FFCP PHASE1:Mm9::chrX:20281048..20281077,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=236733 | |EntrezGene=236733 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=483 | |MCL_coexpression_id=483 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000127294_5end | |association_with_transcript=0bp_to_ENSMUST00000127294_5end | ||
|cluster_id=chrX:20281048..20281077,+ | |||
|description=CAGE_peak_1_at_Usp11_5end | |description=CAGE_peak_1_at_Usp11_5end | ||
|id=chrX:20281048..20281077,+ | |id=chrX:20281048..20281077,+ | ||
|ontology_enrichment_celltype=CL:0000117!3.26e-14!23;CL:0000337!3.26e-14!23;CL:0000540!3.38e-14!33;CL:0000047!3.38e-14!33;CL:0000031!3.38e-14!33;CL:0000404!3.38e-14!33;CL:0000221!4.96e-12!44;CL:0000133!4.96e-12!44;CL:0002319!6.84e-12!43;CL:0000393!1.44e-09!39;CL:0000211!1.44e-09!39;CL:0000055!1.04e-07!50 | |ontology_enrichment_celltype=CL:0000117!3.26e-14!23;CL:0000337!3.26e-14!23;CL:0000540!3.38e-14!33;CL:0000047!3.38e-14!33;CL:0000031!3.38e-14!33;CL:0000404!3.38e-14!33;CL:0000221!4.96e-12!44;CL:0000133!4.96e-12!44;CL:0002319!6.84e-12!43;CL:0000393!1.44e-09!39;CL:0000211!1.44e-09!39;CL:0000055!1.04e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.23e-14,23;CL:0000337,3.23e-14,23;CL:0000540,3.36e-14,33;CL:0000047,3.36e-14,33;CL:0000031,3.36e-14,33;CL:0000404,3.36e-14,33;CL:0000221,4.93e-12,44;CL:0000133,4.93e-12,44;CL:0002319,6.80e-12,43;CL:0000393,1.41e-09,39;CL:0000211,1.41e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.89e-30!73;UBERON:0005743!1.89e-30!73;UBERON:0000073!1.24e-28!75;UBERON:0001016!1.24e-28!75;UBERON:0001049!3.45e-25!52;UBERON:0005068!3.45e-25!52;UBERON:0006241!3.45e-25!52;UBERON:0007135!3.45e-25!52;UBERON:0002346!4.41e-25!71;UBERON:0003075!4.41e-25!71;UBERON:0007284!4.41e-25!71;UBERON:0000955!2.06e-24!50;UBERON:0006238!2.06e-24!50;UBERON:0000033!5.35e-24!63;UBERON:0002616!1.15e-23!49;UBERON:0000153!1.36e-23!94;UBERON:0004121!2.97e-23!102;UBERON:0000924!2.97e-23!102;UBERON:0006601!2.97e-23!102;UBERON:0007811!1.23e-22!86;UBERON:0003056!2.28e-21!49;UBERON:0003080!1.82e-20!40;UBERON:0002780!9.83e-20!39;UBERON:0001890!9.83e-20!39;UBERON:0006240!9.83e-20!39;UBERON:0002020!1.25e-17!34;UBERON:0002791!1.14e-14!29;UBERON:0003528!1.14e-14!29;UBERON:0001893!1.14e-14!29;UBERON:0000956!9.56e-10!21;UBERON:0001869!9.56e-10!21;UBERON:0000203!9.56e-10!21;UBERON:0002619!3.84e-08!17 | |ontology_enrichment_uberon=UBERON:0001017!1.89e-30!73;UBERON:0005743!1.89e-30!73;UBERON:0000073!1.24e-28!75;UBERON:0001016!1.24e-28!75;UBERON:0001049!3.45e-25!52;UBERON:0005068!3.45e-25!52;UBERON:0006241!3.45e-25!52;UBERON:0007135!3.45e-25!52;UBERON:0002346!4.41e-25!71;UBERON:0003075!4.41e-25!71;UBERON:0007284!4.41e-25!71;UBERON:0000955!2.06e-24!50;UBERON:0006238!2.06e-24!50;UBERON:0000033!5.35e-24!63;UBERON:0002616!1.15e-23!49;UBERON:0000153!1.36e-23!94;UBERON:0004121!2.97e-23!102;UBERON:0000924!2.97e-23!102;UBERON:0006601!2.97e-23!102;UBERON:0007811!1.23e-22!86;UBERON:0003056!2.28e-21!49;UBERON:0003080!1.82e-20!40;UBERON:0002780!9.83e-20!39;UBERON:0001890!9.83e-20!39;UBERON:0006240!9.83e-20!39;UBERON:0002020!1.25e-17!34;UBERON:0002791!1.14e-14!29;UBERON:0003528!1.14e-14!29;UBERON:0001893!1.14e-14!29;UBERON:0000956!9.56e-10!21;UBERON:0001869!9.56e-10!21;UBERON:0000203!9.56e-10!21;UBERON:0002619!3.84e-08!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.85e-30,73;UBERON:0001016,1.22e-28,75;UBERON:0000073,6.52e-27,54;UBERON:0002346,7.82e-26,64;UBERON:0003075,7.82e-26,64;UBERON:0007284,7.82e-26,64;UBERON:0001049,3.40e-25,52;UBERON:0005068,3.40e-25,52;UBERON:0006241,3.40e-25,52;UBERON:0007135,3.40e-25,52;UBERON:0004121,2.80e-23,95;UBERON:0000924,2.80e-23,95;UBERON:0006601,2.80e-23,95;UBERON:0000955,3.32e-22,47;UBERON:0006238,3.32e-22,47;UBERON:0002616,1.78e-21,46;UBERON:0003056,2.26e-21,49;UBERON:0010371,4.48e-21,73;UBERON:0003080,1.80e-20,40;UBERON:0002780,9.72e-20,39;UBERON:0001890,9.72e-20,39;UBERON:0006240,9.72e-20,39;UBERON:0010314,8.95e-19,92;UBERON:0002020,1.24e-17,34;UBERON:0003528,1.13e-14,29;UBERON:0002791,1.13e-14,29;UBERON:0001893,1.13e-14,29;UBERON:0000956,9.51e-10,21;UBERON:0001869,9.51e-10,21;UBERON:0000203,9.51e-10,21;UBERON:0002619,3.83e-08,17 | |||
