FFCP PHASE1:Mm9::chr19:10463489..10463553,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54525 | |EntrezGene=54525 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=Q9R0N7,Q8CF96,E9PZA8,Q0D2K7,Q8CF95 | |UniProt=Q9R0N7,Q8CF96,E9PZA8,Q0D2K7,Q8CF95 | ||
|association_with_transcript=-26bp_to_ENSMUST00000073899,ENSMUST00000076968,ENSMUST00000169121,NM_018801,NM_173067,NM_173068,uc008gpp.2,uc008gpq.2,uc012bin.1_5end | |association_with_transcript=-26bp_to_ENSMUST00000073899,ENSMUST00000076968,ENSMUST00000169121,NM_018801,NM_173067,NM_173068,uc008gpp.2,uc008gpq.2,uc012bin.1_5end | ||
|cluster_id=chr19:10463489..10463553,+ | |||
|description=CAGE_peak_1_at_Syt7_5end | |description=CAGE_peak_1_at_Syt7_5end | ||
|id=chr19:10463489..10463553,+ | |id=chr19:10463489..10463553,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.37e-13!33;CL:0000047!1.37e-13!33;CL:0000031!1.37e-13!33;CL:0000404!1.37e-13!33;CL:0000117!8.34e-12!23;CL:0000337!8.34e-12!23;CL:0000393!7.57e-09!39;CL:0000211!7.57e-09!39;CL:0000221!8.73e-08!44;CL:0000133!8.73e-08!44;CL:0002319!8.89e-08!43 | |ontology_enrichment_celltype=CL:0000540!1.37e-13!33;CL:0000047!1.37e-13!33;CL:0000031!1.37e-13!33;CL:0000404!1.37e-13!33;CL:0000117!8.34e-12!23;CL:0000337!8.34e-12!23;CL:0000393!7.57e-09!39;CL:0000211!7.57e-09!39;CL:0000221!8.73e-08!44;CL:0000133!8.73e-08!44;CL:0002319!8.89e-08!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,9.38e-14,33;CL:0000047,9.38e-14,33;CL:0000031,9.38e-14,33;CL:0000404,9.38e-14,33;CL:0000117,6.05e-12,23;CL:0000337,6.05e-12,23;CL:0000393,1.81e-08,39;CL:0000211,1.81e-08,39;CL:0000221,9.71e-08,44;CL:0000133,9.71e-08,44;CL:0002319,9.92e-08,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.64e-24!73;UBERON:0005743!2.64e-24!73;UBERON:0000073!7.95e-24!75;UBERON:0001016!7.95e-24!75;UBERON:0004121!2.94e-22!102;UBERON:0000924!2.94e-22!102;UBERON:0006601!2.94e-22!102;UBERON:0002346!5.83e-22!71;UBERON:0003075!5.83e-22!71;UBERON:0007284!5.83e-22!71;UBERON:0001049!7.57e-21!52;UBERON:0005068!7.57e-21!52;UBERON:0006241!7.57e-21!52;UBERON:0007135!7.57e-21!52;UBERON:0000955!4.35e-20!50;UBERON:0006238!4.35e-20!50;UBERON:0002616!1.89e-19!49;UBERON:0000033!1.15e-18!63;UBERON:0003080!1.33e-16!40;UBERON:0002780!5.14e-16!39;UBERON:0001890!5.14e-16!39;UBERON:0006240!5.14e-16!39;UBERON:0003056!6.14e-16!49;UBERON:0002020!1.11e-15!34;UBERON:0002791!3.57e-13!29;UBERON:0003528!3.57e-13!29;UBERON:0001893!3.57e-13!29;UBERON:0000956!3.88e-09!21;UBERON:0001869!3.88e-09!21;UBERON:0000203!3.88e-09!21;UBERON:0000468!2.44e-08!333;UBERON:0002021!5.61e-08!10;UBERON:0000411!5.61e-08!10;UBERON:0001950!5.61e-08!10;UBERON:0002619!1.46e-07!17;UBERON:0004111!7.72e-07!122 | |ontology_enrichment_uberon=UBERON:0001017!2.64e-24!73;UBERON:0005743!2.64e-24!73;UBERON:0000073!7.95e-24!75;UBERON:0001016!7.95e-24!75;UBERON:0004121!2.94e-22!102;UBERON:0000924!2.94e-22!102;UBERON:0006601!2.94e-22!102;UBERON:0002346!5.83e-22!71;UBERON:0003075!5.83e-22!71;UBERON:0007284!5.83e-22!71;UBERON:0001049!7.57e-21!52;UBERON:0005068!7.57e-21!52;UBERON:0006241!7.57e-21!52;UBERON:0007135!7.57e-21!52;UBERON:0000955!4.35e-20!50;UBERON:0006238!4.35e-20!50;UBERON:0002616!1.89e-19!49;UBERON:0000033!1.15e-18!63;UBERON:0003080!1.33e-16!40;UBERON:0002780!5.14e-16!39;UBERON:0001890!5.14e-16!39;UBERON:0006240!5.14e-16!39;UBERON:0003056!6.14e-16!49;UBERON:0002020!1.11e-15!34;UBERON:0002791!3.57e-13!29;UBERON:0003528!3.57e-13!29;UBERON:0001893!3.57e-13!29;UBERON:0000956!3.88e-09!21;UBERON:0001869!3.88e-09!21;UBERON:0000203!3.88e-09!21;UBERON:0000468!2.44e-08!333;UBERON:0002021!5.61e-08!10;UBERON:0000411!5.61e-08!10;UBERON:0001950!5.61e-08!10;UBERON:0002619!1.46e-07!17;UBERON:0004111!7.72e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.06e-24,73;UBERON:0001016,6.23e-24,75;UBERON:0000073,3.08e-22,54;UBERON:0004121,2.52e-21,95;UBERON:0000924,2.52e-21,95;UBERON:0006601,2.52e-21,95;UBERON:0002346,2.61e-21,64;UBERON:0003075,2.61e-21,64;UBERON:0007284,2.61e-21,64;UBERON:0001049,6.42e-21,52;UBERON:0005068,6.42e-21,52;UBERON:0006241,6.42e-21,52;UBERON:0007135,6.42e-21,52;UBERON:0010314,5.61e-20,92;UBERON:0010371,2.46e-19,73;UBERON:0000955,3.12e-18,47;UBERON:0006238,3.12e-18,47;UBERON:0002616,1.33e-17,46;UBERON:0003080,1.09e-16,40;UBERON:0002780,4.29e-16,39;UBERON:0001890,4.29e-16,39;UBERON:0006240,4.29e-16,39;UBERON:0003056,5.00e-16,49;UBERON:0002020,9.51e-16,34;UBERON:0003528,3.28e-13,29;UBERON:0002791,3.28e-13,29;UBERON:0001893,3.28e-13,29;UBERON:0000956,3.98e-09,21;UBERON:0001869,3.98e-09,21;UBERON:0000203,3.98e-09,21;UBERON:0002021,4.58e-08,10;UBERON:0000411,4.58e-08,10;UBERON:0001950,4.58e-08,10;UBERON:0002619,1.57e-07,17 | |||
|phase1_expression=6.24580503708696,15.3549179361319,18.1999695755814,1.81478526784098,1.00179145989269,8.72972213941827,14.9512089981136,0,0,0,0.171217968225505,0.0797721589953364,0,0,0,0.202475267389826,0,0,0,0,23.216818211242,0,0,10.239515058778,11.4704640533585,11.4846392823004,10.3382879078178,14.2211013572687,3.42042155021473,1.26015064879965,5.32153225572731,0,0,0,0.577703239502549,0.332469290716985,0,0,0,0,0,0,0,0.503587271902309,0.101376931219515,0.917733760808408,3.12956537739216,0.218025156380447,0.878744730937887,0,0.419959264876088,0,0,0,0,0.514518872071894,0,0.515672092277442,39.249393406762,30.1524858185059,51.3403436840005,3.38844532069132,0.889294796111139,0,0.988866362566974,0,1.19840044207362,2.30530983192933,17.3161652555158,18.6308194897733,17.2466468308133,46.2754594734162,34.0137553065485,15.1888591026543,15.6228117759725,31.2534387447407,47.3498288297371,80.5707103317534,80.7970364927841,50.2486756252039,56.1734131718795,55.2168172790166,52.4864038122596,23.0732670112989,37.7411672008721,47.1405736757868,47.2673980253022,29.6375118862228,4.54357159999104,5.13886608726142,40.5810284182349,0,0,1.07940638327563,0,0.896053774194671,3.5111105032938,0,0,0,6.61964072950398,0,0,0,0.216491041011214,1.01343946190039,0,3.9964357901671,0.517875767294343,17.2192881315197,7.45986905094384,6.69824052286711,8.76338889573022,8.13902258984162,11.4061045921634,6.6603293404728,1.48316980640624,9.39895819979426,0,3.88240439873782,2.42925670306433,0.484875253135222,22.3670113461747,103.937182939099,79.5897485891129,4.08731288333746,0,0,0.254140454146129,56.620861695023,55.3575729410538,33.2984033099091,97.8630922682516,88.7332636936247,64.4142938134636,63.9230576486965,3.25885964321012,1.36847667671102,0.758168275301024,5.89237196482127,4.81445638962004,1.83921683546778,6.48223667299257,6.32960234910003,10.8178033650611,10.7615525039274,9.93238280333126,10.3481348295606,2.58681591519411,2.08016688184601,1.93546236580344,2.6303487891309,4.72680323683516,5.2237824978325,4.93877127379064,6.36909653819178,0,0,0.284163499395593,2.48550927042602,2.57978665979206,3.24111710629827,5.68187365404505,3.