Personal tools

FFCP PHASE1:Mm9::chr16:23609981..23610047,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=67775|HGNC=|MCL_coexpression_id=1264|UniProt=Q9ER80,Q923D9|association_with_transcript=0bp_to_ENSMUST00000038423,NM_023386,uc007ytw.2_5end|description=CAGE_peak_1_at_Rtp4_5end|id=chr16:23609981..23610047,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!6.58e-08!130;UBERON:0000925!6.58e-08!130;UBERON:0006595!6.58e-08!130;UBERON:0000926!2.24e-07!193;UBERON:0004120!2.24e-07!193;UBERON:0006603!2.24e-07!193;UBERON:0004921!3.05e-07!126;UBERON:0004185!3.05e-07!126;UBERON:0001007!3.09e-07!128;UBERON:0001555!3.09e-07!128;UBERON:0007026!3.09e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.69e-08,118;UBERON:0000925,4.69e-08,118;UBERON:0006595,4.69e-08,118;UBERON:0004921,2.19e-07,114;UBERON:0001007,2.28e-07,116;UBERON:0001555,2.28e-07,116;UBERON:0007026,2.28e-07,116|phase1_expression=3.52327463630547,11.5161884520989,10.0099832665698,25.7094579610806,29.5528480668345,9.9048770428015,8.87728034262997,44.6766699107854,3.51971805379167,2.57470978954193,1.88339765048055,1.43589886191606,79.2659379581483,47.6441193183536,38.6407323706169,55.2757479974225,13.9912375625629,40.6946193312127,23.5836825801871,16.9755860719212,25.9382034960763,16.0851340945434,17.5003858723087,10.5594999043648,6.65286915094793,7.46501553349526,15.0766698655676,9.9116767035509,22.0427166569394,16.6339885641554,10.4213340007993,0,0,0,8.37669697278696,5.15327400611326,5.3084032628216,77.8468833170648,63.2881629064278,68.5816104605676,48.2349820185432,43.7149110373405,41.2683800076481,13.2191658874356,12.8748702648783,2.75320128242522,135.353702572211,3.05235218932625,15.5977189741475,17.6931208157598,30.6570263359544,5.75010257459886,12.080347636157,23.9369506863744,29.9123481236793,21.0952737549477,14.0401385569991,44.8634720281375,0,0,0,6.77689064138264,57.8041617472241,92.6896708799841,94.9311708064295,95.9148155177235,22.1704081783619,8.06858441175265,0.414758449233911,0.405017814995072,0,0.571301968807607,1.54607978666129,0.122490799214954,0,0,4.40463523997555,2.80912143787413,1.68967186581868,0.263772575460388,0.457438218012048,0,1.67509799400829,2.25105044012672,2.75036845998258,0.294628585473668,3.27454865837937,0.186399445825301,56.4917402265553,51.5398039928277,107.829589797024,86.0423876981386,3.39985666853875,3.77792234146472,18.1937396885347,14.7848872742121,16.0106638950197,6.30592193538814,5.45550609666024,3.88673531961374,2.95771181531029,5.13305909657271,0,0,3.030874574157,0.760079596425296,3.53867111510348,30.7154636444271,76.6456135595628,25.383605780085,2.25530924795977,3.34912026143355,6.91846491768175,38.5849959814714,30.4554751481475,31.4166478324189,72.6753205139059,49.16378135277,38.9228642857945,8.08834249737046,7.06692859073259,7.27312879702833,11.1835056730873,3.51336956413857,1.8850203613211,29.377561348988,2.75574786363617,2.39961092397363,1.90605340609597,5.69204429738326,8.6925114535539,2.63874139437015,3.82413504423008,2.55715457330331,4.36354893575076,2.43361894601636,9.67473956578005,11.0722203842983,21.9868799837297,16.8353484709179,1.17108398666433,1.14951052216736,0.900310649026746,2.10986744970001,4.42237244483631,3.58718416797579,2.99845518591132,6.20888089773638,0.862271971731369,0.567318240503458,1.58356011747554,2.6303487891309,1.66828349535359,2.43776516565517,12.5527103208846,1.99034266818493,0,0.772043721344145,0.568326998791185,1.65700618028402,3.04883877975425,5.76198596675248,3.55117103377815,3.73852040320067,4.01094493507183,6.97601834251224,14.7550370769791,18.7992201211143,6.91151369636618,11.6558899496158,13.7816976227955,18.7135983904425,38.860370406516,25.633425983231,4.20579897128254,5.65975368086064,55.1799367582943,91.4998960655863,1.91959425481711,2.78684006232526,1.67527699718721,3.63030344322017,7.56085349072559,39.1864789791872,35.5896796158384,59.4563226553679,54.7910755184588,79.9805017605426,74.2813171923848,73.7031915096462,43.8760241245629,30.0703322614094,2.84501851429623,3.08470984046268