|phase1_expression=41.6387002472464,1.74487703819681,0.454999239389536,0.30246421130683,0,7.21880869221126,5.60670337429262,8.52213934714403,2.81577444303333,5.61754863172784,1.54096171402954,0.797721589953364,3.59521532855532,4.80812213304486,6.99530499812892,6.2767332890846,3.49780939064073,20.5050407482854,16.5908464662944,22.0682618934976,16.2432684188543,40.2128352363585,33.6947727989227,5.91971964335605,4.35877634027623,0,0.86152399231815,2.80112602491656,1.90023419456374,2.52030129759931,1.55211357458713,1.27006134691926,1.84519436275371,0,2.59966457776147,1.66234645358492,5.9209113316087,2.09265815368454,0.7813353445238,2.09409497589519,0.588231488031014,0.683045484958446,0.971020706062307,7.55380907853464,7.40051597902456,10.2786181210542,27.3836970521814,17.6600376668162,23.9457939180574,17.3042610176112,26.5974201088189,24.4379359420452,18.9594344845242,5.07753499407941,31.5928171193916,1.02903774414379,2.57880095944881,0.515672092277442,58.2671407275642,70.3558002431804,51.9741750875067,13.8926258148344,14.2287167377782,1.3498495759221,0.988866362566974,0.7104801149461,11.6844043102178,14.9845139075406,36.4987435325841,39.4217339928537,35.1242685456808,56.5588949119531,60.7388487616937,42.3818165283741,50.8939451106835,42.284064184061,88.092704799511,68.3127258755754,73.2703163632281,63.305418110493,72.5497013767109,57.8213841318004,69.7957497503452,103.548320245829,98.8604663115961,50.9707452869445,53.95886702286,60.2070210015721,1.51452386666368,8.16172849153284,11.0148505706638,0.860423876981386,0,0.539703191637817,0.649776417447669,0,4.21333260395256,6.30592193538814,5.19572009205738,3.18005617059306,24.6475984609191,12.8326477414318,45.8649431471962,49.7746692207332,1.73192832808971,2.78695852022608,4.04419556011827,3.65388415100992,17.0899003207133,20.1881309128162,30.1864468573076,23.1393763517227,17.7573932887165,18.2374395068673,17.8734834846271,15.8339905075391,7.91023896749996,3.03658649531814,5.30766331169925,15.0443170451091,8.17113618303456,8.727754556434,3.72783522436244,28.9852989041432,21.3635640949724,3.0654846625031,12.8202183221335,14.9975682748352,15.3754974758408,76.0936448176499,59.4750783664214,40.5863557324552,61.7076336682581,59.3259861006367,62.9597775015467,65.3832290163063,23.3212143217224,10.5745925018579,11.8779696463827,7.15502310014011,36.3036035865943,36.0946303960553,33.3114940139896,37.0733851875859,32.589483093486,30.1067242669397,31.6711829011883,13.9699820199068,21.3412313003514,33.8499883500397,39.7649540610524,26.5226836237366,23.6340161841758,20.89512999133,17.0799173218593,39.4087848300616,16.8531164955176,19.5584409407184,15.0606654679664,27.5477277472218,27.6740750777694,22.8678818055489,23.4377288229358,20.2667158699826,22.6772655944446,15.1147064087765,16.6329508867764,12.8441876603886,13.6584675428189,7.88003827579657,4.70199095365963,6.14039947186396,5.26920276698522,4.2946054003319,66.6619136948283,40.2357034403002,1.65209391491899,1.05780226665418,28.7939138222566,29.9585306699966,19.8455890436024,15.9329984452441,11.3412802360884,11.6037631928661,1.42358718463353,3.45867804920423,8.29406189040889,9.35095418593409,7.21367122340745,0.898819408654221,2.37751854862164,2.38969527905241,24.0878234210414,27.0768974885057,40.574784842309,22.1979947351393,22.4984885114446,14.5181147