FFCP PHASE1:Mm9::chr1:9898735..9898750,+: Difference between revisions
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{{FFCP|EntrezGene=240697|HGNC=|MCL_coexpression_id=17|UniProt=Q8CD58,E9Q956,D3YTV7|association_with_transcript=16bp_to_ENSMUST00000052843,ENSMUST00000171802,NM_177722,uc007agz.1,uc011wie.1_5end|description=CAGE_peak_2_at_6030422M02Rik_5end|id=chr1:9898735..9898750,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.08e-20!52;UBERON:0005068!5.08e-20!52;UBERON:0006241!5.08e-20!52;UBERON:0007135!5.08e-20!52;UBERON:0003080!1.55e-19!40;UBERON:0003056!1.03e-18!49;UBERON:0002780!1.10e-18!39;UBERON:0001890!1.10e-18!39;UBERON:0006240!1.10e-18!39;UBERON:0000955!2.25e-18!50;UBERON:0006238!2.25e-18!50;UBERON:0002616!1.54e-17!49;UBERON:0000033!1.22e-16!63;UBERON:0002020!2.16e-16!34;UBERON:0002791!5.11e-15!29;UBERON:0003528!5.11e-15!29;UBERON:0001893!5.11e-15!29;UBERON:0001017!1.63e-14!73;UBERON:0005743!1.63e-14!73;UBERON:0002346!1.90e-14!71;UBERON:0003075!1.90e-14!71;UBERON:0007284!1.90e-14!71;UBERON:0000073!1.14e-13!75;UBERON:0001016!1.14e-13!75;UBERON:0007811!8.20e-12!86;UBERON:0000153!2.00e-11!94;UBERON:0000956!3.29e-11!21;UBERON:0001869!3.29e-11!21;UBERON:0000203!3.29e-11!21;UBERON:0002619!2.23e-10!17;UBERON:0002021!4.40e-10!10;UBERON:0000411!4.40e-10!10;UBERON:0001950!4.40e-10!10;UBERON:0004121!4.95e-09!102;UBERON:0000924!4.95e-09!102;UBERON:0006601!4.95e-09!102|ontology_enrichment_uberon_v019_2=UBERON:0002021,6.57e-19,10;UBERON:0000411,6.57e-19,10;UBERON:0001950,6.57e-19,10;UBERON:0002619,1.10e-14,17;UBERON:0000956,9.22e-12,21;UBERON:0001869,9.22e-12,21;UBERON:0000203,9.22e-12,21;UBERON:0003528,9.53e-11,29;UBERON:0002791,9.53e-11,29;UBERON:0001893,9.53e-11,29;UBERON:0000955,8.76e-10,47;UBERON:0006238,8.76e-10,47;UBERON:0003080,1.80e-09,40;UBERON:0002020,4.98e-09,34;UBERON:0002616,4.40e-08,46;UBERON:0002780,9.47e-08,39;UBERON:0001890,9.47e-08,39;UBERON:0006240,9.47e-08,39;UBERON:0003056,1.62e-07,49;UBERON:0001049,5.15e-07,52;UBERON:0005068,5.15e-07,52;UBERON:0006241,5.15e-07,52;UBERON:0007135,5.15e-07,52|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0,0.285650984403804,0.220868540951614,0.244981598429908,0.0958454710182364,0.919218786610021,0,0.127687338085188,0.153606533256243,0.395658863190582,0.365950574409639,0.52091337055676,0,0.56276261003168,0.45839474333043,0,0.427115042397309,0.559198337475902,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04853447583376,0.457500602818626,1.13088916901578,0.869121600961382,1.02286182932132,0.62336413367868,0.648965052271031,0,0,0,0,0.520481771850815,0,0.180062129805349,0.30140963567143,0.408218994907967,0,0.0937017245597288,0,0.215567992932842,0.567318240503458,0,0.219195732427575,0,0,0,0.796137067273973,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0.134206418760372,1.26173969138476,0.411618449517138,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0,0,0,0,0,0,0,0.189667900953082,0.456994050438915,1.1270773567308,0,0.193952487167626,0,0.189709611372772,0,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0.335012514883631,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.35163505977661,0,0,0,0,0,0,0,0.283076530788832,0,0,0,1.28528526568723,0,0.534196811001766,0.162886959353576,0,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.214337035031592,0.354680467284547,0.