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FFCP PHASE1:Mm9::chr16:31428850..31428923,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=71911
|EntrezGene=71911
|HGNC=
|HGNC=
|MCL_coexpression_id=12
|TSSclassifier=NA
|UniProt=Q80XN0
|UniProt=Q80XN0
|association_with_transcript=11bp_to_NM_001122683,uc007yxj.2,uc007yxk.2_5end
|association_with_transcript=11bp_to_NM_001122683,uc007yxj.2,uc007yxk.2_5end
|cluster_id=chr16:31428850..31428923,+
|description=CAGE_peak_1_at_Bdh1_5end
|description=CAGE_peak_1_at_Bdh1_5end
|id=chr16:31428850..31428923,+
|id=chr16:31428850..31428923,+
|ontology_enrichment_celltype=CL:0000117!1.80e-09!23;CL:0000337!1.80e-09!23;CL:0002563!4.37e-07!9;CL:0002251!4.37e-07!9;CL:0002319!6.77e-07!43;CL:0000221!7.02e-07!44;CL:0000133!7.02e-07!44
|ontology_enrichment_celltype=CL:0000117!1.80e-09!23;CL:0000337!1.80e-09!23;CL:0002563!4.37e-07!9;CL:0002251!4.37e-07!9;CL:0002319!6.77e-07!43;CL:0000221!7.02e-07!44;CL:0000133!7.02e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000117,1.77e-09,23;CL:0000337,1.77e-09,23;CL:0002563,4.31e-07,9;CL:0002251,4.31e-07,9;CL:0002319,6.68e-07,43;CL:0000221,6.92e-07,44;CL:0000133,6.92e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000064!1.10e-14!99;UBERON:0002020!1.38e-13!34;UBERON:0001049!5.07e-13!52;UBERON:0005068!5.07e-13!52;UBERON:0006241!5.07e-13!52;UBERON:0007135!5.07e-13!52;UBERON:0001017!5.97e-13!73;UBERON:0005743!5.97e-13!73;UBERON:0000073!1.15e-12!75;UBERON:0001016!1.15e-12!75;UBERON:0000955!1.68e-11!50;UBERON:0006238!1.68e-11!50;UBERON:0002616!2.90e-11!49;UBERON:0002791!4.13e-11!29;UBERON:0003528!4.13e-11!29;UBERON:0001893!4.13e-11!29;UBERON:0000033!1.22e-10!63;UBERON:0004121!2.62e-10!102;UBERON:0000924!2.62e-10!102;UBERON:0006601!2.62e-10!102;UBERON:0000160!3.00e-10!43;UBERON:0000344!4.45e-10!15;UBERON:0007811!5.98e-10!86;UBERON:0005409!1.36e-09!59;UBERON:0003080!3.06e-09!40;UBERON:0002780!4.50e-09!39;UBERON:0001890!4.50e-09!39;UBERON:0006240!4.50e-09!39;UBERON:0000956!6.50e-09!21;UBERON:0001869!6.50e-09!21;UBERON:0000203!6.50e-09!21;UBERON:0001242!7.49e-09!13;UBERON:0000060!7.49e-09!13;UBERON:0001262!7.49e-09!13;UBERON:0004786!7.49e-09!13;UBERON:0000153!8.52e-09!94;UBERON:0002346!1.74e-08!71;UBERON:0003075!1.74e-08!71;UBERON:0007284!1.74e-08!71;UBERON:0003056!1.79e-08!49;UBERON:0002619!1.69e-07!17;UBERON:0003350!4.37e-07!9;UBERON:0004808!4.37e-07!9;UBERON:0001277!4.37e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.85e-16,31;UBERON:0000073,1.22e-13,54;UBERON:0002020,1.34e-13,34;UBERON:0005409,3.24e-13,47;UBERON:0004121,4.88e-13,95;UBERON:0000924,4.88e-13,95;UBERON:0006601,4.88e-13,95;UBERON:0001049,4.92e-13,52;UBERON:0005068,4.92e-13,52;UBERON:0006241,4.92e-13,52;UBERON:0007135,4.92e-13,52;UBERON:0001017,5.80e-13,73;UBERON:0001016,1.12e-12,75;UBERON:0010371,4.59e-12,73;UBERON:0002346,1.54e-11,64;UBERON:0003075,1.54e-11,64;UBERON:0007284,1.54e-11,64;UBERON:0003528,4.03e-11,29;UBERON:0002791,4.03e-11,29;UBERON:0001893,4.03e-11,29;UBERON:0000955,1.00e-10,47;UBERON:0006238,1.00e-10,47;UBERON:0002616,1.72e-10,46;UBERON:0000344,4.35e-10,15;UBERON:0011216,5.20e-10,194;UBERON:0003080,3.00e-09,40;UBERON:0002780,4.42e-09,39;UBERON:0001890,4.42e-09,39;UBERON:0006240,4.42e-09,39;UBERON:0000956,6.37e-09,21;UBERON:0001869,6.37e-09,21;UBERON:0000203,6.37e-09,21;UBERON:0001242,7.35e-09,13;UBERON:0001262,7.35e-09,13;UBERON:0004786,7.35e-09,13;UBERON:0003056,1.76e-08,49;UBERON:0002619,1.66e-07,17;UBERON:0003350,4.31e-07,9;UBERON:0004808,4.31e-07,9;UBERON:0001277,4.31e-07,9