172959,16.947391949301,6.05201606716369,3.92496819603437,3.57851775373222,0.592905254174298,11.6791574001266,11.596980711679,7.87017393346988,7.30296436998611,6.27060615356284,7.12952384987975,6.61701116136864,5.18832725680113,3.29473695825698,7.18841032636773,5.95425516269605,2.18426371180192,1.26289438973556,1.4351793081753,1.92977408545347,6.28160846566456,28.8026945891137,27.5410810187024,21.8971160649993,23.9384053254272,20.1007508930179,17.139142143793,12.4885534628991,15.4482441224067,14.6166695168191,12.437471955284,6.22680595919804,8.80693407516067,7.23245292907558,1.50791283939272,2.71952841909355,1.96705709207614,3.31124095565679,54.5872005958493,46.8846746368813,10.3279015587306,1.76729649043061,22.085575359138,15.2271110275689,21.5423397732799,20.790285421872,29.1866263047936,35.9507194101817,21.8597778904443,25.7185154961954,27.6701444562566,72.6186175113284,20.0135520143659,36.8595799591218,22.9670612688542,14.1874305756381,7.96470830039777,22.5785991624133,17.8370898609203,9.24164890803901,11.8120757152309,10.1453598821496,8.26970538138308,8.72480950746013,5.70395805415554,2.52829406348653,0,2.06271086496374,51.406380468822,36.9125242764186,41.2654201266987,38.5806663056866,40.9655939713652,42.986885042099,42.6181963359493,47.4965320618775,6.33613611772018,4.44847348814022,2.64634077665954,4.61681508236144,8.88054346827481,7.96130609051657,5.13301079213487,3.44695889464629,3.49777003955821,44.6874977845328,7.51831875510552,20.8450736642855,12.4080333337707,7.34636982318295,6.56132293060921,8.69357058184786,22.9470880491705,23.7917468950219,21.835595861099,0.954670618015114,30.2100873869984,27.0414891278709,16.308806464092,11.9180328728247,12.2283035697859,7.55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| ||
|short_description=p1@Usp11 | |short_description=p1@Usp11 | ||
}} | }} |
Latest revision as of 19:29, 1 October 2015
Short description: | p1@Usp11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Usp11_5end |
Coexpression cluster: | MCL_coexpression_mm9:483 |
Association with transcript: | 0bp_to_ENSMUST00000127294_5end |
EntrezGene: | Usp11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.23e-14 | 23 |
neuroblast (sensu Vertebrata) | 3.23e-14 | 23 |
neuron | 3.36e-14 | 33 |
neuronal stem cell | 3.36e-14 | 33 |
neuroblast | 3.36e-14 | 33 |
electrically signaling cell | 3.36e-14 | 33 |
ectodermal cell | 4.93e-12 | 44 |
neurectodermal cell | 4.93e-12 | 44 |
neural cell | 6.80e-12 | 43 |
electrically responsive cell | 1.41e-09 | 39 |
electrically active cell | 1.41e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.85e-30 | 73 |
nervous system | 1.22e-28 | 75 |
regional part of nervous system | 6.52e-27 | 54 |
neurectoderm | 7.82e-26 | 64 |
neural plate | 7.82e-26 | 64 |
presumptive neural plate | 7.82e-26 | 64 |
neural tube | 3.40e-25 | 52 |
neural rod | 3.40e-25 | 52 |
future spinal cord | 3.40e-25 | 52 |
neural keel | 3.40e-25 | 52 |
ectoderm-derived structure | 2.80e-23 | 95 |
ectoderm | 2.80e-23 | 95 |
presumptive ectoderm | 2.80e-23 | 95 |
brain | 3.32e-22 | 47 |
future brain | 3.32e-22 | 47 |
regional part of brain | 1.78e-21 | 46 |
pre-chordal neural plate | 2.26e-21 | 49 |
ecto-epithelium | 4.48e-21 | 73 |
anterior neural tube | 1.80e-20 | 40 |
regional part of forebrain | 9.72e-20 | 39 |
forebrain | 9.72e-20 | 39 |
future forebrain | 9.72e-20 | 39 |
structure with developmental contribution from neural crest | 8.95e-19 | 92 |
gray matter | 1.24e-17 | 34 |
brain grey matter | 1.13e-14 | 29 |
regional part of telencephalon | 1.13e-14 | 29 |
telencephalon | 1.13e-14 | 29 |
cerebral cortex | 9.51e-10 | 21 |
cerebral hemisphere | 9.51e-10 | 21 |
pallium | 9.51e-10 | 21 |
regional part of cerebral cortex | 3.83e-08 | 17 |