FFCP PHASE1:Mm9::chr11:60988483..60988512,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=216825 | |EntrezGene=216825 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |MCL_coexpression_id=22 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_ENSMUST00000174220_5end | |association_with_transcript=18bp_to_ENSMUST00000174220_5end | ||
|cluster_id=chr11:60988483..60988512,- | |||
|description=CAGE_peak_2_at_Usp22_5end | |description=CAGE_peak_2_at_Usp22_5end | ||
|id=chr11:60988483..60988512,- | |id=chr11:60988483..60988512,- | ||
|ontology_enrichment_celltype=CL:0000540!3.73e-19!33;CL:0000047!3.73e-19!33;CL:0000031!3.73e-19!33;CL:0000404!3.73e-19!33;CL:0000221!2.68e-15!44;CL:0000133!2.68e-15!44;CL:0002319!3.73e-15!43;CL:0000393!4.30e-15!39;CL:0000211!4.30e-15!39;CL:0000117!4.68e-15!23;CL:0000337!4.68e-15!23;CL:0000055!1.97e-11!50 | |ontology_enrichment_celltype=CL:0000540!3.73e-19!33;CL:0000047!3.73e-19!33;CL:0000031!3.73e-19!33;CL:0000404!3.73e-19!33;CL:0000221!2.68e-15!44;CL:0000133!2.68e-15!44;CL:0002319!3.73e-15!43;CL:0000393!4.30e-15!39;CL:0000211!4.30e-15!39;CL:0000117!4.68e-15!23;CL:0000337!4.68e-15!23;CL:0000055!1.97e-11!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.73e-19,33;CL:0000047,3.73e-19,33;CL:0000031,3.73e-19,33;CL:0000404,3.73e-19,33;CL:0000221,2.68e-15,44;CL:0000133,2.68e-15,44;CL:0002319,3.73e-15,43;CL:0000393,4.30e-15,39;CL:0000211,4.30e-15,39;CL:0000117,4.68e-15,23;CL:0000337,4.68e-15,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.48e-25!73;UBERON:0005743!9.48e-25!73;UBERON:0000073!1.35e-24!75;UBERON:0001016!1.35e-24!75;UBERON:0004121!2.58e-21!102;UBERON:0000924!2.58e-21!102;UBERON:0006601!2.58e-21!102;UBERON:0002346!4.95e-18!71;UBERON:0003075!4.95e-18!71;UBERON:0007284!4.95e-18!71;UBERON:0001049!7.29e-17!52;UBERON:0005068!7.29e-17!52;UBERON:0006241!7.29e-17!52;UBERON:0007135!7.29e-17!52;UBERON:0003056!3.00e-16!49;UBERON:0002020!4.05e-16!34;UBERON:0000033!4.15e-16!63;UBERON:0000955!2.69e-15!50;UBERON:0006238!2.69e-15!50;UBERON:0002616!3.96e-15!49;UBERON:0000153!6.23e-15!94;UBERON:0003080!2.18e-14!40;UBERON:0002780!4.70e-14!39;UBERON:0001890!4.70e-14!39;UBERON:0006240!4.70e-14!39;UBERON:0007811!4.94e-13!86;UBERON:0002791!5.32e-13!29;UBERON:0003528!5.32e-13!29;UBERON:0001893!5.32e-13!29;UBERON:0000956!1.27e-08!21;UBERON:0001869!1.27e-08!21;UBERON:0000203!1.27e-08!21 | |ontology_enrichment_uberon=UBERON:0001017!9.48e-25!73;UBERON:0005743!9.48e-25!73;UBERON:0000073!1.35e-24!75;UBERON:0001016!1.35e-24!75;UBERON:0004121!2.58e-21!102;UBERON:0000924!2.58e-21!102;UBERON:0006601!2.58e-21!102;UBERON:0002346!4.95e-18!71;UBERON:0003075!4.95e-18!71;UBERON:0007284!4.95e-18!71;UBERON:0001049!7.29e-17!52;UBERON:0005068!7.29e-17!52;UBERON:0006241!7.29e-17!52;UBERON:0007135!7.29e-17!52;UBERON:0003056!3.00e-16!49;UBERON:0002020!4.05e-16!34;UBERON:0000033!4.15e-16!63;UBERON:0000955!2.69e-15!50;UBERON:0006238!2.69e-15!50;UBERON:0002616!3.96e-15!49;UBERON:0000153!6.23e-15!94;UBERON:0003080!2.18e-14!40;UBERON:0002780!4.70e-14!39;UBERON:0001890!4.70e-14!39;UBERON:0006240!4.70e-14!39;UBERON:0007811!4.94e-13!86;UBERON:0002791!5.32e-13!29;UBERON:0003528!5.32e-13!29;UBERON:0001893!5.32e-13!29;UBERON:0000956!1.27e-08!21;UBERON:0001869!1.27e-08!21;UBERON:0000203!1.27e-08!