Personal tools

FFCP PHASE1:Mm9::chr13:58910044..58910113,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr13:58910044..58910113,+
|DHSsupport=NA
|short_description=p2@Ntrk2
|DPIdataset=NA
|description=CAGE_peak_2_at_Ntrk2_5end
|association_with_transcript=0bp_to_ENSMUST00000078541_5end
|EntrezGene=18212
|EntrezGene=18212
|HGNC=
|HGNC=
|MCL_coexpression_id=283
|TSSclassifier=NA
|UniProt=B5BQV4
|UniProt=B5BQV4
|association_with_transcript=0bp_to_ENSMUST00000078541_5end
|cluster_id=chr13:58910044..58910113,+
|description=CAGE_peak_2_at_Ntrk2_5end
|id=chr13:58910044..58910113,+
|ontology_enrichment_celltype=CL:0000117!1.80e-10!23;CL:0000337!1.80e-10!23;CL:0000221!3.23e-10!44;CL:0000133!3.23e-10!44;CL:0002319!6.82e-10!43;CL:0000333!8.64e-07!10;CL:0000095!8.64e-07!10;CL:0000243!8.64e-07!10;CL:0000123!8.64e-07!10;CL:0000125!8.64e-07!10;CL:0000030!8.64e-07!10;CL:0000339!8.64e-07!10
|ontology_enrichment_celltype_v019_2=CL:0000117,3.19e-12,23;CL:0000337,3.19e-12,23;CL:0000221,3.28e-12,44;CL:0000133,3.28e-12,44;CL:0002319,8.08e-12,43;CL:0000333,7.99e-08,10;CL:0000095,7.99e-08,10;CL:0000243,7.99e-08,10;CL:0000123,7.99e-08,10;CL:0000125,7.99e-08,10;CL:0000030,7.99e-08,10;CL:0000339,7.99e-08,10;CL:0002453,7.36e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!4.20e-30!102;UBERON:0000924!4.20e-30!102;UBERON:0006601!4.20e-30!102;UBERON:0000033!5.92e-28!63;UBERON:0000073!2.37e-27!75;UBERON:0001016!2.37e-27!75;UBERON:0001049!6.93e-27!52;UBERON:0005068!6.93e-27!52;UBERON:0006241!6.93e-27!52;UBERON:0007135!6.93e-27!52;UBERON:0000955!2.53e-26!50;UBERON:0006238!2.53e-26!50;UBERON:0001017!2.80e-26!73;UBERON:0005743!2.80e-26!73;UBERON:0002616!1.32e-25!49;UBERON:0002346!3.36e-24!71;UBERON:0003075!3.36e-24!71;UBERON:0007284!3.36e-24!71;UBERON:0003056!7.40e-20!49;UBERON:0003080!1.59e-19!40;UBERON:0002780!9.14e-19!39;UBERON:0001890!9.14e-19!39;UBERON:0006240!9.14e-19!39;UBERON:0002020!2.04e-17!34;UBERON:0002791!7.24e-15!29;UBERON:0003528!7.24e-15!29;UBERON:0001893!7.24e-15!29;UBERON:0007811!8.53e-15!86;UBERON:0000153!1.13e-12!94;UBERON:0004111!2.84e-11!122;UBERON:0000956!5.29e-11!21;UBERON:0001869!5.29e-11!21;UBERON:0000203!5.29e-11!21;UBERON:0002619!4.80e-10!17;UBERON:0000025!2.29e-09!114;UBERON:0003076!7.27e-08!12;UBERON:0003057!7.27e-08!12;UBERON:0002021!5.81e-07!10;UBERON:0000411!5.81e-07!10;UBERON:0001950!5.81e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.17e-34,54;UBERON:0001016,7.61e-33,75;UBERON:0004121,9.76e-33,95;UBERON:0000924,9.76e-33,95;UBERON:0006601,9.76e-33,95;UBERON:0001049,6.89e-32,52;UBERON:0005068,6.89e-32,52;UBERON:0006241,6.89e-32,52;UBERON:0007135,6.89e-32,52;UBERON:0001017,1.48e-31,73;UBERON:0000955,1.97e-28,47;UBERON:0006238,1.97e-28,47;UBERON:0002616,1.38e-27,46;UBERON:0002346,3.16e-27,64;UBERON:0003075,3.16e-27,64;UBERON:0007284,3.16e-27,64;UBERON:0010371,3.45e-27,73;UBERON:0003080,4.60e-23,40;UBERON:0002780,3.73e-22,39;UBERON:0001890,3.73e-22,39;UBERON:0006240,3.73e-22,39;UBERON:0003056,3.84e-21,49;UBERON:0002020,1.54e-20,34;UBERON:0003528,1.75e-17,29;UBERON:0002791,1.75e-17,29;UBERON:0001893,1.75e-17,29;UBERON:0010314,4.30e-17,92;UBERON:0000956,7.37e-13,21;UBERON:0001869,7.37e-13,21;UBERON:0000203,7.37e-13,21;UBERON:0004111,2.06e-12,122;UBERON:0002619,1.03e-11,17;UBERON:0000025,3.37e-10,114;UBERON:0003076,4.16e-09,12;UBERON:0003057,4.16e-09,12;UBERON:0002021,4.98e-08,10;UBERON:0000411,4.98e-08,10;UBERON:0001950,4.98e-08,10;UBERON:0007023,1.48e-07,51
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,15.7330086779479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69434806608824,55.8144400333943,89.851648738399,125.018425104764,46.0555327147443,57.5010257459886,0,0,0,0,0,0,3.64169629547276,2.64495489636016,5.07065122804943,2.03306719241479,0.889294796111139,0,0.988866362566974,0,40.745615030503,89.9070834452438,1.97010263386108,2.43010688997043,2.10324961351382,36.8489769880907,35.5598350932098,3.42974237801871,2.49198224647415,3.67687514644008,110.115880999389,91.9348834213352,87.09490435629,2.90149833006426,3.65950574409639,2.08365348222704,91.0136576744502,105.799370685956,87.0950012327818,40.6587447953661,37.0166370077668,11.9295645328192,5.30083353332288,18.2127459857353,2.6087803983151,0,0,0,0,0,4.91555470461132,0,0,0,3.94361575374705,0,0,0,0,0,0,2.2836775943812,1.03575153458869,3.11728492036132,0.346970653532272,0.304465478312141,0.461230994512117,0.150722640552623,1.05829836422134,8.29399502775858,0.247194967734374,65.6481080416399,2.65383165584962,0.161766849947409,0.662524555381181,0.969750506270444,1.86391761218122,58.2633786052979,55.9222707191925,0,0,0,0,109.047585486711,91.5001205637253,5.90575454930463,55.4499581413362,48.3302214354325,87.6865548041344,82.9052854276242,1.01839363850316,1.61729061793121,0.758168275301024,16.6249066150314,0.650602214813519,0.229902104433473,0.900310649026746,0.90422890701429,1.7009124787832,1.92170580427275,2.24884138943349,16.815719098036,0,0,0,0,1.11218899690239,0.696504333044333,0.61734640922383,0.995171334092466,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.710234206755631,0.590292695242212,0.308534225774757,0,0.268273401399619,0.233530684734339,0.329119699826961,0.492502392237286,0.56748166682099,0.730999937126662,1.3173006917463,1.20785776884335,70.6574227175468,10.496270462687,0,0,0,0,0,0,0,0,0,0,0,1.1937388322469,0.779856348476481,0,1.08069024937347,0,0,0.228497025219458,0,0.407302655690628,0.193952487167626,0.140271639780637,0.316182685621286,0.295220295959204,0.627994911365499,0.370191491765402,0.889357881261447,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0.482443521363367,3.8798169934987,0.189491411770485,0,0,0,0,0.238043640886014,1.36593553500459,1.7339865851681,1.55025282754142,2.87018583583477,4.26044618260919,3.9717545829156,5.78596234326046,0,0,8.35999264132362,11.0374698521893,90.2294315731391,90.7218454223653,0,3.02965112645248,0,0.390438744296638,0,0,0,0,0,0.292255857911312,0.395287777946524,72.6186175113284,5.39372323791421,1.6025904330053,1.95464351224291,1.81467135269789,1.32745138339963,0.728341908464944,0.302323556964751,0.188605079755898,0.885905678642318,0.614870295887855,1.29214146584111,1.81766864738753,0,1.26414703174326,1.05418608574999,0,48.0019844112841,1.44048875225048,2.71653235943784,2.35770738534752,4.25616560741457,3.92411398724555,5.10101963866575,10.9607381681256,0.704015124191131,1.0591603543191,2.20528398054962,8.57408515295696,0,0.784068024066026,0.835606408021955,1.14898629821543,0,93.2689269112864,0,5.57244543500701,3.51869602002452,0.376736914009382,0,0.228778173206523,0,0,0,0,0,0.406638934253697,0,0,0,0,0.0826534557253359,0.523511883968059,0,6.83473244395618,0,0,0,0,0.129159823477731,0.675824501963113,1.40828686374905,0.39061315453185,0.209718688851422,0,2.01621004380506,1.58005560314089,0.202725215290164,0.205421914329655,0.389762468933385,0,0.198681354781265,0,0.147689527174577,0.201932899896295,0,0.100826185136841,0.779663045918019,0,0.116876902181569,4.98806843953465,0,0,0,5.21611903886914,4.129014459926,0.73260649706906,1.50057865355346,1.50471631210609,42.9211400388971,44.191222704689,49.8419096692275,37.8077001156113,65.7679218979817,45.323633843382,68.8522950236442,54.4888655901307,63.4399372577886,62.6489977219702,0.207574695168353,0.798049746802062,0.853668028770671,0.486213434136588,0.419226325255965,0.367687016900028,1.33348036680969,2.06035057238894,1.60459604795908,2.02157769411038,1.77435509923168,1.32038438970253,1.21733959710847,1.34452820050225,1.55075766180156,1.42888107384922,1.73826488917283,1.73618298417335,0.824171801606613,1.17759136107518,1.71434626192708,2.48466128623072,0.953744759789284,2.47088908274958,2.1645157495526,1.60767754994185,1.09756783723664,1.57841826862706,1.49384525230448,0.561142271657738,2.01679530811096,1.28055827088233,2.86461730218783,1.70430525304563,0.964533054905707,4.74640098082097,2.33931608445408,1.50409737833809,1.53030665655075,3.52946270591225,4.40548887678801