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.33236394384853,9.50492009360836,13.8414334641938,3.38217769156408,0.864090018773596,28.1249897359079,17.231643299664,20.3367695186358,24.6849563657811,24.7056840021124,29.6035218624085,26.3228034448732,24.9595300925035,28.9773711351184,23.7003168697049,28.3321580234522,28.8475326989667,30.2105182750634,28.2842103279397,40.5847386671228,6.88156455459601,10.6759489365276,17.2921154855001,16.227925898704,5.44279178808428,4.39563898241436,29.368467933832,8.02515366456581,150.22399013614,134.414969060096,136.349132198576,104.314881682618,75.3590771747706,72.5178141494113,63.4521150217897,62.5946472481666,69.7839309835675,71.968683333503,13.0772057956063,16.3600198094423,16.2196925466427,13.8570828728928,20.3324767749143,35.6656406393027,28.6698278864084,28.6388729562063,25.994455976937,27.5439960822539,28.6431608875971,22.6351609663291,25.5641315392779,27.5308155340938,25.2716063404698,28.5776214769844,31.9840739607801,28.1647461877009,34.2031297666745,27.3789991449979,28.4581479479895,30.3483628532467,24.0820551846794,27.1797799102454,26.3506265162926,23.7767048175611,26.7074840394248,19.2040889349625,27.1608227691724,26.9348290395714,27.6419592229326,27.97527299466,27.4184798923692,30.3676208724493,26.8140189263787,37.4715866906919,29.241451055676,29.6522054586652,11.2860115920618,12.1325280515734,7.18790290423307
|phase1_expression=15.6945870162698,248.819465646864,267.539552761047,225.033373212282,244.938011943764,160.82834249159,169.602777072352,28.6653778040299,19.42884365693,27.3855495796732,28.2509647572083,25.7664073554937,41.2593759134206,36.1046261990459,8.99396356902289,9.51633756732182,6.99561878128147,8.3597473819933,9.73512478600745,3.81950686618227,16.1582251287033,31.6738134330824,42.0531660513686,175.031710535987,176.874555702788,233.138177430698,244.242051822195,217.195002547376,105.272974378831,94.763328789734,128.381965669421,0.635030673459631,0,0,138.071074241109,177.206131952153,151.493662346678,0.418531630736908,0,0.523523743973798,0,0,0.485510353031154,0.125896817975577,0.101376931219515,0.183546752161682,12.5182615095686,99.2014461531032,51.8459391253353,41.2191386037481,59.4942291907791,152.37771822687,7.21465206048266,36.9934692425786,34.2815675125313,5.40244815675489,2.0057340795713,5.15672092277442,62.1111534838965,76.1747010151727,74.158274210223,18.9752937958714,21.3430751066673,0.449949858640699,0.988866362566974,0.7104801149461,39.8468146989478,64.9328935993427,88.8619977483654,95.7192102771687,95.277207492176,156.536739453284,152.620161797565,81.2113998795145,70.4464211984037,79.9720344350718,51.7544640697127,41.7537595538564,47.4644187761792,69.5040736338122,67.7923439093856,58.3422975023571,60.0243447852969,39.9561453122493,46.4506673241503,101.941490573889,97.9517163897828,77.9149683549756,17.7956554332983,12.0158780569789,0.869593466105033,0,0,0,0,0,27.1057730854281,0,0,0,23.802537942259,0,0,0,13.2059535016841,14.6948721975557,12.6381111253696,30.7154636444271,7.25026074212081,1.48442139064825,7.28638372417771,6.69824052286711,4.38169444786511,7.83757730873637,3.17489509266403,1.50799909595611,14.0901131608593,1.59059292611903,12.3845477272982,7.92657564742305,6.40440403535141,6.30337829075789,169.616502708491,47.4304891158706,54.0372503578714,113.422932512615,1.67741174308288,0.599902730993408,1.01656181658452,36.5489160147767,34.312545211397,87.078466014215,37.3722288413394,47.3073596061111,35.7395436642443,47.536690078853,2.13862664085664,8.58408097209642,11.8779696463827,121.214508990609,5.59517904739626,11.4951052216736,13.6847218652065,14.6183673300644,13.8114093277196,15.7579875950365,23.144325966253,55.6212247088884,7.11374376678379,8.32066752738405,13.0203831881322,11.3981780862339,16.1267404550847,15.3230953269753,16.6683530490434,4.77682240364384,0.702213187313235,0.257347907114715,0.568326998791185,10.7705401718461,5.62862543954631,7.74266864282364,4.7348947117042,4.72234156193769,3.39387648352232,5.11574678450897,7.51165523918934,4.55384835231961,0.658239399653922,0.656669856316381,0.486412857275134,0.438599962275997,11.1970558798436,34.0884303651344,37.8521907415429,82.117880678669,91.8564216694958,125.614019165184,5.33220626338085,7.19933682767359,46.0056836919873,135.531328546886,206.144446644195,230.553458848422,132.393608170919,215.920329643178,184.731378468198,184.432649582147,170.983504403468,111.453606673123,119.308203530831,107.934570103867,6.82804443431094,6.16941968092536,18.0332377076929,15.4775009162439,28.3170631264734,27.9841921362371,18.7812515259044,48.2685183893299,46.9426196245711,48.248291093424,0.592905254174298,5.17219827719892,7.46924181430171,6.2961391467759,6.8972441272091,7.47649195232492,9.93040821947537,6.61701116136864,2.