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FFCP PHASE1:Mm9::chr5:122499831..122499891,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:122499831..122499891,-
|DHSsupport=NA
|short_description=p1@Cux2
|DPIdataset=NA
|description=CAGE_peak_1_at_Cux2_5end
|association_with_transcript=0bp_to_ENSMUST00000111752_5end
|EntrezGene=13048
|EntrezGene=13048
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P70298
|UniProt=P70298
|association_with_transcript=0bp_to_ENSMUST00000111752_5end
|cluster_id=chr5:122499831..122499891,-
|description=CAGE_peak_1_at_Cux2_5end
|id=chr5:122499831..122499891,-
|ontology_enrichment_celltype=CL:0000540!1.52e-15!33;CL:0000047!1.52e-15!33;CL:0000031!1.52e-15!33;CL:0000404!1.52e-15!33;CL:0000117!1.78e-13!23;CL:0000337!1.78e-13!23;CL:0000221!3.37e-11!44;CL:0000133!3.37e-11!44;CL:0002319!6.63e-11!43;CL:0000393!3.32e-10!39;CL:0000211!3.32e-10!39;CL:0000055!7.16e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000540,3.67e-18,33;CL:0000047,3.67e-18,33;CL:0000031,3.67e-18,33;CL:0000404,3.67e-18,33;CL:0000117,2.19e-16,23;CL:0000337,2.19e-16,23;CL:0000393,2.53e-13,39;CL:0000211,2.53e-13,39;CL:0000221,5.02e-12,44;CL:0000133,5.02e-12,44;CL:0002319,1.14e-11,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.31e-28!73;UBERON:0005743!1.31e-28!73;UBERON:0000073!4.15e-27!75;UBERON:0001016!4.15e-27!75;UBERON:0002346!3.96e-26!71;UBERON:0003075!3.96e-26!71;UBERON:0007284!3.96e-26!71;UBERON:0004121!2.13e-24!102;UBERON:0000924!2.13e-24!102;UBERON:0006601!2.13e-24!102;UBERON:0000033!4.98e-23!63;UBERON:0001049!1.50e-22!52;UBERON:0005068!1.50e-22!52;UBERON:0006241!1.50e-22!52;UBERON:0007135!1.50e-22!52;UBERON:0000955!1.66e-21!50;UBERON:0006238!1.66e-21!50;UBERON:0002616!6.48e-21!49;UBERON:0003056!3.08e-20!49;UBERON:0002020!1.08e-18!34;UBERON:0003080!4.24e-18!40;UBERON:0002780!2.05e-17!39;UBERON:0001890!2.05e-17!39;UBERON:0006240!2.05e-17!39;UBERON:0002791!4.11e-16!29;UBERON:0003528!4.11e-16!29;UBERON:0001893!4.11e-16!29;UBERON:0000956!8.13e-12!21;UBERON:0001869!8.13e-12!21;UBERON:0000203!8.13e-12!21;UBERON:0007811!5.04e-10!86;UBERON:0002619!1.52e-09!17;UBERON:0002021!1.62e-08!10;UBERON:0000411!1.62e-08!10;UBERON:0001950!1.62e-08!10;UBERON:0000468!5.38e-08!333;UBERON:0000153!1.82e-07!94;UBERON:0004111!1.97e-07!122;UBERON:0000025!3.00e-07!114;UBERON:0000922!9.44e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.27e-31,73;UBERON:0001016,1.54e-29,75;UBERON:0002346,1.54e-27,64;UBERON:0003075,1.54e-27,64;UBERON:0007284,1.54e-27,64;UBERON:0000073,1.47e-26,54;UBERON:0004121,2.81e-26,95;UBERON:0000924,2.81e-26,95;UBERON:0006601,2.81e-26,95;UBERON:0001049,3.57e-25,52;UBERON:0005068,3.57e-25,52;UBERON:0006241,3.57e-25,52;UBERON:0007135,3.57e-25,52;UBERON:0010314,5.72e-24,92;UBERON:0010371,2.83e-23,73;UBERON:0002020,3.78e-22,34;UBERON:0000955,9.17e-22,47;UBERON:0006238,9.17e-22,47;UBERON:0003056,1.17e-21,49;UBERON:0002616,4.65e-21,46;UBERON:0003080,1.47e-19,40;UBERON:0003528,6.12e-19,29;UBERON:0002791,6.12e-19,29;UBERON:0001893,6.12e-19,29;UBERON:0002780,9.82e-19,39;UBERON:0001890,9.82e-19,39;UBERON:0006240,9.82e-19,39;UBERON:0000956,1.31e-13,21;UBERON:0001869,1.31e-13,21;UBERON:0000203,1.31e-13,21;UBERON:0002619,8.38e-11,17;UBERON:0002021,3.21e-10,10;UBERON:0000411,3.21e-10,10;UBERON:0001950,3.21e-10,10
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,4.16712121740242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.388859798148567,0,1.43752564364972,0,0,0,0,0,0,10.3181395038395,8.46385566835253,10.775133859605,0,0,0,0,0,0.599200221036809,0.768436610643109,10.1615820062308,9.99043943654511,7.36137364729837,7.7125765789027,7.73039893330647,9.30930074033651,6.80502844229478,14.7075005857603,3.30347642998166,12.7687338085188,11.6740965274745,9.36392642884376,7.22752384459036,6.25096044668112,12.5632349550621,11.2552522006336,9.32069311438542,5.00868595305235,6.54909731675874,7.82877672466262,0.151452386666368,0,0.289864488701678,0,0,0,0,0,0.983110940922263,0,0,0,2.11265129665021,0,0,0,0,0,0,0.68510327831436,0,6.23456984072264,0.693941307064543,0.913396434936424,0.461230994512117,1.3565037649736,1.05829836422134,3.01599819191221,0,0.144599356919912,0,0,0,0,0,16.9812862266697,12.9856958224342,0,0,0,0,