,5.63538678365402,9.16430975303914,21.7226785627741,18.0950415317022,10.7502113111237,20.9606410131035,24.1778040875717,15.1778511623815,33.2026942337607,2.33583148002532,2.55526693647164,3.37293168577281,4.86864291332407,3.13530307678142,8.40265310878685,31.3588789821384,34.0483976227574,21.9649130550465,11.5014565221884,43.9126318248834,27.4593152340813,28.7939920859707,35.1618930502948,18.332853811808,60.7837995648129,0.947457058852424,1.30371981153621,3.05541154395339,4.45911471748154,7.53778158488171,47.3706845363167,27.3187107000918,16.7093252752562,22.589398344175,17.3805697836661,41.7851452525132,60.7851136167952,46.1430496875022,161.346673815021,131.081269800309,48.6846630288846,34.7680300343963,9.15138362930414,2.93029216480508,1.14754461763673,6.81671503451807,1.57754109708128,1.95219372148319,1.93881057959519,1.43381278771531,0.445597348164788,0.849229592366497,0.809621403349789,1.16902343164525,0.790575555893047,5.78378369559253,28.9557773824868,15.6697731227185,9.44744364250741,50.8107978755409,15.9294166007955,0.971122544619926,2.11626489875326,2.07465587731488,3.54362271456927,16.6014979889721,48.5845191156256,17.8131527443978,12.1209108650805,9.7971394960103,16.8669773719998,10.3135543248187,38.469675450178,1.8006109403131,4.52755393239641,2.7863814554107,8.33499098118686,4.8159580752559,4.77192159746151,25.5750557256263,47.1690133208058,58.6774836292782,9.04166432025344,6.43056386471772,15.1776561094151,7.65974146587579,4.17803204010978,3.61109979439135,64.417264895197,3.70850604021019,26.3141156428693,4.12773735926445,63.3365283604414,13.9392658183471,18.4537207423384,36.1469513666306,22.0971958992012,33.8682514623252,27.2253948394715,32.4588010125139,0.316335993581135,2.43983360552218,2.26811215725783,4.18176592028937,11.1364907510551,7.55240339754996,16.6959980565179,14.9200886930897,9.33227807700909,20.5041973318685,1.12738587736838,0.897099276263873,1.82004339502807,0.777804753376191,3.87479470433193,11.4890165333729,8.21500670520278,2.73429208172295,1.36317147753424,4.34851417486811,2.88030006257865,46.137623611714,3.24360344464263,10.8873614594717,25.984164595559,17.7236428710807,27.2193456050333,26.4429988943931,25.6979777283764,25.8474111867258,25.1482461961499,27.3238961720838,34.9873791855711,28.2862814422569,28.0504565235765,14.0572837841431,8.21348027484039,0.0897138566094757,0.839423081820392,23.9555096599916,50.486585896368,108.792064814755,8.7891035422417,26.0817494098389,1.12950368523413,0.920650473014354,0,2.06223818812425,3.42541259885321,2.2661816921691,2.70009000092722,2.2516060161211,0.906284817968409,0.51776031175182,0.31136204275253,1.59609949360412,1.87806966329548,1.70174701947806,2.30574478890781,7.90527086335061,5.11167473943715,7.0051919461224,5.45562656306086,8.33900798820532,8.87177549615839,8.11093267960128,9.27050923951836,5.89031402124797,8.50044940543076,6.66811167796303,6.2577536010222,5.59436739344745,6.1812885120496,6.62395140604788,9.94320831917705,6.21165321557681,7.86839426826159,6.1045494985578,6.96409415073447,6.8537832392258,5.67076715905595,3.41990624869196,7.06181391998481,5.05028044491965,6.64356101495375,6.30428687203606,2.04615521584845,7.12709469455443,5.5942917184531,2.99772693525535,20.1181183263051,17.6194264319605,14.1553365730944,6.17655973534643,10.2021847672985|short_description=p1@Rtp4}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=67775
|HGNC=
|MCL_coexpression_id=1264
|TSSclassifier=NA
|UniProt=Q9ER80,Q923D9
|association_with_transcript=0bp_to_ENSMUST00000038423,NM_023386,uc007ytw.2_5end
|cluster_id=chr16:23609981..23610047,+
|description=CAGE_peak_1_at_Rtp4_5end
|id=chr16:23609981..23610047,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!6.58e-08!130;UBERON:0000925!6.58e-08!130;UBERON:0006595!6.58e-08!130;UBERON:0000926!2.24e-07!193;UBERON:0004120!2.24e-07!193;UBERON:0006603!2.24e-07!193;UBERON:0004921!3.05e-07!126;UBERON:0004185!3.05e-07!126;UBERON:0001007!3.09e-07!128;UBERON:0001555!3.09e-07!128;UBERON:0007026!3.09e-07!128