10775794807546,2.47105271869273,0,1.11642284300551,1.24815069245824,0.252578877947112,1.79397413521912,0,3.69506380333209,4.16881105895066,3.7481944581666,1.69745085775188,1.87752198630802,1.67506257441816,1.19021820443007,1.36593553500459,1.26108115284953,1.55025282754142,1.2756381492599,3.11340297959902,1.89953480052485,2.16973587872267,4.52373851817817,6.52686820582452,78.6822836830458,34.7680300343963,45.7569181465207,50.8698719810162,0,6.05930225290495,15.4599027513966,10.9322848403059,13.3562506594335,3.34556317133573,6.23836287430704,5.66153061577665,5.66734982344852,9.35218745316198,7.51046778098395,44.3423416662094,4.25820255624806,2.13678724400706,3.74640006513225,3.79431282836832,5.30980553359851,3.8844901784797,15.1161778482376,19.6149282946134,16.5369060013233,15.9866276930842,57.3710810833451,5.08947221268508,11.0514187299264,8.84902922220285,6.32511651449993,4.12542172992747,13.6175842301515,6.84232157318979,10.3486947026204,12.8602221018955,15.2512600932355,18.9070946658195,15.6321569572015,15.8321773539592,9.62154003061212,11.0152676849186,8.15955072803359,18.3023740765043,13.724476269152,21.1698366497827,33.3048839768751,38.0806887408542,124.753798077576,40.0518652342701,7.17657699350981,5.57244543500701,7.40778109478847,3.39063222608444,6.83471138605126,7.0921233694022,0.849892149969277,3.07893195112048,2.21119958087078,78.2829906772393,4.74503990371703,17.485474172909,42.3380936021461,44.7448953470963,74.4616342374466,53.8108742075435,44.8808264588574,84.8089252028256,176.665208596714,14.2908042009993,6.76431526421028,9.12050930868271,10.5893433892542,6.80579159204167,8.52454834953025,8.10989402355735,8.33236394384853,9.50492009360836,13.8414334641938,3.38217769156408,0.864090018773596,28.1249897359079,17.231643299664,20.3367695186358,24.6849563657811,24.7056840021124,29.6035218624085,26.3228034448732,24.9595300925035,28.9773711351184,23.7003168697049,28.3321580234522,28.8475326989667,30.2105182750634,28.2842103279397,40.5847386671228,6.88156455459601,10.6759489365276,17.2921154855001,16.227925898704,5.44279178808428,4.39563898241436,29.368467933832,8.02515366456581,150.22399013614,134.414969060096,136.349132198576,104.314881682618,75.3590771747706,72.5178141494113,63.4521150217897,62.5946472481666,69.7839309835675,71.968683333503,13.0772057956063,16.3600198094423,16.2196925466427,13.8570828728928,20.3324767749143,35.6656406393027,28.6698278864084,28.6388729562063,25.994455976937,27.5439960822539,28.6431608875971,22.6351609663291,25.5641315392779,27.5308155340938,25.2716063404698,28.5776214769844,31.9840739607801,28.1647461877009,34.2031297666745,27.3789991449979,28.4581479479895,30.3483628532467,24.0820551846794,27.1797799102454,26.3506265162926,23.7767048175611,26.7074840394248,19.2040889349625,27.1608227691724,26.9348290395714,27.6419592229326,27.97527299466,27.4184798923692,30.3676208724493,26.8140189263787,37.4715866906919,29.241451055676,29.6522054586652,11.2860115920618,12.1325280515734,7.18790290423307
|short_description=p1@Bdh1
|short_description=p1@Bdh1
}}
}}

Latest revision as of 21:01, 1 October 2015

Short description:p1@Bdh1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Bdh1_5end
Coexpression cluster:MCL_coexpression_mm9:12
Association with transcript: 11bp_to_NM_001122683, uc007yxj.2, uc007yxk.2_5end
EntrezGene:Bdh1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Bdh1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G715.69
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5248.82
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6267.54
CD326+ enterocyte, pool1.CNhs13542.11848-124I3225.03
CD326+ enterocyte, pool2.CNhs13197.11849-124I4244.94
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7160.83
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8169.60
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E928.67
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E719.43
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F227.39
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E628.25
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F125.77
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E441.26
