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FFCP PHASE1:Mm9::chr19:10463760..10463781,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr19:10463760..10463781,+
|DHSsupport=NA
|short_description=p3@Syt7
|DPIdataset=NA
|description=CAGE_peak_3_at_Syt7_5end
|association_with_transcript=180bp_to_ENSMUST00000073899,ENSMUST00000076968,ENSMUST00000169121,NM_018801,NM_173067,NM_173068,uc008gpp.2,uc008gpq.2,uc012bin.1_5end
|EntrezGene=54525
|EntrezGene=54525
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9R0N7,Q8CF96,E9PZA8,Q0D2K7,Q8CF95
|UniProt=Q9R0N7,Q8CF96,E9PZA8,Q0D2K7,Q8CF95
|association_with_transcript=180bp_to_ENSMUST00000073899,ENSMUST00000076968,ENSMUST00000169121,NM_018801,NM_173067,NM_173068,uc008gpp.2,uc008gpq.2,uc012bin.1_5end
|cluster_id=chr19:10463760..10463781,+
|description=CAGE_peak_3_at_Syt7_5end
|id=chr19:10463760..10463781,+
|ontology_enrichment_celltype=CL:0000117!1.12e-13!23;CL:0000337!1.12e-13!23;CL:0000540!1.38e-11!33;CL:0000047!1.38e-11!33;CL:0000031!1.38e-11!33;CL:0000404!1.38e-11!33;CL:0000393!9.89e-08!39;CL:0000211!9.89e-08!39;CL:0000221!1.02e-07!44;CL:0000133!1.02e-07!44;CL:0002319!1.93e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,2.16e-21,23;CL:0000337,2.16e-21,23;CL:0000540,4.33e-14,33;CL:0000047,4.33e-14,33;CL:0000031,4.33e-14,33;CL:0000404,4.33e-14,33;CL:0000393,7.25e-11,39;CL:0000211,7.25e-11,39;CL:0002319,3.04e-09,43;CL:0000221,6.90e-09,44;CL:0000133,6.90e-09,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!7.57e-23!75;UBERON:0001016!7.57e-23!75;UBERON:0001017!1.14e-22!73;UBERON:0005743!1.14e-22!73;UBERON:0002346!6.82e-22!71;UBERON:0003075!6.82e-22!71;UBERON:0007284!6.82e-22!71;UBERON:0001049!1.17e-21!52;UBERON:0005068!1.17e-21!52;UBERON:0006241!1.17e-21!52;UBERON:0007135!1.17e-21!52;UBERON:0004121!1.57e-21!102;UBERON:0000924!1.57e-21!102;UBERON:0006601!1.57e-21!102;UBERON:0000033!7.44e-21!63;UBERON:0000955!7.67e-21!50;UBERON:0006238!7.67e-21!50;UBERON:0002616!3.67e-20!49;UBERON:0002020!2.71e-18!34;UBERON:0003056!4.14e-18!49;UBERON:0003080!2.94e-17!40;UBERON:0002780!1.20e-16!39;UBERON:0001890!1.20e-16!39;UBERON:0006240!1.20e-16!39;UBERON:0002791!2.91e-15!29;UBERON:0003528!2.91e-15!29;UBERON:0001893!2.91e-15!29;UBERON:0000956!1.66e-10!21;UBERON:0001869!1.66e-10!21;UBERON:0000203!1.66e-10!21;UBERON:0007811!3.45e-09!86;UBERON:0002021!1.19e-08!10;UBERON:0000411!1.19e-08!10;UBERON:0001950!1.19e-08!10;UBERON:0002619!1.48e-08!17;UBERON:0000153!1.12e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.23e-42,54;UBERON:0001049,2.48e-39,52;UBERON:0005068,2.48e-39,52;UBERON:0006241,2.48e-39,52;UBERON:0007135,2.48e-39,52;UBERON:0001017,2.70e-37,73;UBERON:0001016,7.27e-36,75;UBERON:0002346,9.84e-36,64;UBERON:0003075,9.84e-36,64;UBERON:0007284,9.84e-36,64;UBERON:0000955,7.74e-34,47;UBERON:0006238,7.74e-34,47;UBERON:0002616,1.22e-32,46;UBERON:0002020,4.86e-31,34;UBERON:0003080,3.78e-30,40;UBERON:0004121,5.09e-30,95;UBERON:0000924,5.09e-30,95;UBERON:0006601,5.09e-30,95;UBERON:0010371,1.87e-29,73;UBERON:0002780,4.70e-29,39;UBERON:0001890,4.70e-29,39;UBERON:0006240,4.70e-29,39;UBERON:0003056,6.54e-29,49;UBERON:0010314,9.64e-26,92;UBERON:0003528,1.21e-25,29;UBERON:0002791,1.21e-25,29;UBERON:0001893,1.21e-25,29;UBERON:0000956,3.33e-17,21;UBERON:0001869,3.33e-17,21;UBERON:0000203,3.33e-17,21;UBERON:0002021,3.90e-14,10;UBERON:0000411,3.90e-14,10;UBERON:0001950,3.90e-14,10;UBERON:0002619,9.42e-14,17;UBERON:0000025,1.71e-13,114;UBERON:0004111,3.78e-13,122;UBERON:0002420,1.34e-09,8;UBERON:0007245,1.34e-09,8;UBERON:0010009,1.34e-09,8;UBERON:0010011,1.34e-09,8;UBERON:0000454,1.34e-09,8;UBERON:0003076,3.63e-09,12;UBERON:0003057,3.63e-09,12;UBERON:0002240,2.05e-07,6;UBERON:0005174,2.05e-07,6;UBERON:0001137,2.05e-07,6;UBERON:0000483,3.48e-07,174;UBERON:0000119,6.03e-07,176