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.69e-08,118;UBERON:0000925,4.69e-08,118;UBERON:0006595,4.69e-08,118;UBERON:0004921,2.19e-07,114;UBERON:0001007,2.28e-07,116;UBERON:0001555,2.28e-07,116;UBERON:0007026,2.28e-07,116
|phase1_expression=3.52327463630547,11.5161884520989,10.0099832665698,25.7094579610806,29.5528480668345,9.9048770428015,8.87728034262997,44.6766699107854,3.51971805379167,2.57470978954193,1.88339765048055,1.43589886191606,79.2659379581483,47.6441193183536,38.6407323706169,55.2757479974225,13.9912375625629,40.6946193312127,23.5836825801871,16.9755860719212,25.9382034960763,16.0851340945434,17.5003858723087,10.5594999043648,6.65286915094793,7.46501553349526,15.0766698655676,9.9116767035509,22.0427166569394,16.6339885641554,10.4213340007993,0,0,0,8.37669697278696,5.15327400611326,5.3084032628216,77.8468833170648,63.2881629064278,68.5816104605676,48.2349820185432,43.7149110373405,41.2683800076481,13.2191658874356,12.8748702648783,2.75320128242522,135.353702572211,3.05235218932625,15.5977189741475,17.6931208157598,30.6570263359544,5.75010257459886,12.080347636157,23.9369506863744,29.9123481236793,21.0952737549477,14.0401385569991,44.8634720281375,0,0,0,6.77689064138264,57.8041617472241,92.6896708799841,94.9311708064295,95.9148155177235,22.1704081783619,8.06858441175265,0.414758449233911,0.405017814995072,0,0.571301968807607,1.54607978666129,0.122490799214954,0,0,4.40463523997555,2.80912143787413,1.68967186581868,0.263772575460388,0.457438218012048,0,1.67509799400829,2.25105044012672,2.75036845998258,0.294628585473668,3.27454865837937,0.186399445825301,56.4917402265553,51.5398039928277,107.829589797024,86.0423876981386,3.39985666853875,3.77792234146472,18.1937396885347,14.7848872742121,16.0106638950197,6.30592193538814,5.45550609666024,3.88673531961374,2.95771181531029,5.13305909657271,0,0,3.030874574157,0.760079596425296,3.53867111510348,30.7154636444271,76.6456135595628,25.383605780085,2.25530924795977,3.34912026143355,6.91846491768175,38.5849959814714,30.4554751481475,31.4166478324189,72.6753205139059,49.16378135277,38.9228642857945,8.08834249737046,7.06692859073259,7.27312879702833,11.1835056730873,3.51336956413857,1.8850203613211,29.377561348988,2.75574786363617,2.39961092397363,1.90605340609597,5.69204429738326,8.6925114535539,2.63874139437015,3.82413504423008,2.55715457330331,4.36354893575076,2.43361894601636,9.67473956578005,11.0722203842983,21.9868799837297,16.8353484709179,1.17108398666433,1.14951052216736,0.900310649026746,2.10986744970001,4.42237244483631,3.58718416797579,2.99845518591132,6.20888089773638,0.862271971731369,0.567318240503458,1.58356011747554,2.6303487891309,1.66828349535359,2.43776516565517,12.5527103208846,1.99034266818493,0,0.772043721344145,0.568326998791185,1.65700618028402,3.04883877975425,5.76198596675248,3.55117103377815,3.73852040320067,4.01094493507183,6.97601834251224,14.7550370769791,18.7992201211143,6.91151369636618,11.6558899496158,13.7816976227955,18.7135983904425,38.860370406516,25.633425983231,4.20579897128254,5.65975368086064,55.1799367582943,91.4998960655863,1.91959425481711,2.78684006232526,1.67527699718721,3.63030344322017,7.56085349072559,39.1864789791872,35.5896796158384,59.4563226553679,54.7910755184588,79.9805017605426,74.2813171923848,73.7031915096462,43.8760241245629,30.0703322614094,2.84501851429623,3.08470984046268,5.63538678365402,9.16430975303914,21.7226785627741,18.0950415317022,10.7502113111237,20.9606410131035,24.1778040875717,15.1778511623815,33.2026942337607,2.33583148002532,2.55526693647164,3.37293168577281,4.86864291332407,3.13530307678142,8.40265310878685,31.3588789821384,34.0483976227574,21.9649130550465,11.5014565221884,43.9126318248834,27.4593152340813,28.7939920859707,35.1618930502948,18.332853811808,60.7837995648129,0.947457058852424,1.30371981153621,3.05541154395339,4.45911471748154,7.53778158488171,47.3706845363167,27.3187107000918,16.7093252752562,22.589398344175,17.3805697836661,41.7851452525132,60.7851136167952,46.1430496875022,161.346673815021,131.081