14822770795846,3.23960937063494,6.74348439776183,8.31647544338819,5.25444040652263,12.1774288935976,14.9392392311977,23.7531611969357,19.5907983149945,29.6392655642918,24.1571553768669,89.5835180883182,35.6049958832324,2.64335026387038,1.85115396664481,8.74481827194459,9.52170354627798,6.18563814346048,5.84882221407693,6.67134131534611,4.37518940058886,1.89811624617805,3.12928013975621,4.27269854960458,2.78539060857611,4.09424582950152,5.39291645192533,3.6743468478698,5.17767310461355,7.96605184002943,5.9409226557059,7.88954149711563,5.09128319613286,3.49114476901726,3.85747009396752,2.97211724484009,4.42830443938806,2.82597710114475,1.72756029490521,1.1858105083486,2.33583148002532,1.76903095601883,1.34917267430912,1.21716072833102,0,0,0.863088412352432,0.324270453550071,0.274561413188081,4.31304619582064,0.744281895337007,2.80833905803104,0.757736633841335,0.896987067609561,1.4473305640901,8.12914036733061,4.16881105895066,7.17045896344914,4.92260748748046,6.57132695207806,3.35012514883632,2.38043640886014,5.07347484430277,3.94087860265477,3.5434350343804,3.82691444777969,5.89907932976657,5.87128938344045,5.78596234326046,1.50791283939272,0.54390568381871,0,3.03530420935206,64.059685405129,50.0493901748708,0,2.01976741763498,14.8288863125641,14.4462335389756,11.4174400798383,11.2315335037699,17.1554979043443,29.7230357328274,8.90583543684768,11.6902343164525,11.0680577825027,67.4774764485795,18.5941511622832,4.62970569534864,6.18970445543589,6.76377504187395,5.30980553359851,5.82673526771955,6.04647113929502,1.50884063804718,4.72483028609236,6.14870295887855,3.10113951801865,2.18120237686503,4.27796854061666,2.21225730555071,0,0,38.469675450178,4.32146625675145,5.04498866752743,10.7168517515796,20.2167866352192,25.8634785523002,33.8970982440369,29.2286351150015,1.64270195644597,0.847328283455281,77.1849393192367,9.56340267060584,2.09903754704677,3.61877549568935,5.61050016814741,13.9519764783302,2.91480836629851,66.938534025794,0.512612642393558,3.30218988741156,3.1483069652851,0,0.410082683163076,0.228778173206523,0,0,0.138199973804424,6.68269432610579,4.9032079005076,5.48962561242491,4.10420295122845,3.3454127362315,3.9305261474312,3.2367443132357,2.72756403893609,3.40282724579238,13.9984171155136,1.24267862617385,17.4744810992099,17.9419855252775,14.0639716888533,20.8062771528131,18.0823752868824,19.0920421804579,19.3639443765494,18.0984094933091,28.3120229949419,23.4336597201226,26.2107305694658,0,0.810900861160657,1.1298205288131,0.389762468933385,1.07416017400489,0.39736270956253,0.721172697119813,0.590758108698309,0.302899349844443,0.0762068066549998,0.302478555410522,1.07203668813728,0.288635524920988,0.467507608726276,6.34845074122592,6.88156455459601,14.0850754876877,9.73730774911655,2.70465431645067,1.31377732815827,2.38097111547445,1.07184189539533,13.5424468089548,99.3963243006037,95.2873239569856,100.8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| |phase1_expression=6.24580503708696,15.3549179361319,18.1999695755814,1.81478526784098,1.00179145989269,8.72972213941827,14.9512089981136,0,0,0,0.171217968225505,0.0797721589953364,0,0,0,0.202475267389826,0,0,0,0,23.216818211242,0,0,10.239515058778,11.4704640533585,11.4846392823004,10.3382879078178,14.2211013572687,3.42042155021473,1.26015064879965,5.32153225572731,0,0,0,0.577703239502549,0.332469290716985,0,0,0,0,0,0,0,0.503587271902309,0.101376931219