|phase1_expression=0.80074423552397,0.697950815278722,0.909998478779072,0,0,1.17515490338323,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,0.159992422793407,0.45881856213434,0.57423196411502,1.29228598847722,0.430942465371778,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24864567805155,4.23192783417626,3.1691570175309,0,0,0,0,0,0.299600110518405,0,1.45165457231869,1.62007125998029,1.26194976810829,4.85606673486466,3.75476519617743,1.46988959057945,1.53352753629178,0.919218786610021,14.3150645299205,19.4084753889485,12.1349161272432,5.01167893374737,5.58074625974699,6.77187381723788,8.09630697104005,5.6276261003168,5.95913166329559,6.18720029494702,6.40672563595963,6.33758115806022,0.454357159999104,0.302286240427142,3.47837386442013,0,0,0,0,0,1.12355536105401,0,0,0,0.985903938436763,0,0,0,0,0,0,0.34255163915718,0,1.1875371125186,0,0,0.461230994512117,0.452167921657868,0.23517741427141,1.38233250462643,0,0.144599356919912,0,0.323533699894818,0,0,0,9.36898550436951,6.70229461803056,0.766371165625774,0,0,0,5.99162557619291,12.3525162761029,3.01570445070875,17.9039049798045,17.6443665557928,12.4672826735736,13.9527486238272,0.203678727700633,0,0,0.841767423545896,0.130120442962704,0,0.180062129805349,0.452114453507145,1.42876648217788,2.17793324484245,1.59292931751539,1.55222022443409,0,0,0.175951124163949,0,0.278047249225598,0,0.411564272815887,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0.350296027101508,0.987359099480883,0.32833492815819,1.21603214318784,1.31579988682799,1.3173006917463,0.939444931322602,17.8746456279508,3.39585220851639,0,0,0.426576501070468,0,0.128867461322093,0.201683524623343,0.444756087689741,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0,0,0,0,0.189667900953082,0.342745537829186,0,0,0.193952487167626,0.140271639780637,0.126473074248515,0.147610147979602,0.156998727841375,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0.585400943573396,0,0,0,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,4.33486592967038,6.09500770279457,0,0,0.631016438832513,0.780877488593277,0,0.238968797952552,0.222798674082394,1.41538265394416,0,0.584511715822624,0,8.03303291054518,0.283880170416537,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0.295301892880773,0.922305443831782,0.516856586336442,0,0.712994756769443,0.316036757935816,0,0,6.80879211507576,0,0.129358683782755,0,1.24138163549592,1.24858172321449,2.63278432963394,1.522324745573,0,0,1.98475558249466,0.49465875882444,0.322928853391811,0.120625849856312,0.119372344003136,0.328281799490123,0,4.45020724825223,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.216010681643603,0,0.218362563746178,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0.56369293868419,0.598066184175915,0.165458490457098,0.388902376688095,1.16243841129958,0.168956125490778,0.234714477291508,0,0.314578033277133,0.241584120826006,0.288030006257865,0,0,0,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0,0,0,0.183151624267265,0,1.00314420807073,14.1187960654267,16.1113832777512,12.0308057822273,16.3260523226503,14.3867329151835,12.8416962556249,18.9006300064906,15.7612421128477,16.3131267234314,19.1571315348173,0,0,0.170733605754134,0.486213434136588,0.838452650511929,1.2869045591501,0,0.618105171716683,1.92551525755089,0.758091635291392,0.25347929989024,1.88626341386076,0.468207537349412,0.768301828858431,1.20614484806788,1.42888107384922,0.927074607558844,0.964546102318525,0.412085900803307,0.735994600671987,1.02860775715625,0.532427418478012,1.43061713968393,0.726732083161643,0.846984423737976,0.846146078916765,1.09756783723664,1.05227884575137,0.679020569229309,0.561142271657738,1.06771516311757,0.788035859004508,0,0.929621047115796,0.385813221962283,0.749431733813838,0.467863216890817,0.214871054048298,0.382576664137687,0.661774257358546,0.231867835620421