269800309,48.6846630288846,34.7680300343963,9.15138362930414,2.93029216480508,1.14754461763673,6.81671503451807,1.57754109708128,1.95219372148319,1.93881057959519,1.43381278771531,0.445597348164788,0.849229592366497,0.809621403349789,1.16902343164525,0.790575555893047,5.78378369559253,28.9557773824868,15.6697731227185,9.44744364250741,50.8107978755409,15.9294166007955,0.971122544619926,2.11626489875326,2.07465587731488,3.54362271456927,16.6014979889721,48.5845191156256,17.8131527443978,12.1209108650805,9.7971394960103,16.8669773719998,10.3135543248187,38.469675450178,1.8006109403131,4.52755393239641,2.7863814554107,8.33499098118686,4.8159580752559,4.77192159746151,25.5750557256263,47.1690133208058,58.6774836292782,9.04166432025344,6.43056386471772,15.1776561094151,7.65974146587579,4.17803204010978,3.61109979439135,64.417264895197,3.70850604021019,26.3141156428693,4.12773735926445,63.3365283604414,13.9392658183471,18.4537207423384,36.1469513666306,22.0971958992012,33.8682514623252,27.2253948394715,32.4588010125139,0.316335993581135,2.43983360552218,2.26811215725783,4.18176592028937,11.1364907510551,7.55240339754996,16.6959980565179,14.9200886930897,9.33227807700909,20.5041973318685,1.12738587736838,0.897099276263873,1.82004339502807,0.777804753376191,3.87479470433193,11.4890165333729,8.21500670520278,2.73429208172295,1.36317147753424,4.34851417486811,2.88030006257865,46.137623611714,3.24360344464263,10.8873614594717,25.984164595559,17.7236428710807,27.2193456050333,26.4429988943931,25.6979777283764,25.8474111867258,25.1482461961499,27.3238961720838,34.9873791855711,28.2862814422569,28.0504565235765,14.0572837841431,8.21348027484039,0.0897138566094757,0.839423081820392,23.9555096599916,50.486585896368,108.792064814755,8.7891035422417,26.0817494098389,1.12950368523413,0.920650473014354,0,2.06223818812425,3.42541259885321,2.2661816921691,2.70009000092722,2.2516060161211,0.906284817968409,0.51776031175182,0.31136204275253,1.59609949360412,1.87806966329548,1.70174701947806,2.30574478890781,7.90527086335061,5.11167473943715,7.0051919461224,5.45562656306086,8.33900798820532,8.87177549615839,8.11093267960128,9.27050923951836,5.89031402124797,8.50044940543076,6.66811167796303,6.2577536010222,5.59436739344745,6.1812885120496,6.62395140604788,9.94320831917705,6.21165321557681,7.86839426826159,6.1045494985578,6.96409415073447,6.8537832392258,5.67076715905595,3.41990624869196,7.06181391998481,5.05028044491965,6.64356101495375,6.30428687203606,2.04615521584845,7.12709469455443,5.5942917184531,2.99772693525535,20.1181183263051,17.6194264319605,14.1553365730944,6.17655973534643,10.2021847672985
|short_description=p1@Rtp4
}}

Latest revision as of 19:40, 1 October 2015

Short description:p1@Rtp4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rtp4_5end
Coexpression cluster:MCL_coexpression_mm9:1264
Association with transcript: 0bp_to_ENSMUST00000038423, NM_023386, uc007ytw.2_5end
EntrezGene:Rtp4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rtp4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I511.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I610.01
CD326+ enterocyte, pool1.CNhs13542.11848-124I325.71
CD326+ enterocyte, pool2.CNhs13197.11849-124I429.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I79.90
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.88
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E944.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.44
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E479.27
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E847.64
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A138.64
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A355.28
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A513.99
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A240.69
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A423.58
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A616.98