178368817602071,0,0.304464949114599,0,0.63549621259146,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0.188368457004691,0,0,0,0,0,0,0.632671987162271,0.203319467126849,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,2.81846469342095,0.448549638131936,0.165458490457098,0,0,0.337912250981556,0.234714477291508,0.2604087696879,0.838874755405687,7.24752362478018,9.79302021276743,0,0,0.205421914329655,0,0.179026695667481,0,0.120195449519969,0,0.403865799792591,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0,0.564751842617067,0.920650473014354,0.572895513439397,1.3748254587495,2.05524755931193,1.5107877947794,1.35004500046361,1.80128481289688,0.906284817968409,2.07104124700728,0.103787347584177,1.19707462020309,0.170733605754134,0.243106717068294,0,0,0,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0,0,0,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0,0.290692833264657,0.0941093804153306,0,0,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0,0,0,0.231867835620421|short_description=p2@6030422M02Rik}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=240697 | |||
|HGNC= | |||
|MCL_coexpression_id=17 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CD58,E9Q956,D3YTV7 | |||
|association_with_transcript=16bp_to_ENSMUST00000052843,ENSMUST00000171802,NM_177722,uc007agz.1,uc011wie.1_5end | |||
|cluster_id=chr1:9898735..9898750,+ | |||
|description=CAGE_peak_2_at_6030422M02Rik_5end | |||
|id=chr1:9898735..9898750,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.08e-20!52;UBERON:0005068!5.08e-20!52;UBERON:0006241!5.08e-20!52;UBERON:0007135!5.08e-20!52;UBERON:0003080!1.55e-19!40;UBERON:0003056!1.03e-18!49;UBERON:0002780!1.10e-18!39;UBERON:0001890!1.10e-18!39;UBERON:0006240!1.10e-18!39;UBERON:0000955!2.25e-18!50;UBERON:0006238!2.25e-18!50;UBERON:0002616!1.54e-17!49;UBERON:0000033!1.22e-16!63;UBERON:0002020!2.16e-16!34;UBERON:0002791!5.11e-15!29;UBERON:0003528!5.11e-15!29;UBERON:0001893!5.11e-15!29;UBERON:0001017!1.63e-14!73;UBERON:0005743!1.63e-14!73;UBERON:0002346!1.90e-14!71;UBERON:0003075!1.90e-14!71;UBERON:0007284!1.90e-14!71;UBERON:0000073!1.14e-13!75;UBERON:0001016!1.14e-13!75;UBERON:0007811!8.20e-12!86;UBERON:0000153!2.00e-11!94;UBERON:0000956!3.29e-11!21;UBERON:0001869!3.29e-11!21;UBERON:0000203!3.29e-11!21;UBERON:0002619!2.23e-10!17;UBERON:0002021!4.40e-10!10;UBERON:0000411!4.40e-10!10;UBERON:0001950!4.40e-10!10;UBERON:0004121!4.95e-09!102;UBERON:0000924!4.95e-09!102;UBERON:0006601!4.95e-09!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,6.57e-19,10;UBERON:0000411,6.57e-19,10;UBERON:0001950,6.57e-19,10;UBERON:0002619,1.10e-14,17;UBERON:0000956,9.22e-12,21;UBERON:0001869,9.22e-12,21;UBERON:0000203,9.22e-12,21;UBERON:0003528,9.53e-11,29;UBERON:0002791,9.53e-11,29;UBERON:0001893,9.53e-11,29;UBERON:0000955,8.76e-10,47;UBERON:0006238,8.76e-10,47;UBERON:0003080,1.80e-09,40;UBERON:0002020,4.98e-09,34;UBERON:0002616,4.40e-08,46;UBERON:0002780,9.47e-08,39;UBERON:0001890,9.47e-08,39;UBERON:0006240,9.47e-08,39;UBERON:0003056,1.62e-07,49;UBERON:0001049,5.15e-07,52;UBERON:0005068,5.15e-07,52;UBERON:0006241,5.15e-07,52;UBERON:0007135,5.15e-07,52 