.CNhs10585.463-22H436.30
intestine, embryo E17.CNhs10582.482-18D337.36
intestine, embryo E18.CNhs10526.1289-20F749.08
intestine, neonate N00.CNhs11126.644-26D154.57
intestine, neonate N01.CNhs11192.1322-23E958.80
intestine, neonate N06.CNhs11102.688-20B862.83
intestine, neonate N07.CNhs11095.720-20F256.30
intestine, neonate N10.CNhs11098.755-23A560.83
intestine, neonate N20.CNhs11187.827-18D149.44
intestine, neonate N25.CNhs11121.1352-25E346.25
intestine, neonate N30.CNhs11131.1384-42G165.32
kidney, embryo E14.CNhs10606.411-4I93.60
kidney, embryo E15.CNhs10997.434-16F810.63
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I217.51
kidney, embryo E18.CNhs11001.1288-20C722.11
kidney, neonate N00.CNhs11214.646-21G727.98
kidney, neonate N10.CNhs11206.758-6D534.27
kidney, neonate N20.CNhs11113.832-19I135.13
kidney, neonate N25.CNhs11122.1353-25F325.12
kidney, neonate N30.CNhs11203.1385-42H131.71
liver, adult pregnant day01.CNhs10466.508-5B225.79
liver, embryo E12.CNhs10601.355-15F811.51
liver, embryo E13.CNhs10524.378-3H611.01
liver, embryo E14.CNhs10594.409-16E19.44
liver, embryo E15.CNhs10520.433-16D714.20
liver, embryo E16.CNhs10523.462-17F514.95
liver, embryo E17.CNhs10510.481-18A323.68
liver, embryo E18.CNhs10579.499-43G438.55
liver, neonate N00.CNhs11117.641-24F434.37
liver, neonate N03.CNhs11123.1345-25G220.32
liver, neonate N06.CNhs11101.684-20A837.38
liver, neonate N07.CNhs11103.716-20H229.40
liver, neonate N10.CNhs11115.751-24B925.28
liver, neonate N20.CNhs11220.823-25A330.06
liver, neonate N25.CNhs11198.1368-26H128.52
liver, neonate N30.CNhs11106.1382-42D147.28
lung, adult.CNhs10474.28-22B177.41
lung, embryo E12.CNhs10522.354-16G24.74
lung, embryo E14.CNhs10604.404-26F810.76
lung, embryo E15.CNhs11020.432-17C514.26
lung, embryo E16.CNhs10998.458-17B624.88
lung, embryo E17.CNhs10605.480-44A646.23
lung, embryo E18.CNhs10583.1287-20I659.27
lung, neonate N00.CNhs11224.640-42C676.10
lung, neonate N06.CNhs11212.683-20E547.61
lung, neonate N07.CNhs11111.715-19A344.74
lung, neonate N10.CNhs11219.750-23E652.62
lung, neonate N20.CNhs11109.822-18A464.89
lung, neonate N25.CNhs11119.1359-25C778.74
lung, neonate N30.CNhs11133.1394-42H273.19
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A152.78
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A134.81
mammary gland, adult lactating day02.CNhs10480.595-22B613.28
mammary gland, adult pregnant day19.CNhs10476.588-5H214.62
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C711.64
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C232.57
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E186.76
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E287.46
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E388.32
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D746.12
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D835.65
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D935.67
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D497.96
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D585.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D698.82
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I720.16
ovary, embryo E18.CNhs11040.505-44H77.12
ovary, neonate N00.CNhs11217.1299-22I48.14
oviduct, adult pregnant day01.CNhs10500.988-6G623.43
pancreas, adult.CNhs10486.34-16E423.89
pancreas, embryo E14.CNhs11012.405-44F45.58
pancreas, embryo E15.CNhs11042.1556-45F28.47
pancreas, embryo E16.CNhs11003.460-26E59.62
pancreas, embryo E17.CNhs10599.1558-45G37.09
pancreas, embryo E18.CNhs10580.1535-43I717.83
pancreas, neonate N00.CNhs11105.645-26G936.70
pancreas, neonate N01.CNhs11138.1531-43D714.90
pancreas, neonate N02.CNhs11139.1539-43D815.69
pancreas, neonate N16.CNhs11136.787-43B620.23
pancreas, neonate N25.CNhs11094.1555-45E225.30
pancreas, neonate N30.CNhs11182.1548-44H520.63
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E63.96
pituitary gland, embryo E13.CNhs11009.370-44C73.62
pituitary gland, embryo E14.CNhs11037.398-44A55.57
pituitary gland, embryo E15.CNhs10592.427-16B93.90
pituitary gland, embryo E16.CNhs11036.449-43F65.89
pituitary gland, embryo E17.CNhs11039.1265-44F55.92
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I734.03
placenta, adult pregnant day17.CNhs10464.577-18G327.75
prostate, adult.CNhs10470.859-1F821.61
skin, adult.CNhs10492.30-1C344.02
skin, neonate N00.CNhs11124.650-25G428.09
skin, neonate N03.CNhs11215.662-22H328.23
skin, neonate N06.CNhs11097.693-20I527.69
skin, neonate N10.CNhs11108.762-6C433.65
small intestine, neonate N16.CNhs11114.790-21I154.22
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G234.86
spleen, embryo E16.CNhs11035.461-43C124.77
spleen, embryo E18.CNhs11011.1271-21F231.30
spleen, neonate N10.CNhs11116.752-24D126.94
spleen, neonate N20.CNhs11112.824-19H126.66
spleen, neonate N25.CNhs11099.1354-25G334.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6210.09
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9171.44
