FFCP PHASE1:Mm9::chr13:58909245..58909263,+: Difference between revisions
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{{FFCP|EntrezGene=18212|HGNC=|MCL_coexpression_id=2|UniProt=P15209|association_with_transcript=0bp_to_ENSMUST00000079828,ENSMUST00000109839,ENSMUST00000109840_5end|description=CAGE_peak_5_at_Ntrk2_5end|id=chr13:58909245..58909263,+|ontology_enrichment_celltype=CL:0000117!1.68e-10!23;CL:0000337!1.68e-10!23;CL:0000221!1.73e-09!44;CL:0000133!1.73e-09!44;CL:0002319!3.03e-09!43|ontology_enrichment_celltype_v019_2=CL:0000117,2.52e-16,23;CL:0000337,2.52e-16,23;CL:0002319,1.90e-14,43;CL:0000221,6.62e-14,44;CL:0000133,6.62e-14,44;CL:0000540,2.32e-09,33;CL:0000047,2.32e-09,33;CL:0000031,2.32e-09,33;CL:0000404,2.32e-09,33;CL:0000393,5.42e-07,39;CL:0000211,5.42e-07,39;CL:0002453,8.81e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.12e-28!52;UBERON:0005068!1.12e-28!52;UBERON:0006241!1.12e-28!52;UBERON:0007135!1.12e-28!52;UBERON:0000033!1.37e-28!63;UBERON:0004121!1.64e-28!102;UBERON:0000924!1.64e-28!102;UBERON:0006601!1.64e-28!102;UBERON:0000073!1.82e-28!75;UBERON:0001016!1.82e-28!75;UBERON:0000955!7.91e-28!50;UBERON:0006238!7.91e-28!50;UBERON:0001017!1.14e-27!73;UBERON:0005743!1.14e-27!73;UBERON:0002616!4.42e-27!49;UBERON:0002346!4.20e-26!71;UBERON:0003075!4.20e-26!71;UBERON:0007284!4.20e-26!71;UBERON:0003056!4.67e-23!49;UBERON:0003080!6.44e-22!40;UBERON:0002780!3.16e-21!39;UBERON:0001890!3.16e-21!39;UBERON:0006240!3.16e-21!39;UBERON:0002020!2.14e-19!34;UBERON:0002791!1.62e-16!29;UBERON:0003528!1.62e-16!29;UBERON:0001893!1.62e-16!29;UBERON:0007811!4.59e-15!86;UBERON:0000153!4.72e-14!94;UBERON:0000956!3.38e-12!21;UBERON:0001869!3.38e-12!21;UBERON:0000203!3.38e-12!21;UBERON:0002619!1.28e-10!17;UBERON:0002021!7.09e-09!10;UBERON:0000411!7.09e-09!10;UBERON:0001950!7.09e-09!10;UBERON:0004111!8.22e-08!122;UBERON:0000025!1.46e-07!114;UBERON:0003076!3.43e-07!12;UBERON:0003057!3.43e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.57e-45,54;UBERON:0001016,2.34e-44,75;UBERON:0001017,2.83e-44,73;UBERON:0001049,8.68e-43,52;UBERON:0005068,8.68e-43,52;UBERON:0006241,8.68e-43,52;UBERON:0007135,8.68e-43,52;UBERON:0000955,5.68e-38,47;UBERON:0006238,5.68e-38,47;UBERON:0002346,2.45e-37,64;UBERON:0003075,2.45e-37,64;UBERON:0007284,2.45e-37,64;UBERON:0004121,6.74e-37,95;UBERON:0000924,6.74e-37,95;UBERON:0006601,6.74e-37,95;UBERON:0002616,8.23e-37,46;UBERON:0003080,2.21e-33,40;UBERON:0002780,2.78e-32,39;UBERON:0001890,2.78e-32,39;UBERON:0006240,2.78e-32,39;UBERON:0010371,8.85e-32,73;UBERON:0002020,1.26e-30,34;UBERON:0003056,1.70e-30,49;UBERON:0003528,5.19e-26,29;UBERON:0002791,5.19e-26,29;UBERON:0001893,5.19e-26,29;UBERON:0010314,1.16e-20,92;UBERON:0000956,4.20e-19,21;UBERON:0001869,4.20e-19,21;UBERON:0000203,4.20e-19,21;UBERON:0002619,1.34e-16,17;UBERON:0002021,3.23e-13,10;UBERON:0000411,3.23e-13,10;UBERON:0001950,3.23e-13,10;UBERON:0000025,6.11e-13,114;UBERON:0004111,1.16e-11,122;UBERON:0003076,2.66e-09,12;UBERON:0003057,2.66e-09,12;UBERON:0002420,5.81e-08,8;UBERON:0007245,5.81e-08,8;UBERON:0010009,5.81e-08,8;UBERON:0010011,5.81e-08,8;UBERON:0000454,5.81e-08,8;UBERON:0011216,1.49e-07,194;UBERON:0001894,3.96e-07,10;