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E836.10
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A18.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.52
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A28.36
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A49.74
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A316.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H231.67
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I942.05
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1175.03
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2176.87
GP2+ M cell, pool1.CNhs13228.11845-124H9233.14
GP2+ M cell, pool2.CNhs13231.11846-124I1244.24
GP2+ M cell, pool3.CNhs13240.11847-124I2217.20
Ileum epithelium, pool1.CNhs13199.10252-104B9105.27
Ileum epithelium, pool2.CNhs13232.10253-104C194.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8128.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5138.07
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6177.21
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7151.49
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B712.52
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C299.20
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B851.85
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C341.22
Mouse Astrocytes, donor2.CNhs12078.11552-120C459.49
Mouse Astrocytes, donor3.CNhs12107.11633-122C4152.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A27.21
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I936.99
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A134.28
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.40
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C362.11
Mouse Granule cells, donor2.CNhs12357.11731-123E376.17
Mouse Granule cells, donor3.CNhs12108.11636-122C774.16
Mouse Meningeal cells, donor1.CNhs12132.11716-123C618.98
Mouse Meningeal cells, donor3.CNhs12109.11639-122D121.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C839.85
Mouse Microglia, donor2.CNhs12634.11736-123E864.93
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D588.86
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F595.72
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D995.28
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1156.54
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5152.62
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D281.21
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F270.45
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D679.97
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D351.75
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F341.75
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D747.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D469.50
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F467.79
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D858.34
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E460.02
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E539.96
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I646.45
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6101.94
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F697.95
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E177.91
Mouse Schwann, donor1.CNhs12507.11728-123D917.80
Mouse Schwann, donor2.CNhs12573.11746-123F912.02
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A727.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G623.80
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G113.21
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G214.69
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G312.64
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B630.72
accessory axillary lymph node, adult.CNhs10475.1063-29H97.25
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C57.29
adrenal gland, embryo E16.CNhs11004.1254-43D66.70
adrenal gland, embryo E17.CNhs11043.1263-45I14.38
adrenal gland, embryo E18.CNhs11026.1262-18F57.84
adrenal gland, neonate N00.CNhs11191.1311-23C13.17
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A814.09