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3195.69
stomach, adult.CNhs10503.33-1H653.46
stomach, embryo E12.CNhs10588.356-43E35.85
stomach, embryo E15.CNhs10603.1252-16G818.10
stomach, embryo E16.CNhs11022.459-17D429.27
stomach, embryo E17.CNhs11006.1035-18D529.27
stomach, embryo E18.CNhs10999.1286-20C632.32
stomach, neonate N03.CNhs11193.1340-24B842.48
stomach, neonate N07.CNhs11210.718-18A951.49
stomach, neonate N25.CNhs11104.1355-25E454.97
stomach, neonate N30.CNhs11134.1386-42I146.53
submandibular gland, adult.CNhs10469.59-29C166.48
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F58.67
testis, embryo E15.CNhs11034.443-27C58.93
testis, embryo E16.CNhs11033.470-26G56.03
testis, embryo E17.CNhs11029.486-18I54.52
testis, embryo E18.CNhs11027.503-18G56.76
testis, neonate N00.CNhs11189.1300-22B78.45
testis, neonate N07.CNhs11222.726-26I410.55
testis, neonate N10.CNhs11204.763-44D97.86
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B557.83
thymus, embryo E14.CNhs11041.402-44I419.87
thymus, embryo E15.CNhs11005.430-45I220.64
thymus, embryo E16.CNhs11002.456-26C532.61
thymus, embryo E17.CNhs10581.478-18C129.36
thymus, embryo E18.CNhs10595.1273-19G438.54
thymus, neonate N02.CNhs11181.1541-43F842.19
thymus, neonate N03.CNhs11137.2104-43C741.65
thymus, neonate N06.CNhs11197.681-26C449.88
thymus, neonate N07.CNhs11211.713-19D348.09
thymus, neonate N10.CNhs11194.748-24E449.20
thymus, neonate N20.CNhs11186.820-7A268.71
thymus, neonate N25.CNhs11125.1362-25G762.83
thymus, neonate N30.CNhs11132.1393-42G270.71
tongue, adult.CNhs10499.32-1B433.10
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H347.50
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F767.55
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G542.98
urinary bladder, adult.CNhs10481.879-12E482.49
uterus, adult pregnant day19.CNhs10497.590-15F564.00
uterus, adult.CNhs10509.92-27E536.26
vagina, adult.CNhs10502.89-27D592.61
vesicular gland, adult.CNhs10491.51-27F849.15
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I82.39
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H25.29
whole body, embryo E14.5.CNhs10578.420-27D215.32
whole body, embryo E14.CNhs10519.395-14B110.06
whole body, embryo E16.CNhs10514.453-14F213.42
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G524.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G525.55
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G519.58
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G526.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G521.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G523.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G521.63
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G521.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G520.96
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G523.34
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G525.26
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G525.85
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G523.49
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G522.96
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G522.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G522.72
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G520.74
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G523.98
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G522.96
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G525.13
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G524.15
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G518.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G522.82
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G523.01
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G523.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G527.29
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G517.19
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G521.23
whole body, embryo E17.5.CNhs10513.490-9F918.33
whole body, embryo E17.CNhs10517.475-3I59.74
whole body, embryo E18.CNhs10516.493-3B323.16
whole body, neonate N00.CNhs10525.657-19C224.93
whole body, neonate N01.CNhs10576.659-23C622.95
whole body, neonate N06.CNhs10515.692-21D123.16
whole body, neonate N10.CNhs10518.761-6B425.74





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphoid lineage restricted progenitor cell1.18e-0712
T cell2.42e-0711
pro-T cell2.42e-0711
mature alpha-beta T cell7.62e-079
alpha-beta T cell7.62e-079
immature T cell7.62e-079
mature T cell7.62e-079
immature alpha-beta T cell7.62e-079

Uber anatomy
Ontology termp-valuen
endoderm-derived structure2.52e-15118
endoderm2.52e-15118
presumptive endoderm2.52e-15118
digestive system3.80e-15116
digestive tract3.80e-15116
primitive gut3.80e-15116
subdivision of digestive tract1.15e-14114
foregut8.24e-0980
respiratory system8.79e-0942
respiratory tract2.13e-0841
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