17.3757141709594,7.77751024791665,5.02617408451458,19.8159725019195,21.9915293304084,13.5062228963714,13.7905073607594,0.407357455401265,0.373220911830279,0.505445516867349,3.78795340595653,1.43132487258974,1.14951052216736,0.720248519221397,1.20563854268572,2.85753296435577,2.8185018462667,2.81105173679186,7.76110112217047,0,0,0.351902248327898,0.43839146485515,0,0,0,0.796137067273973,0,0,0,0.828503090142008,0.938104239924385,1.08037236876609,1.89395788468168,1.18058539048442,0.617068451549513,1.62773761325285,0,0.467061369468678,1.15191894939436,0.656669856316381,1.4592385718254,4.5321996101853,3.07370161407471,1.74468344388483,3.57492912559016,5.35103984372279,0.330418782983798,0,2.98603550749328,1.62565670302307,0.902072229254653,1.81515172161008,1.11189021922435,0.760902504450237,0,0.988193728344065,0.502670417600539,1.1937388322469,0.779856348476481,1.79763881730844,0,0.398282546508734,1.51734320762465,1.02823661348756,1.1270773567308,1.62921062276251,2.13347735884388,2.24434623649019,2.46622494784603,1.03327103585722,1.255989822731,1.1105744752962,0,0.500535317148282,0,0.224862112384854,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0,0,0,2.21703828199926,0.37898282354097,0.488894929326078,0.848725428875941,0,0.502518772325447,0.238043640886014,0.195133647857799,0.315270288212382,0.44292937929755,0.478364305972461,0.163863314715738,0.690739927463582,0.433947175744535,0,0,0,0,13.9679013289379,15.003095883802,0,0.252470927204373,0.94652465824877,2.34263246577983,1.93881057959519,1.19484398976276,2.45078541490634,1.98153571552183,2.83367491172426,2.04579100537918,3.16230222357219,8.9969968598106,0.709700426041343,0.890328018336276,1.46598263418218,1.64970122972535,0,1.21390318077491,0.604647113929502,0.188605079755898,0,0.922305443831782,0,0.727067458955011,2.13898427030833,0.948110273807448,3.16255825724996,1.03135543248187,4.42571487479924,0.900305470156551,1.4229455216103,1.71469628025274,1.77340233642274,1.24858172321449,0.658196082408484,0.608929898229199,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0,0.291480836629851,12.6089205367147,0.341741761595705,0,0.370389054739423,0,0.136694227721025,0,0,0,0,0.954670618015114,0.949007980743406,1.21991680276109,1.29606408986162,0.418176592028937,0.655087691238533,1.07891477107857,0.826534557253359,0.785267825952089,0.518459893167171,0,0,0.598066184175915,0.330916980914195,0.388902376688095,0.516639293910924,0.675824501963113,0.469428954583016,0.781226309063701,1.8874681996628,0,0.288030006257865,0,0.405450430580328,0.205421914329655,0.25984164595559,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0.443971906748129,0.269141569828427,0,2.51146472241848,0,0.183151624267265,0,5.517293144389,23.1548255472997,20.714635642823,25.7802981047728,22.3409137046794,23.9778881919725,41.5466643564335,27.675922509504,24.7676661773321,26.7354021300681,34.1721805756201,1.14166082342594,3.19219898720825,3.07320490357441,1.21553358534147,2.30574478890781,1.83843508450014,0.666740183404846,1.64828045791115,1.92551525755089,1.51618327058278,2.02783439912192,2.64076877940507,1.96647165686753,2.30490548657529,1.37845125493472,0.952587382566147,0.695305955669133,1.15745532278223,2.06042950401653,2.50238164228475,2.05721551431249,1.4198064492747,1.90748951957857,1.0174249164263,1.41164070622996,1.86152137361688,1.09756783723664,1.31534855718921,1.49384525230448,1.12228454331548,0.949080144993393,1.18205378850676,2.45538625901814,1.85924209423159,1.73615949883027,4.49659040288303,0.701794825336225,1.71896843238639,0.191288332068843,0,0.463735671240843
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,4.16712121740242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.388859798148567,0,1.43752564364972,0,0,0,0,0,0,10.3181395038395,8.46385566835253,10.775133859605,0,0,0,0,0,0.599200221036809,0.768436610643109,10.1615820062308,9.99043943654511,7.36137364729837,7.7125765789027,7.73039893330647,9.30930074033651,6.80502844229478,14.7075005857603,3.30347642998166,12.7687338085188,11.6740965274745,9.36392642884376,7.22752384459036,6.25096044668112,12.5632349550621,11.2552522006336,9.32069311438542,5.00868595305235,6.54909731675874,7.82877672466262,0.151452386666368,0,0.289864488701