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A325.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H216.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I917.50
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D110.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.65
GP2+ M cell, pool1.CNhs13228.11845-124H97.47
GP2+ M cell, pool2.CNhs13231.11846-124I115.08
GP2+ M cell, pool3.CNhs13240.11847-124I29.91
Ileum epithelium, pool1.CNhs13199.10252-104B922.04
Ileum epithelium, pool2.CNhs13232.10253-104C116.63
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.42
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.38
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.15
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.31
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G877.85
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H163.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H368.58
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G948.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H243.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H441.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D813.22
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.87
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.75
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7135.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.05
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B815.60
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C317.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C430.66
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A212.08
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I923.94
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A129.91
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C121.10
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E114.04
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C544.86
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.78
Mouse Meningeal cells, donor3.CNhs12109.11639-122D157.80
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C792.69
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E794.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D295.91
Mouse Microglia, donor1.CNhs12629.11718-123C822.17
Mouse Microglia, donor2.CNhs12634.11736-123E88.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D956.49
Mouse Schwann, donor2.CNhs12573.11746-123F951.54
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3107.83
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F786.04
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F418.19
Mouse hepatocyte, donor8.CNhs13091.11824-124F614.78
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A716.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.31
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B630.72
accessory axillary lymph node, adult.CNhs10475.1063-29H976.65
adrenal gland, adult.CNhs10508.49-24D725.38
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I16.92
adrenal gland, embryo E18.CNhs11026.1262-18F538.58
adrenal gland, neonate N00.CNhs11191.1311-23C130.46
adrenal gland, neonate N25.CNhs11223.1377-27I331.42
amnion, adult pregnant day17.5.CNhs10488.583-22A872.68
aorta, adult.CNhs10498.46-23H149.16
bone (os femoris), adult.CNhs10483.56-12G238.92
bone (os femoris), neonate N02.CNhs11227.1985-43F58.09
bone (os femoris), neonate N16.CNhs11225.1525-43A67.07
bone (os femoris), neonate N20.CNhs11195.1350-25C37.27
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H729.38
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.76
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.91
corpora quadrigemina, adult.CNhs10501.16-22A45.69
corpus striatum, adult.CNhs10487.19-21D88.69
corpus striatum, neonate N00.CNhs11226.630-43F12.64
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.67
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A211.07
epididymis, adult.CNhs10490.58-23B221.99
eyeball, adult.CNhs10484.31-12G416.84
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C64.42