|phase1_expression=0.80074423552397,0.697950815278722,0.909998478779072,0,0,1.17515490338323,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,0.159992422793407,0.45881856213434,0.57423196411502,1.29228598847722,0.430942465371778,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24864567805155,4.23192783417626,3.1691570175309,0,0,0,0,0,0.299600110518405,0,1.45165457231869,1.62007125998029,1.26194976810829,4.85606673486466,3.75476519617743,1.46988959057945,1.53352753629178,0.919218786610021,14.3150645299205,19.4084753889485,12.1349161272432,5.01167893374737,5.58074625974699,6.77187381723788,8.09630697104005,5.6276261003168,5.95913166329559,6.18720029494702,6.40672563595963,6.33758115806022,0.454357159999104,0.302286240427142,3.47837386442013,0,0,0,0,0,1.12355536105401,0,0,0,0.985903938436763,0,0,0,0,0,0,0.34255163915718,0,1.1875371125186,0,0,0.461230994512117,0.452167921657868,0.23517741427141,1.38233250462643,0,0.144599356919912,0,0.323533699894818,0,0,0,9.36898550436951,6.70229461803056,0.766371165625774,0,0,0,5.99162557619291,12.3525162761029,3.01570445070875,17.9039049798045,17.6443665557928,12.4672826735736,13.9527486238272,0.203678727700633,0,0,0.841767423545896,0.130120442962704,0,0.180062129805349,0.452114453507145,1.42876648217788,2.17793324484245,1.59292931751539,1.55222022443409,0,0,0.175951124163949,0,0.278047249225598,0,0.411564272815887,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0.350296027101508,0.987359099480883,0.32833492815819,1.21603214318784,1.31579988682799,1.3173006917463,0.939444931322602,17.8746456279508,3.39585220851639,0,0,0.426576501070468,0,0.128867461322093,0.201683524623343,0.444756087689741,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0,0,0,0,0.189667900953082,0.342745537829186,0,0,0.193952487167626,0.140271639780637,0.126473074248515,0.147610147979602,0.156998727841375,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0.585400943573396,0,0,0,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,4.33486592967038,6.09500770279457,0,0,0.631016438832513,0.780877488593277,0,0.238968797952552,0.222798674082394,1.41538265394416,0,0.584511715822624,0,8.03303291054518,0.283880170416537,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0.295301892880773,0.922305443831782,0.516856586336442,0,0.712994756769443,0.316036757935816,0,0,6.80879211507576,0,0.129358683782755,0,1.24138163549592,1.24858172321449,2.63278432963394,1.522324745573,0,0,1.98475558249466,0.49465875882444,0.322928853391811,0.120625849856312,0.119372344003136,0.328281799490123,0,4.45020724825223,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.216010681643603,0,0.218362563746178,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0.56369293868419,0.598066184175915,0.165458490457098,0.388902376688095,1.16243841129958,0.168956125490778,0.234714477291508,0,0.314578033277133,0.241584120826006,0.288030006257865,0,0,0,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0,0,0,0.183151624267265,0,1.00314420807073,14.1187960654267,16.1113832777512,12.0308057822273,16.3260523226503,14.3867329151835,12.8416962556249,18.9006300064906,15.7612421128477,16.3131267234314,19.1571315348173,0,0,0.170733605754134,0.486213434136588,0.838452650511929,1.2869045591501,0,0.618105171716683,1.92551525755089,0.758091635291392,0.25347929989024,1.88626341386076,0.468207537349412,0.768301828858431,1.20614484806788,1.42888107384922,0.927074607558844,0.964546102318525,0.412085900803307,0.735994600671987,1.02860775715625,0.532427418478012,1.43061713968393,0.726732083161643,0.846984423737976,0.846146078916765,1.09756783723664,1.05227884575137,0.679020569229309,0.561142271657738,1.06771516311757,0.788035859004508,0,0.929621047115796,0.385813221962283,0.749431733813838,0.467863216890817,0.214871054048298,0.382576664137687,0.661774257358546,0.231867835620421
|short_description=p3@Syt7
}}
}}

Latest revision as of 20:32, 1 October 2015

Short description:p3@Syt7
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Syt7_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 180bp_to_ENSMUST00000073899, ENSMUST00000076968, ENSMUST00000169121, NM_018801, NM_173067, NM_173068, uc008gpp.2, uc008gpq.2, uc012bin.1_5end