678,0,0,0,0,0,0.983110940922263,0,0,0,2.11265129665021,0,0,0,0,0,0,0.68510327831436,0,6.23456984072264,0.693941307064543,0.913396434936424,0.461230994512117,1.3565037649736,1.05829836422134,3.01599819191221,0,0.144599356919912,0,0,0,0,0,16.9812862266697,12.9856958224342,0,0,0,0,17.3757141709594,7.77751024791665,5.02617408451458,19.8159725019195,21.9915293304084,13.5062228963714,13.7905073607594,0.407357455401265,0.373220911830279,0.505445516867349,3.78795340595653,1.43132487258974,1.14951052216736,0.720248519221397,1.20563854268572,2.85753296435577,2.8185018462667,2.81105173679186,7.76110112217047,0,0,0.351902248327898,0.43839146485515,0,0,0,0.796137067273973,0,0,0,0.828503090142008,0.938104239924385,1.08037236876609,1.89395788468168,1.18058539048442,0.617068451549513,1.62773761325285,0,0.467061369468678,1.15191894939436,0.656669856316381,1.4592385718254,4.5321996101853,3.07370161407471,1.74468344388483,3.57492912559016,5.35103984372279,0.330418782983798,0,2.98603550749328,1.62565670302307,0.902072229254653,1.81515172161008,1.11189021922435,0.760902504450237,0,0.988193728344065,0.502670417600539,1.1937388322469,0.779856348476481,1.79763881730844,0,0.398282546508734,1.51734320762465,1.02823661348756,1.1270773567308,1.62921062276251,2.13347735884388,2.24434623649019,2.46622494784603,1.03327103585722,1.255989822731,1.1105744752962,0,0.500535317148282,0,0.224862112384854,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0,0,0,2.21703828199926,0.37898282354097,0.488894929326078,0.848725428875941,0,0.502518772325447,0.238043640886014,0.195133647857799,0.315270288212382,0.44292937929755,0.478364305972461,0.163863314715738,0.690739927463582,0.433947175744535,0,0,0,0,13.9679013289379,15.003095883802,0,0.252470927204373,0.94652465824877,2.34263246577983,1.93881057959519,1.19484398976276,2.45078541490634,1.98153571552183,2.83367491172426,2.04579100537918,3.16230222357219,8.9969968598106,0.709700426041343,0.890328018336276,1.46598263418218,1.64970122972535,0,1.21390318077491,0.604647113929502,0.188605079755898,0,0.922305443831782,0,0.727067458955011,2.13898427030833,0.948110273807448,3.16255825724996,1.03135543248187,4.42571487479924,0.900305470156551,1.4229455216103,1.71469628025274,1.77340233642274,1.24858172321449,0.658196082408484,0.608929898229199,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0,0.291480836629851,12.6089205367147,0.341741761595705,0,0.370389054739423,0,0.136694227721025,0,0,0,0,0.954670618015114,0.949007980743406,1.21991680276109,1.29606408986162,0.418176592028937,0.655087691238533,1.07891477107857,0.826534557253359,0.785267825952089,0.518459893167171,0,0,0.598066184175915,0.330916980914195,0.388902376688095,0.516639293910924,0.675824501963113,0.469428954583016,0.781226309063701,1.8874681996628,0,0.288030006257865,0,0.405450430580328,0.205421914329655,0.25984164595559,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0.443971906748129,0.269141569828427,0,2.51146472241848,0,0.183151624267265,0,5.517293144389,23.1548255472997,20.714635642823,25.7802981047728,22.3409137046794,23.9778881919725,41.5466643564335,27.675922509504,24.7676661773321,26.7354021300681,34.1721805756201,1.14166082342594,3.19219898720825,3.07320490357441,1.21553358534147,2.30574478890781,1.83843508450014,0.666740183404846,1.64828045791115,1.92551525755089,1.51618327058278,2.02783439912192,2.64076877940507,1.96647165686753,2.30490548657529,1.37845125493472,0.952587382566147,0.695305955669133,1.15745532278223,2.06042950401653,2.50238164228475,2.05721551431249,1.4198064492747,1.90748951957857,1.0174249164263,1.41164070622996,1.86152137361688,1.09756783723664,1.31534855718921,1.49384525230448,1.12228454331548,0.949080144993393,1.18205378850676,2.45538625901814,1.85924209423159,1.73615949883027,4.49659040288303,0.701794825336225,1.71896843238639,0.191288332068843,0,0.463735671240843
|short_description=p1@Cux2
}}
}}

Latest revision as of 19:44, 1 October 2015

Short description:p1@Cux2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cux2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000111752_5end
EntrezGene:Cux2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cux2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C310.32