eyeball, neonate N01.CNhs11140.1532-43E73.59
eyeball, neonate N02.CNhs11205.1551-44G83.00
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B512.55
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I95.76
heart, embryo E14.CNhs10597.403-26D43.55
heart, embryo E15.CNhs11017.431-16C83.74
heart, embryo E16.CNhs11021.457-17C64.01
heart, embryo E17.CNhs11025.479-18E56.98
heart, embryo E18.CNhs11030.1283-20G314.76
heart, neonate N00.CNhs11213.639-21E318.80
heart, neonate N03.CNhs11221.1349-25I26.91
heart, neonate N10.CNhs11118.749-24G111.66
heart, neonate N16.CNhs11209.782-15G113.78
heart, neonate N20.CNhs11127.821-26I618.71
heart, neonate N25.CNhs11196.1351-25D338.86
heart, neonate N30.CNhs11202.1390-42D225.63
hippocampus, adult.CNhs10478.13-16E84.21
hippocampus, neonate N00.CNhs11228.627-43G15.66
intestinal mucosa, adult.CNhs10506.860-29I355.18
intestine, adult.CNhs10496.178-9A391.50
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H43.63
intestine, embryo E17.CNhs10582.482-18D37.56
intestine, embryo E18.CNhs10526.1289-20F739.19
intestine, neonate N00.CNhs11126.644-26D135.59
intestine, neonate N01.CNhs11192.1322-23E959.46
intestine, neonate N06.CNhs11102.688-20B854.79
intestine, neonate N07.CNhs11095.720-20F279.98
intestine, neonate N10.CNhs11098.755-23A574.28
intestine, neonate N20.CNhs11187.827-18D173.70
intestine, neonate N25.CNhs11121.1352-25E343.88
intestine, neonate N30.CNhs11131.1384-42G130.07
kidney, embryo E14.CNhs10606.411-4I92.85
kidney, embryo E15.CNhs10997.434-16F83.08
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I29.16
kidney, embryo E18.CNhs11001.1288-20C721.72
kidney, neonate N00.CNhs11214.646-21G718.10
kidney, neonate N10.CNhs11206.758-6D510.75
kidney, neonate N20.CNhs11113.832-19I120.96
kidney, neonate N25.CNhs11122.1353-25F324.18
kidney, neonate N30.CNhs11203.1385-42H115.18
liver, adult pregnant day01.CNhs10466.508-5B233.20
liver, embryo E12.CNhs10601.355-15F82.34
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E13.37
liver, embryo E15.CNhs10520.433-16D74.87
liver, embryo E16.CNhs10523.462-17F53.14
liver, embryo E17.CNhs10510.481-18A38.40
liver, embryo E18.CNhs10579.499-43G431.36
liver, neonate N00.CNhs11117.641-24F434.05
liver, neonate N03.CNhs11123.1345-25G221.96
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H243.91
liver, neonate N10.CNhs11115.751-24B927.46
liver, neonate N20.CNhs11220.823-25A328.79
liver, neonate N25.CNhs11198.1368-26H135.16
liver, neonate N30.CNhs11106.1382-42D118.33
lung, adult.CNhs10474.28-22B160.78
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C53.06
lung, embryo E16.CNhs10998.458-17B64.46
lung, embryo E17.CNhs10605.480-44A67.54
lung, embryo E18.CNhs10583.1287-20I647.37
lung, neonate N00.CNhs11224.640-42C627.32
lung, neonate N06.CNhs11212.683-20E516.71
lung, neonate N07.CNhs11111.715-19A322.59
lung, neonate N10.CNhs11219.750-23E617.38
lung, neonate N20.CNhs11109.822-18A441.79
lung, neonate N25.CNhs11119.1359-25C760.79
lung, neonate N30.CNhs11133.1394-42H246.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1161.35
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1131.08
mammary gland, adult lactating day02.CNhs10480.595-22B648.68
mammary gland, adult pregnant day19.CNhs10476.588-5H234.77
medulla oblongata, adult.CNhs10477.17-12C29.15
medulla oblongata, neonate N30.CNhs11200.1396-42A32.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.82
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I95.78
ovary, adult.CNhs10507.91-2I728.96
ovary, embryo E18.CNhs11040.505-44H715.67
ovary, neonate N00.CNhs11217.1299-22I49.45
oviduct, adult pregnant day01.CNhs10500.988-6G650.81
pancreas, adult.CNhs10486.34-16E415.93
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I716.60
pancreas, neonate N00.CNhs11105.645-26G948.58
pancreas, neonate N01.CNhs11138.1531-43D717.81
pancreas, neonate N02.CNhs11139.1539-43D812.12
pancreas, neonate N16.CNhs11136.787-43B69.80
pancreas, neonate N25.CNhs11094.1555-45E216.87
pancreas, neonate N30.CNhs11182.1548-44H510.31
pituitary gland, adult.CNhs10493.21-1G838.47