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,15.7330086779479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69434806608824,55.8144400333943,89.851648738399,125.018425104764,46.0555327147443,57.5010257459886,0,0,0,0,0,0,3.64169629547276,2.64495489636016,5.07065122804943,2.03306719241479,0.889294796111139,0,0.988866362566974,0,40.745615030503,89.9070834452438,1.97010263386108,2.43010688997043,2.10324961351382,36.8489769880907,35.5598350932098,3.42974237801871,2.49198224647415,3.67687514644008,110.115880999389,91.9348834213352,87.09490435629,2.90149833006426,3.65950574409639,2.08365348222704,91.0136576744502,105.799370685956,87.0950012327818,40.6587447953661,37.0166370077668,11.9295645328192,5.30083353332288,18.2127459857353,2.6087803983151,0,0,0,0,0,4.91555470461132,0,0,0,3.94361575374705,0,0,0,0,0,0,2.2836775943812,1.03575153458869,3.11728492036132,0.346970653532272,0.304465478312141,0.461230994512117,0.150722640552623,1.05829836422134,8.29399502775858,0.247194967734374,65.6481080416399,2.65383165584962,0.161766849947409,0.662524555381181,0.969750506270444,1.86391761218122,58.2633786052979,55.9222707191925,0,0,0,0,109.047585486711,91.5001205637253,5.90575454930463,55.4499581413362,48.3302214354325,87.6865548041344,82.9052854276242,1.01839363850316,1.61729061793121,0.758168275301024,16.6249066150314,0.650602214813519,0.229902104433473,0.900310649026746,0.90422890701429,1.7009124787832,1.92170580427275,2.24884138943349,16.815719098036,0,0,0,0,1.11218899690239,0.696504333044333,0.61734640922383,0.995171334092466,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.710234206755631,0.590292695242212,0.308534225774757,0,0.268273401399619,0.233530684734339,0.329119699826961,0.492502392237286,0.56748166682099,0.730999937126662,1.3173006917463,1.20785776884335,70.6574227175468,10.496270462687,0,0,0,0,0,0,0,0,0,0,0,1.1937388322469,0.779856348476481,0,1.08069024937347,0,0,0.228497025219458,0,0.407302655690628,0.193952487167626,0.140271639780637,0.316182685621286,0.295220295959204,0.627994911365499,0.370191491765402,0.889357881261447,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0.482443521363367,3.8798169934987,0.189491411770485,0,0,0,0,0.238043640886014,1.36593553500459,1.7339865851681,1.55025282754142,2.87018583583477,4.26044618260919,3.9717545829156,5.78596234326046,0,0,8.35999264132362,11.0374698521893,90.2294315731391,90.7218454223653,0,3.02965112645248,0,0.390438744296638,0,0,0,0,0,0.292255857911312,0.395287777946524,72.6186175113284,5.39372323791421,1.6025904330053,1.95464351224291,1.81467135269789,1.32745138339963,0.728341908464944,0.302323556964751,0.188605079755898,0.885905678642318,0.614870295887855,1.29214146584111,1.81766864738753,0,1.26414703174326,1.05418608574999,0,48.0019844112841,1.44048875225048,2.71653235943784,2.35770738534752,4.25616560741457,3.92411398724555,5.10101963866575,10.9607381681256,0.704015124191131,1.0591603543191,2.20528398054962,8.57408515295696,0,0.784068024066026,0.835606408021955,1.14898629821543,0,93.2689269112864,0,5.57244543500701,3.51869602002452,0.376736914009382,0,0.228778173206523,0,0,0,0,0,0.406638934253697,0,0,0,0,0.0826534557253359,0.523511883968059,0,6.83473244395618,0,0,0,0,0.129159823477731,0.675824501963113,1.40828686374905,0.39061315453185,0.209