515,0.917733760808408,3.12956537739216,0.218025156380447,0.878744730937887,0,0.419959264876088,0,0,0,0,0.514518872071894,0,0.515672092277442,39.249393406762,30.1524858185059,51.3403436840005,3.38844532069132,0.889294796111139,0,0.988866362566974,0,1.19840044207362,2.30530983192933,17.3161652555158,18.6308194897733,17.2466468308133,46.2754594734162,34.0137553065485,15.1888591026543,15.6228117759725,31.2534387447407,47.3498288297371,80.5707103317534,80.7970364927841,50.2486756252039,56.1734131718795,55.2168172790166,52.4864038122596,23.0732670112989,37.7411672008721,47.1405736757868,47.2673980253022,29.6375118862228,4.54357159999104,5.13886608726142,40.5810284182349,0,0,1.07940638327563,0,0.896053774194671,3.5111105032938,0,0,0,6.61964072950398,0,0,0,0.216491041011214,1.01343946190039,0,3.9964357901671,0.517875767294343,17.2192881315197,7.45986905094384,6.69824052286711,8.76338889573022,8.13902258984162,11.4061045921634,6.6603293404728,1.48316980640624,9.39895819979426,0,3.88240439873782,2.42925670306433,0.484875253135222,22.3670113461747,103.937182939099,79.5897485891129,4.08731288333746,0,0,0.254140454146129,56.620861695023,55.3575729410538,33.2984033099091,97.8630922682516,88.7332636936247,64.4142938134636,63.9230576486965,3.25885964321012,1.36847667671102,0.758168275301024,5.89237196482127,4.81445638962004,1.83921683546778,6.48223667299257,6.32960234910003,10.8178033650611,10.7615525039274,9.93238280333126,10.3481348295606,2.58681591519411,2.08016688184601,1.93546236580344,2.6303487891309,4.72680323683516,5.2237824978325,4.93877127379064,6.36909653819178,0,0,0.284163499395593,2.48550927042602,2.57978665979206,3.24111710629827,5.68187365404505,3.14822770795846,3.23960937063494,6.74348439776183,8.31647544338819,5.25444040652263,12.1774288935976,14.9392392311977,23.7531611969357,19.5907983149945,29.6392655642918,24.1571553768669,89.5835180883182,35.6049958832324,2.64335026387038,1.85115396664481,8.74481827194459,9.52170354627798,6.18563814346048,5.84882221407693,6.67134131534611,4.37518940058886,1.89811624617805,3.12928013975621,4.27269854960458,2.78539060857611,4.09424582950152,5.39291645192533,3.6743468478698,5.17767310461355,7.96605184002943,5.9409226557059,7.88954149711563,5.09128319613286,3.49114476901726,3.85747009396752,2.97211724484009,4.42830443938806,2.82597710114475,1.72756029490521,1.1858105083486,2.33583148002532,1.76903095601883,1.34917267430912,1.21716072833102,0,0,0.863088412352432,0.324270453550071,0.274561413188081,4.31304619582064,0.744281895337007,2.80833905803104,0.757736633841335,0.896987067609561,1.4473305640901,8.12914036733061,4.16881105895066,7.17045896344914,4.92260748748046,6.57132695207806,3.35012514883632,2.38043640886014,5.07347484430277,3.94087860265477,3.5434350343804,3.82691444777969,5.89907932976657,5.87128938344045,5.78596234326046,1.50791283939272,0.54390568381871,0,3.03530420935206,64.059685405129,50.0493901748708,0,2.01976741763498,14.8288863125641,14.4462335389756,11.4174400798383,11.2315335037699,17.1554979043443,29.7230357328274,8.90583543684768,11.6902343164525,11.0680577825027,67.4774764485795,18.5941511622832,4.62970569534864,6.18970445543589,6.76377504187395,5.30980553359851,5.82673526771955,6.04647113929502,1.50884063804718,4.72483028609236,6.14870295887855,3.10113951801865,2.18120237686503,4.27796854061666,2.21225730555071,0,0,38.469675450178,4.32146625675145,5.04498866