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C74.53
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B98.33
pituitary gland, embryo E16.CNhs11036.449-43F64.82
pituitary gland, embryo E17.CNhs11039.1265-44F54.77
pituitary gland, neonate N00.CNhs11190.1308-22E925.58
placenta, adult pregnant day10.CNhs10472.539-13I747.17
placenta, adult pregnant day17.CNhs10464.577-18G358.68
prostate, adult.CNhs10470.859-1F89.04
skin, adult.CNhs10492.30-1C36.43
skin, neonate N00.CNhs11124.650-25G415.18
skin, neonate N03.CNhs11215.662-22H37.66
skin, neonate N06.CNhs11097.693-20I54.18
skin, neonate N10.CNhs11108.762-6C43.61
small intestine, neonate N16.CNhs11114.790-21I164.42
spinal cord, adult.CNhs10505.24-13C93.71
spleen, adult.CNhs10465.25-2G226.31
spleen, embryo E16.CNhs11035.461-43C14.13
spleen, embryo E18.CNhs11011.1271-21F263.34
spleen, neonate N10.CNhs11116.752-24D113.94
spleen, neonate N20.CNhs11112.824-19H118.45
spleen, neonate N25.CNhs11099.1354-25G336.15
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C622.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C933.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D327.23
stomach, adult.CNhs10503.33-1H632.46
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D42.27
stomach, embryo E17.CNhs11006.1035-18D54.18
stomach, embryo E18.CNhs10999.1286-20C611.14
stomach, neonate N03.CNhs11193.1340-24B87.55
stomach, neonate N07.CNhs11210.718-18A916.70
stomach, neonate N25.CNhs11104.1355-25E414.92
stomach, neonate N30.CNhs11134.1386-42I19.33
submandibular gland, adult.CNhs10469.59-29C120.50
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I53.87
testis, embryo E18.CNhs11027.503-18G511.49
testis, neonate N00.CNhs11189.1300-22B78.22
testis, neonate N07.CNhs11222.726-26I42.73
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H34.35
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B546.14
thymus, embryo E14.CNhs11041.402-44I43.24
thymus, embryo E15.CNhs11005.430-45I210.89
thymus, embryo E16.CNhs11002.456-26C525.98
thymus, embryo E17.CNhs10581.478-18C117.72
thymus, embryo E18.CNhs10595.1273-19G427.22
thymus, neonate N02.CNhs11181.1541-43F826.44
thymus, neonate N03.CNhs11137.2104-43C725.70
thymus, neonate N06.CNhs11197.681-26C425.85
thymus, neonate N07.CNhs11211.713-19D325.15
thymus, neonate N10.CNhs11194.748-24E427.32
thymus, neonate N20.CNhs11186.820-7A234.99
thymus, neonate N25.CNhs11125.1362-25G728.29
thymus, neonate N30.CNhs11132.1393-42G228.05
tongue, adult.CNhs10499.32-1B414.06
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H38.21
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E423.96
uterus, adult pregnant day19.CNhs10497.590-15F550.49
uterus, adult.CNhs10509.92-27E5108.79
vagina, adult.CNhs10502.89-27D58.79
vesicular gland, adult.CNhs10491.51-27F826.08
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F27.91
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.27
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.89
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.50
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.26
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.59
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.94
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.87
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.64
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.13
whole body, embryo E17.5.CNhs10513.490-9F95.59
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B320.12
whole body, neonate N00.CNhs10525.657-19C217.62
whole body, neonate N01.CNhs10576.659-23C614.16
whole body, neonate N06.CNhs10515.692-21D16.18
whole body, neonate N10.CNhs10518.761-6B410.20





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure4.69e-08118
endoderm4.69e-08118
presumptive endoderm4.69e-08118
subdivision of digestive tract2.19e-07114
digestive system2.28e-07116
digestive tract2.28e-07116
primitive gut2.28e-07116
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr16:23609981..23610047,%2B&oldid=4318846"