718688851422,0,2.01621004380506,1.58005560314089,0.202725215290164,0.205421914329655,0.389762468933385,0,0.198681354781265,0,0.147689527174577,0.201932899896295,0,0.100826185136841,0.779663045918019,0,0.116876902181569,4.98806843953465,0,0,0,5.21611903886914,4.129014459926,0.73260649706906,1.50057865355346,1.50471631210609,42.9211400388971,44.191222704689,49.8419096692275,37.8077001156113,65.7679218979817,45.323633843382,68.8522950236442,54.4888655901307,63.4399372577886,62.6489977219702,0.207574695168353,0.798049746802062,0.853668028770671,0.486213434136588,0.419226325255965,0.367687016900028,1.33348036680969,2.06035057238894,1.60459604795908,2.02157769411038,1.77435509923168,1.32038438970253,1.21733959710847,1.34452820050225,1.55075766180156,1.42888107384922,1.73826488917283,1.73618298417335,0.824171801606613,1.17759136107518,1.71434626192708,2.48466128623072,0.953744759789284,2.47088908274958,2.1645157495526,1.60767754994185,1.09756783723664,1.57841826862706,1.49384525230448,0.561142271657738,2.01679530811096,1.28055827088233,2.86461730218783,1.70430525304563,0.964533054905707,4.74640098082097,2.33931608445408,1.50409737833809,1.53030665655075,3.52946270591225,4.40548887678801
|short_description=p2@Ntrk2
}}
}}

Latest revision as of 20:03, 1 October 2015

Short description:p2@Ntrk2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ntrk2_5end
Coexpression cluster:MCL_coexpression_mm9:283
Association with transcript: 0bp_to_ENSMUST00000078541_5end
EntrezGene:Ntrk2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ntrk2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.73
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C255.81
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B889.85
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3125.02
Mouse Astrocytes, donor2.CNhs12078.11552-120C446.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C457.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.64
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C840.75
Mouse Microglia, donor2.CNhs12634.11736-123E889.91
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F136.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D535.56
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.43
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.49
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3110.12
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F391.93
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D787.09
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.90
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.66
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E491.01
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5105.80
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I687.10
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D640.66
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F637.02
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.93
Mouse Schwann, donor1.CNhs12507.11728-123D95.30
Mouse Schwann, donor2.CNhs12573.11746-123F918.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.92
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.94
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.28
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D73.12
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I38.29
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H165.65
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B258.26
cerebellum, neonate N30.CNhs11135.1395-42I255.92
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4109.05
corpus striatum, adult.CNhs10487.19-21D891.50
corpus striatum, neonate N00.CNhs11226.630-43F15.91
cortex, adult.CNhs10473.12-14D555.45