752743,10.7168517515796,20.2167866352192,25.8634785523002,33.8970982440369,29.2286351150015,1.64270195644597,0.847328283455281,77.1849393192367,9.56340267060584,2.09903754704677,3.61877549568935,5.61050016814741,13.9519764783302,2.91480836629851,66.938534025794,0.512612642393558,3.30218988741156,3.1483069652851,0,0.410082683163076,0.228778173206523,0,0,0.138199973804424,6.68269432610579,4.9032079005076,5.48962561242491,4.10420295122845,3.3454127362315,3.9305261474312,3.2367443132357,2.72756403893609,3.40282724579238,13.9984171155136,1.24267862617385,17.4744810992099,17.9419855252775,14.0639716888533,20.8062771528131,18.0823752868824,19.0920421804579,19.3639443765494,18.0984094933091,28.3120229949419,23.4336597201226,26.2107305694658,0,0.810900861160657,1.1298205288131,0.389762468933385,1.07416017400489,0.39736270956253,0.721172697119813,0.590758108698309,0.302899349844443,0.0762068066549998,0.302478555410522,1.07203668813728,0.288635524920988,0.467507608726276,6.34845074122592,6.88156455459601,14.0850754876877,9.73730774911655,2.70465431645067,1.31377732815827,2.38097111547445,1.07184189539533,13.5424468089548,99.3963243006037,95.2873239569856,100.8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| ||
|short_description=p1@Syt7 | |short_description=p1@Syt7 | ||
}} | }} |
Latest revision as of 20:30, 1 October 2015
Short description: | p1@Syt7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Syt7_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -26bp_to_ENSMUST00000073899, ENSMUST00000076968, ENSMUST00000169121, NM_018801, NM_173067, NM_173068, uc008gpp.2, uc008gpq.2, uc012bin.1_5end |
EntrezGene: | Syt7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 9.38e-14 | 33 |
neuronal stem cell | 9.38e-14 | 33 |
neuroblast | 9.38e-14 | 33 |
electrically signaling cell | 9.38e-14 | 33 |
CNS neuron (sensu Vertebrata) | 6.05e-12 | 23 |
neuroblast (sensu Vertebrata) | 6.05e-12 | 23 |
electrically responsive cell | 1.81e-08 | 39 |
electrically active cell | 1.81e-08 | 39 |
ectodermal cell | 9.71e-08 | 44 |
neurectodermal cell | 9.71e-08 | 44 |
neural cell | 9.92e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.06e-24 | 73 |
nervous system | 6.23e-24 | 75 |
regional part of nervous system | 3.08e-22 | 54 |
ectoderm-derived structure | 2.52e-21 | 95 |
ectoderm | 2.52e-21 | 95 |
presumptive ectoderm | 2.52e-21 | 95 |
neurectoderm | 2.61e-21 | 64 |
neural plate | 2.61e-21 | 64 |
presumptive neural plate | 2.61e-21 | 64 |
neural tube | 6.42e-21 | 52 |
neural rod | 6.42e-21 | 52 |
future spinal cord | 6.42e-21 | 52 |
neural keel | 6.42e-21 | 52 |
structure with developmental contribution from neural crest | 5.61e-20 | 92 |
ecto-epithelium | 2.46e-19 | 73 |
brain | 3.12e-18 | 47 |
future brain | 3.12e-18 | 47 |
regional part of brain | 1.33e-17 | 46 |
anterior neural tube | 1.09e-16 | 40 |
regional part of forebrain | 4.29e-16 | 39 |
forebrain | 4.29e-16 | 39 |
future forebrain | 4.29e-16 | 39 |
pre-chordal neural plate | 5.00e-16 | 49 |
gray matter | 9.51e-16 | 34 |
brain grey matter | 3.28e-13 | 29 |
regional part of telencephalon | 3.28e-13 | 29 |
telencephalon | 3.28e-13 | 29 |
cerebral cortex | 3.98e-09 | 21 |
cerebral hemisphere | 3.98e-09 | 21 |
pallium | 3.98e-09 | 21 |
occipital lobe | 4.58e-08 | 10 |
visual cortex | 4.58e-08 | 10 |
neocortex | 4.58e-08 | 10 |
regional part of cerebral cortex | 1.57e-07 | 17 |