UBERON:0006222,3.96e-07,10|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,3.48840250208714,6.59058548203415,9.91592485278845,3.49966054063406,8.62515386189829,0,0,0,0,0,0,2.42779753031517,1.05798195854407,1.90149421051854,0.338844532069132,0,0,0,0,14.3808053048834,22.6688800139717,1.45165457231869,1.08004750665353,1.47227472945967,3.14216082844184,5.52171352379034,2.20483438586917,1.43768206527355,0,25.3266526298594,9.19348834213351,9.06278546211836,1.18697658957174,2.01272815925301,2.6045668527838,5.862842979029,10.6924895906019,9.16789486660861,8.2496003932627,6.97621235915604,3.16879057903011,2.87759534666099,0.755715601067855,0.579728977403356,0,0,0,0,0,0.702222100658759,0,0.259786004602869,0,0.985903938436763,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.742210695324124,0,0,0.461230994512117,0.301445281105245,0.705532242814229,0.502666365318702,0,1.87979163995885,0,0.485300549842228,0.220841518460394,0,0,4.09893115816166,1.8850203613211,0,0,0,0,10.1857634795279,40.2600530480391,5.27748278874031,40.5010666048004,39.1244649715406,11.6361304953354,13.6282660976916,1.83310854930569,0.248813941220186,0,1.26265113531884,0.390361328888111,1.14951052216736,1.0803727788321,0.753524089178575,0.476255494059295,0.384341160854549,0.562210347358373,2.06962696591213,0,0,0,0.876782929710299,0.556094498451196,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0.219550115291051,0,19.3466752678997,3.60166143327496,0,0,0,0,0,0,0,0,0,0,0.502670417600539,0,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0,0,0,0.193952487167626,0.140271639780637,0.189709611372772,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.505157755894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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18212 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=P15209 | |||
|association_with_transcript=0bp_to_ENSMUST00000079828,ENSMUST00000109839,ENSMUST00000109840_5end | |||
|cluster_id=chr13:58909245..58909263,+ | |||
|description=CAGE_peak_5_at_Ntrk2_5end | |||
|id=chr13:58909245..58909263,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.68e-10!23;CL:0000337!1.68e-10!23;CL:0000221!1.73e-09!44;CL:0000133!1.73e-09!44;CL:0002319!3.03e-09!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.52e-16,23;CL:0000337,2.52e-16,23;CL:0002319,1.90e-14,43;CL:0000221,6.62e-14,44;CL:0000133,6.62e-14,44;CL:0000540,2.32e-09,33;CL:0000047,2.32e-09,33;CL:0000031,2.32e-09,33;CL:0000404,2.32e-09,33;CL:0000393,5.42e-07,39;CL:0000211,5.42e-07,39;CL:0002453,8.81e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.12e-28!52;UBERON:0005068!1.12e-28!52;UBERON:0006241!1.12e-28!52;UBERON:0007135!1.12e-28!52;UBERON:0000033!1.37e-28!63;UBERON:0004121!1.64e-28!102;UBERON:0000924!1.64e-28!102;UBERON:0006601!1.64e-28!102;UBERON:0000073!1.82e-28!75;UBERON:0001016!1.82e-28!75;UBERON:0000955!7.91e-28!50;UBERON:0006238!7.91e-28!50;UBERON:0001017!1.14e-27!73;UBERON:0005743!1.14e-27!73;UBERON:0002616!4.42e-27!49;UBERON:0002346!4.20e-26!71;UBERON:0003075!4.20e-26!71;UBERON:0007284!4.20e-26!71;UBERON:0003056!4.67e-23!49;UBERON:0003080!6.44e-22!40;UBERON:0002780!3.16e-21!39;UBERON:0001890!3.16e-21!39;UBERON:0006240