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.48e-25,73;UBERON:0001016,1.35e-24,75;UBERON:0004121,5.54e-23,95;UBERON:0000924,5.54e-23,95;UBERON:0006601,5.54e-23,95;UBERON:0002346,3.32e-20,64;UBERON:0003075,3.32e-20,64;UBERON:0007284,3.32e-20,64;UBERON:0010371,1.83e-18,73;UBERON:0000073,3.27e-18,54;UBERON:0001049,7.29e-17,52;UBERON:0005068,7.29e-17,52;UBERON:0006241,7.29e-17,52;UBERON:0007135,7.29e-17,52;UBERON:0003056,3.00e-16,49;UBERON:0002020,4.05e-16,34;UBERON:0003080,2.18e-14,40;UBERON:0002780,4.70e-14,39;UBERON:0001890,4.70e-14,39;UBERON:0006240,4.70e-14,39;UBERON:0000955,8.47e-14,47;UBERON:0006238,8.47e-14,47;UBERON:0002616,1.24e-13,46;UBERON:0003528,5.32e-13,29;UBERON:0002791,5.32e-13,29;UBERON:0001893,5.32e-13,29;UBERON:0010314,3.66e-11,92;UBERON:0000956,1.27e-08,21;UBERON:0001869,1.27e-08,21;UBERON:0000203,1.27e-08,21 | |||
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| ||
|short_description=p2@Usp22 | |short_description=p2@Usp22 | ||
}} | }} |
Latest revision as of 20:22, 1 October 2015
Short description: | p2@Usp22 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Usp22_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 18bp_to_ENSMUST00000174220_5end |
EntrezGene: | Usp22 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.73e-19 | 33 |
neuronal stem cell | 3.73e-19 | 33 |
neuroblast | 3.73e-19 | 33 |
electrically signaling cell | 3.73e-19 | 33 |
ectodermal cell | 2.68e-15 | 44 |
neurectodermal cell | 2.68e-15 | 44 |
neural cell | 3.73e-15 | 43 |
electrically responsive cell | 4.30e-15 | 39 |
electrically active cell | 4.30e-15 | 39 |
CNS neuron (sensu Vertebrata) | 4.68e-15 | 23 |
neuroblast (sensu Vertebrata) | 4.68e-15 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 9.48e-25 | 73 |
nervous system | 1.35e-24 | 75 |
ectoderm-derived structure | 5.54e-23 | 95 |
ectoderm | 5.54e-23 | 95 |
presumptive ectoderm | 5.54e-23 | 95 |
neurectoderm | 3.32e-20 | 64 |
neural plate | 3.32e-20 | 64 |
presumptive neural plate | 3.32e-20 | 64 |
ecto-epithelium | 1.83e-18 | 73 |
regional part of nervous system | 3.27e-18 | 54 |
neural tube | 7.29e-17 | 52 |
neural rod | 7.29e-17 | 52 |
future spinal cord | 7.29e-17 | 52 |
neural keel | 7.29e-17 | 52 |
pre-chordal neural plate | 3.00e-16 | 49 |
gray matter | 4.05e-16 | 34 |
anterior neural tube | 2.18e-14 | 40 |
regional part of forebrain | 4.70e-14 | 39 |
forebrain | 4.70e-14 | 39 |
future forebrain | 4.70e-14 | 39 |
brain | 8.47e-14 | 47 |
future brain | 8.47e-14 | 47 |
regional part of brain | 1.24e-13 | 46 |
brain grey matter | 5.32e-13 | 29 |
regional part of telencephalon | 5.32e-13 | 29 |
telencephalon | 5.32e-13 | 29 |
structure with developmental contribution from neural crest | 3.66e-11 | 92 |
cerebral cortex | 1.27e-08 | 21 |
cerebral hemisphere | 1.27e-08 | 21 |
pallium | 1.27e-08 | 21 |