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0,0.285650984403804,0.220868540951614,0.244981598429908,0.0958454710182364,0.919218786610021,0,0.127687338085188,0.153606533256243,0.395658863190582,0.365950574409639,0.52091337055676,0,0.56276261003168,0.45839474333043,0,0.427115042397309,0.559198337475902,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04853447583376,0.457500602818626,1.13088916901578,0.869121600961382,1.02286182932132,0.62336413367868,0.648965052271031,0,0,0,0,0.520481771850815,0,0.180062129805349,0.30140963567143,0.408218994907967,0,0.0937017245597288,0,0.215567992932842,0.567318240503458,0,0.219195732427575,0,0,0,0.796137067273973,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0.134206418760372,1.26173969138476,0.411618449517138,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0,0,0,0,0,0,0,0.189667900953082,0.456994050438915,1.1270773567308,0,0.193952487167626,0,0.189709611372772,0,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0.335012514883631,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.35163505977661,0,0,0,0,0,0,0,0.283076530788832,0,0,0,1.28528526568723,0,0.534196811001766,0.162886959353576,0,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.214337035031592,0.354680467284547,0.178368817602071,0,0.304464949114599,0,0.63549621259146,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0.188368457004691,0,0,0,0,0,0,0.632671987162271,0.203319467126849,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,2.81846469342095,0.448549638131936,0.165458490457098,0,0,0.337912250981556,0.234714477291508,0.2604087696879,0.838874755405687,7.24752362478018,9.79302021276743,0,0,0.205421914329655,0,0.179026695667481,0,0.120195449519969,0,0.403865799792591,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0,0.564751842617067,0.920650473014354,0.572895513439397,1.3748254587495,2.05524755931193,1.5107877947794,1.35004500046361,1.80128481289688,0.906284817968409,2.07104124700728,0.103787347584177,1.19707462020309,0.170733605754134,0.243106717068294,0,0,0,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0,0,0,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0,0.290692833264657,0.0941093804153306,0,0,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0,0,0,0.231867835620421 | |||
|short_description=p2@6030422M02Rik | |||
}} |
Latest revision as of 20:36, 1 October 2015
Short description: | p2@6030422M02Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_6030422M02Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:17 |
Association with transcript: | 16bp_to_ENSMUST00000052843, ENSMUST00000171802, NM_177722, uc007agz.1, uc011wie.1_5end |
EntrezGene: | 6030422M02Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 6.57e-19 | 10 |
visual cortex | 6.57e-19 | 10 |
neocortex | 6.57e-19 | 10 |
regional part of cerebral cortex | 1.10e-14 | 17 |
cerebral cortex | 9.22e-12 | 21 |
cerebral hemisphere | 9.22e-12 | 21 |
pallium | 9.22e-12 | 21 |
brain grey matter | 9.53e-11 | 29 |
regional part of telencephalon | 9.53e-11 | 29 |
telencephalon | 9.53e-11 | 29 |
brain | 8.76e-10 | 47 |
future brain | 8.76e-10 | 47 |
anterior neural tube | 1.80e-09 | 40 |
gray matter | 4.98e-09 | 34 |
regional part of brain | 4.40e-08 | 46 |
regional part of forebrain | 9.47e-08 | 39 |
forebrain | 9.47e-08 | 39 |
future forebrain | 9.47e-08 | 39 |
pre-chordal neural plate | 1.62e-07 | 49 |
neural tube | 5.15e-07 | 52 |
neural rod | 5.15e-07 | 52 |
future spinal cord | 5.15e-07 | 52 |
neural keel | 5.15e-07 | 52 |