!3.16e-21!39;UBERON:0002020!2.14e-19!34;UBERON:0002791!1.62e-16!29;UBERON:0003528!1.62e-16!29;UBERON:0001893!1.62e-16!29;UBERON:0007811!4.59e-15!86;UBERON:0000153!4.72e-14!94;UBERON:0000956!3.38e-12!21;UBERON:0001869!3.38e-12!21;UBERON:0000203!3.38e-12!21;UBERON:0002619!1.28e-10!17;UBERON:0002021!7.09e-09!10;UBERON:0000411!7.09e-09!10;UBERON:0001950!7.09e-09!10;UBERON:0004111!8.22e-08!122;UBERON:0000025!1.46e-07!114;UBERON:0003076!3.43e-07!12;UBERON:0003057!3.43e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.57e-45,54;UBERON:0001016,2.34e-44,75;UBERON:0001017,2.83e-44,73;UBERON:0001049,8.68e-43,52;UBERON:0005068,8.68e-43,52;UBERON:0006241,8.68e-43,52;UBERON:0007135,8.68e-43,52;UBERON:0000955,5.68e-38,47;UBERON:0006238,5.68e-38,47;UBERON:0002346,2.45e-37,64;UBERON:0003075,2.45e-37,64;UBERON:0007284,2.45e-37,64;UBERON:0004121,6.74e-37,95;UBERON:0000924,6.74e-37,95;UBERON:0006601,6.74e-37,95;UBERON:0002616,8.23e-37,46;UBERON:0003080,2.21e-33,40;UBERON:0002780,2.78e-32,39;UBERON:0001890,2.78e-32,39;UBERON:0006240,2.78e-32,39;UBERON:0010371,8.85e-32,73;UBERON:0002020,1.26e-30,34;UBERON:0003056,1.70e-30,49;UBERON:0003528,5.19e-26,29;UBERON:0002791,5.19e-26,29;UBERON:0001893,5.19e-26,29;UBERON:0010314,1.16e-20,92;UBERON:0000956,4.20e-19,21;UBERON:0001869,4.20e-19,21;UBERON:0000203,4.20e-19,21;UBERON:0002619,1.34e-16,17;UBERON:0002021,3.23e-13,10;UBERON:0000411,3.23e-13,10;UBERON:0001950,3.23e-13,10;UBERON:0000025,6.11e-13,114;UBERON:0004111,1.16e-11,122;UBERON:0003076,2.66e-09,12;UBERON:0003057,2.66e-09,12;UBERON:0002420,5.81e-08,8;UBERON:0007245,5.81e-08,8;UBERON:0010009,5.81e-08,8;UBERON:0010011,5.81e-08,8;UBERON:0000454,5.81e-08,8;UBERON:0011216,1.49e-07,194;UBERON:0001894,3.96e-07,10;UBERON:0006222,3.96e-07,10 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,3.48840250208714,6.59058548203415,9.91592485278845,3.49966054063406,8.62515386189829,0,0,0,0,0,0,2.42779753031517,1.05798195854407,1.90149421051854,0.338844532069132,0,0,0,0,14.3808053048834,22.6688800139717,1.45165457231869,1.08004750665353,1.47227472945967,3.14216082844184,5.52171352379034,2.20483438586917,1.43768206527355,0,25.3266526298594,9.19348834213351,9.06278546211836,1.18697658957174,2.01272815925301,2.6045668527838,5.862842979029,10.6924895906019,9.16789486660861,8.2496003932627,6.97621235915604,3.16879057903011,2.87759534666099,0.755715601067855,0.579728977403356,0,0,0,0,0,0.702222100658759,0,0.259786004602869,0,0.985903938436763,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.742210695324124,0,0,0.461230994512117,0.301445281105245,0.705532242814229,0.502666365318702,0,1.87979163995885,0,0.485300549842228,0.220841518460394,0,0,4.09893115816166,1.8850203613211,0,0,0,0,10.1857634795279,40.2600530480391,5.27748278874031,40.5010666048004,39.1244649715406,11.6361304953354,13.6282660976916,1.83310854930569,0.248813941220186,0,1.26265113531884,0.390361328888111,1.14951052216736,1.0803727788321,0.753524089178575,0.476255494059295,0.384341160854549,0.562210347358373,2.06962696591213,0,0,0,0.876782929710299,0.556094498451196,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0.219550115291051,0,19.3466752678997,3.60166143327496,0,0,0,0,0,0,0,0,