cortex, neonate N30.CNhs11107.1392-42F248.33
diencephalon, adult.CNhs10482.20-12F287.69
diencephalon, neonate N30.CNhs11201.1388-42B282.91
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G416.62
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G82.25
eyeball, neonate N16.CNhs11188.777-19A216.82
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E870.66
hippocampus, neonate N00.CNhs11228.627-43G110.50
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B13.88
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E62.87
lung, neonate N20.CNhs11109.822-18A44.26
lung, neonate N25.CNhs11119.1359-25C73.97
lung, neonate N30.CNhs11133.1394-42H25.79
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B68.36
mammary gland, adult pregnant day19.CNhs10476.588-5H211.04
medulla oblongata, adult.CNhs10477.17-12C290.23
medulla oblongata, neonate N30.CNhs11200.1396-42A390.72
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I972.62
ovary, adult.CNhs10507.91-2I75.39
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G848.00
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C72.72
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B94.26
pituitary gland, embryo E16.CNhs11036.449-43F63.92
pituitary gland, embryo E17.CNhs11039.1265-44F55.10
pituitary gland, neonate N00.CNhs11190.1308-22E910.96
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C38.57
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C993.27
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C15.57
spleen, embryo E18.CNhs11011.1271-21F23.52
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.78
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B44.99
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E45.22
uterus, adult pregnant day19.CNhs10497.590-15F54.13
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A142.92
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A244.19
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A349.84
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D737.81
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A465.77
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A545.32
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A668.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A754.49
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A863.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A962.65
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I54.75
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B44.41





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system9.17e-3454
nervous system7.61e-3375
ectoderm-derived structure9.76e-3395
ectoderm9.76e-3395
presumptive ectoderm9.76e-3395
neural tube6.89e-3252
neural rod6.89e-3252
future spinal cord6.89e-3252
neural keel6.89e-3252
central nervous system1.48e-3173
brain1.97e-2847
future brain1.97e-2847
regional part of brain1.38e-2746
neurectoderm3.16e-2764
neural plate3.16e-2764
presumptive neural plate3.16e-2764
ecto-epithelium3.45e-2773
anterior neural tube4.60e-2340
regional part of forebrain3.73e-2239
forebrain3.73e-2239
future forebrain3.73e-2239
pre-chordal neural plate3.84e-2149
gray matter1.54e-2034
brain grey matter1.75e-1729
regional part of telencephalon1.75e-1729
telencephalon1.75e-1729
structure with developmental contribution from neural crest4.30e-1792
cerebral cortex7.37e-1321
cerebral hemisphere7.37e-1321
pallium7.37e-1321
anatomical conduit2.06e-12122
regional part of cerebral cortex1.03e-1117
tube3.37e-10114
posterior neural tube4.16e-0912
chordal neural plate4.16e-0912
occipital lobe4.98e-0810
visual cortex4.98e-0810
neocortex4.98e-0810
adult organism1.48e-0751
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:58910044..58910113,%2B&oldid=4319798"