EntrezGene:Syt7
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Syt7

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D314.32
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F319.41
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.13
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.01
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.58
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.10
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.96
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.34
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I31.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B29.37
cerebellum, neonate N30.CNhs11135.1395-42I26.70
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.99
corpus striatum, adult.CNhs10487.19-21D812.35
corpus striatum, neonate N00.CNhs11226.630-43F13.02
cortex, adult.CNhs10473.12-14D517.90
cortex, neonate N30.CNhs11107.1392-42F217.64
diencephalon, adult.CNhs10482.20-12F212.47
diencephalon, neonate N30.CNhs11201.1388-42B213.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G11.22
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E817.87
hippocampus, neonate N00.CNhs11228.627-43G13.40
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.33
medulla oblongata, neonate N30.CNhs11200.1396-42A36.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I98.03
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G86.81
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.12
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A216.11
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.03
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.33
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A414.39
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A618.90
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A715.76
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A816.31
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A919.16
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.16e-2123
neuroblast (sensu Vertebrata)2.16e-2123
neuron4.33e-1433
neuronal stem cell4.33e-1433
neuroblast4.33e-1433
electrically signaling cell4.33e-1433
electrically responsive cell7.25e-1139
electrically active cell7.25e-1139
neural cell3.04e-0943
ectodermal cell6.90e-0944
neurectodermal cell6.90e-0944

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.23e-4254
neural tube2.48e-3952
neural rod2.48e-3952
future spinal cord2.48e-3952
neural keel2.48e-3952
central nervous system2.70e-3773
nervous system7.27e-3675
neurectoderm9.84e-3664
neural plate9.84e-3664
presumptive neural plate9.84e-3664
brain7.74e-3447
future brain7.74e-3447
regional part of brain1.22e-3246
gray matter4.86e-3134
anterior neural tube3.78e-3040
ectoderm-derived structure5.09e-3095
ectoderm5.09e-3095
presumptive ectoderm5.09e-3095
ecto-epithelium1.87e-2973
regional part of forebrain4.70e-2939
forebrain4.70e-2939
future forebrain4.70e-2939
pre-chordal neural plate6.54e-2949
structure with developmental contribution from neural crest9.64e-2692
brain grey matter1.21e-2529
regional part of telencephalon1.21e-2529
telencephalon1.21e-2529
cerebral cortex3.33e-1721
cerebral hemisphere3.33e-1721
pallium3.33e-1721
occipital lobe3.90e-1410
visual cortex3.90e-1410
neocortex3.90e-1410
regional part of cerebral cortex9.42e-1417
tube1.71e-13114
anatomical conduit3.78e-13122
basal ganglion1.34e-098
nuclear complex of neuraxis1.34e-098
aggregate regional part of brain1.34e-098
collection of basal ganglia1.34e-098
cerebral subcortex1.34e-098
posterior neural tube3.63e-0912
chordal neural plate3.63e-0912
spinal cord2.05e-076
dorsal region element2.05e-076
dorsum2.05e-076
epithelium3.48e-07174
cell layer6.03e-07176
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