0,0,0.502670417600539,0,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0,0,0,0.193952487167626,0.140271639780637,0.189709611372772,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.505157755894224,0.179397413521912,0.964887042726734,0.369506380333209,0.568474235311454,0.162964976442026,0.169745085775188,0,0,0,0,0.788175720530955,0,0.159454768657487,0.81931657357869,0.345369963731791,0.578596234326046,0,0,0,1.10374698521893,6.26147300952389,5.86058432961016,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0,0,12.2102100240287,0.567760340833074,1.6025904330053,2.60619134965722,1.64970122972535,1.32745138339963,0.485561272309963,0.302323556964751,0.754420319023592,0.295301892880773,0,0.516856586336442,0,1.06949213515416,0.316036757935816,0,2.06271086496374,6.46835250932197,0.720244376125241,1.16422815404479,2.35770738534752,1.59606210278046,2.67553226403106,2.46823530903181,3.34911444026059,0.704015124191131,0,0.220528398054962,0.32977250588296,0.484393280087717,0.603129249281559,0.358117032009409,0.492422699235184,0,4.45020724825223,0,2.06386867963222,1.48155621895769,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0.406638934253697,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0.194451188344048,0,0.168956125490778,0.938857909166032,0.39061315453185,0.838874755405687,0.241584120826006,0,0.316011120628178,1.21635129174099,0.205421914329655,0.389762468933385,0,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,0.386379188064381,0.93841237725591,0.73260649706906,1.07184189539533,0,46.3096510945995,40.5086208126316,40.1026859407578,39.5262319390481,41.1049511862385,36.2589070747056,51.9767325178491,55.3895079965791,84.2844880710621,67.3088405277366,0.103787347584177,0,1.02440163452481,0,0.419226325255965,0.735374033800057,1.33348036680969,1.03017528619447,0.962757628775446,0.505394423527595,0.760437899670719,0.754505365544305,0.842773567228942,0.832326981263301,0.804096565378586,0.952587382566147,0.347652977834566,0.77163688185482,0.824171801606613,1.03039244094078,0.685738504770831,0.354951612318675,0.715308569841963,0.581385666529314,0.470546902076653,1.09998990259179,1.46342378298218,0.263069711437843,1.08643291076689,0,0.355905054372522,0.886540341380071,1.22769312950907,0.464810523557898,0.192906610981141,2.74791635731741,1.16965804222704,1.71896843238639,2.10417165275728,1.54413993383661,0.463735671240843 | |||
|short_description=p5@Ntrk2 | |||
}} |
Latest revision as of 20:02, 1 October 2015
Short description: | p5@Ntrk2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ntrk2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000079828, ENSMUST00000109839, ENSMUST00000109840_5end |
EntrezGene: | Ntrk2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.52e-16 | 23 |
neuroblast (sensu Vertebrata) | 2.52e-16 | 23 |
neural cell | 1.90e-14 | 43 |
ectodermal cell | 6.62e-14 | 44 |
neurectodermal cell | 6.62e-14 | 44 |
neuron | 2.32e-09 | 33 |
neuronal stem cell | 2.32e-09 | 33 |
neuroblast | 2.32e-09 | 33 |
electrically signaling cell | 2.32e-09 | 33 |
electrically responsive cell | 5.42e-07 | 39 |
electrically active cell | 5.42e-07 | 39 |
oligodendrocyte precursor cell | 8.81e-07 | 8 |