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C710.78
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.16
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.99
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.36
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.81
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.67
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.36
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.23
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.32
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.83
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D76.23
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I33.02
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B216.98
cerebellum, neonate N30.CNhs11135.1395-42I212.99
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A417.38
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F15.03
cortex, adult.CNhs10473.12-14D519.82
cortex, neonate N30.CNhs11107.1392-42F221.99
diencephalon, adult.CNhs10482.20-12F213.51
diencephalon, neonate N30.CNhs11201.1388-42B213.79
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G43.79
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C62.86
eyeball, neonate N01.CNhs11140.1532-43E72.82
eyeball, neonate N02.CNhs11205.1551-44G82.81
eyeball, neonate N16.CNhs11188.777-19A27.76
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G11.46
heart, neonate N20.CNhs11127.821-26I64.53
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E83.57
hippocampus, neonate N00.CNhs11228.627-43G15.35
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I52.99
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G72.24
kidney, neonate N10.CNhs11206.758-6D52.47
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C213.97
medulla oblongata, neonate N30.CNhs11200.1396-42A315.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I99.00
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C912.61
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D91.89
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.51
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A123.15
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A220.71
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A325.78
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D722.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A423.98
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A541.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A627.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A724.77
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A826.74
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A934.17
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H23.07
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron3.67e-1833
neuronal stem cell3.67e-1833
neuroblast3.67e-1833
electrically signaling cell3.67e-1833
CNS neuron (sensu Vertebrata)2.19e-1623
neuroblast (sensu Vertebrata)2.19e-1623
electrically responsive cell2.53e-1339
electrically active cell2.53e-1339
ectodermal cell5.02e-1244
neurectodermal cell5.02e-1244
neural cell1.14e-1143

Uber anatomy
Ontology termp-valuen
central nervous system4.27e-3173
nervous system1.54e-2975
neurectoderm1.54e-2764
neural plate1.54e-2764
presumptive neural plate1.54e-2764
regional part of nervous system1.47e-2654
ectoderm-derived structure2.81e-2695
ectoderm2.81e-2695
presumptive ectoderm2.81e-2695
neural tube3.57e-2552
neural rod3.57e-2552
future spinal cord3.57e-2552
neural keel3.57e-2552
structure with developmental contribution from neural crest5.72e-2492
ecto-epithelium2.83e-2373
gray matter3.78e-2234
brain9.17e-2247
future brain9.17e-2247
pre-chordal neural plate1.17e-2149
regional part of brain4.65e-2146
anterior neural tube1.47e-1940
brain grey matter6.12e-1929
regional part of telencephalon6.12e-1929
telencephalon6.12e-1929
regional part of forebrain9.82e-1939
forebrain9.82e-1939
future forebrain9.82e-1939
cerebral cortex1.31e-1321
cerebral hemisphere1.31e-1321
pallium1.31e-1321
regional part of cerebral cortex8.38e-1117
occipital lobe3.21e-1010
visual cortex3.21e-1010
neocortex3.21e-1010
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