aorta, adult.CNhs10498.46-23H11.59
bone (os femoris), adult.CNhs10483.56-12G212.38
bone (os femoris), neonate N02.CNhs11227.1985-43F57.93
bone (os femoris), neonate N16.CNhs11225.1525-43A66.40
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H4169.62
cerebellum, adult.CNhs10494.15-8B247.43
cerebellum, neonate N30.CNhs11135.1395-42I254.04
colon, adult.CNhs10468.36-18H7113.42
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A436.55
corpus striatum, adult.CNhs10487.19-21D834.31
corpus striatum, neonate N00.CNhs11226.630-43F187.08
cortex, adult.CNhs10473.12-14D537.37
cortex, neonate N30.CNhs11107.1392-42F247.31
diencephalon, adult.CNhs10482.20-12F235.74
diencephalon, neonate N30.CNhs11201.1388-42B247.54
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.58
epididymis, adult.CNhs10490.58-23B211.88
eyeball, adult.CNhs10484.31-12G4121.21
eyeball, embryo E12.CNhs11016.345-16C65.60
eyeball, embryo E14.CNhs10521.399-16E211.50
eyeball, embryo E15.CNhs10593.426-16C913.68
eyeball, embryo E17.CNhs11023.1261-18D414.62
eyeball, neonate N00.CNhs11207.633-15C613.81
eyeball, neonate N01.CNhs11140.1532-43E715.76
eyeball, neonate N02.CNhs11205.1551-44G823.14
eyeball, neonate N16.CNhs11188.777-19A255.62
forelimb, embryo E11.CNhs10596.335-25E27.11
forelimb, embryo E12.CNhs10600.359-14H28.32
forelimb, embryo E13.CNhs10589.384-1E213.02
forelimb, embryo E14.CNhs10577.413-26A811.40
forelimb, embryo E15.CNhs11007.437-20E716.13
forelimb, embryo E17.CNhs10598.1517-43C415.32
forelimb, embryo E18.CNhs11008.1520-43B516.67
gonad, embryo E13.CNhs11044.1564-45I64.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E910.77
heart, embryo E12.CNhs11015.353-12F55.63
heart, embryo E13.CNhs11013.376-3I97.74
heart, embryo E14.CNhs10597.403-26D44.73
heart, embryo E15.CNhs11017.431-16C84.72
heart, embryo E16.CNhs11021.457-17C63.39
heart, embryo E17.CNhs11025.479-18E55.12
heart, embryo E18.CNhs11030.1283-20G37.51
heart, neonate N00.CNhs11213.639-21E34.55
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D311.20
heart, neonate N30.CNhs11202.1390-42D234.09
hippocampus, adult.CNhs10478.13-16E837.85
hippocampus, neonate N00.CNhs11228.627-43G182.12
intestinal mucosa, adult.CNhs10506.860-29I391.86
intestine, adult.CNhs10496.178-9A3125.61
intestine, embryo E12.CNhs11019.1251-16I55.33
intestine, embryo E13.CNhs11010.381-16D57.20
intestine, embryo E15.CNhs10602.976-16D846.01
intestine, embryo E16.CNhs10585.463-22H4135.53
intestine, embryo E17.CNhs10582.482-18D3206.14
intestine, embryo E18.CNhs10526.1289-20F7230.55
intestine, neonate N00.CNhs11126.644-26D1132.39
intestine, neonate N01.CNhs11192.1322-23E9215.92
intestine, neonate N06.CNhs11102.688-20B8184.73
intestine, neonate N07.CNhs11095.720-20F2184.43
intestine, neonate N10.CNhs11098.755-23A5170.98
intestine, neonate N20.CNhs11187.827-18D1111.45
intestine, neonate N25.CNhs11121.1352-25E3119.31
intestine, neonate N30.CNhs11131.1384-42G1107.93
kidney, embryo E14.CNhs10606.411-4I96.83
kidney, embryo E15.CNhs10997.434-16F86.17
kidney, embryo E16.CNhs10584.464-22A518.03
kidney, embryo E17.CNhs11028.483-18I215.48
kidney, embryo E18.CNhs11001.1288-20C728.32
kidney, neonate N00.CNhs11214.646-21G727.98
kidney, neonate N10.CNhs11206.758-6D518.78
kidney, neonate N20.CNhs11113.832-19I148.27
kidney, neonate N25.CNhs11122.1353-25F346.94
kidney, neonate N30.CNhs11203.1385-42H148.25
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F85.17
liver, embryo E13.CNhs10524.378-3H67.47
liver, embryo E14.CNhs10594.409-16E16.30
liver, embryo E15.CNhs10520.433-16D76.90
liver, embryo E16.CNhs10523.462-17F57.48
liver, embryo E17.CNhs10510.481-18A39.93
liver, embryo E18.CNhs10579.499-43G46.62
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H11.79
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B13.70
lung, embryo E12.CNhs10522.354-16G24.17
lung, embryo E14.CNhs10604.404-26F83.75
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A43.11
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H22.17
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A16.53
mammary gland, adult lactating day02.CNhs10480.595-22B678.68
mammary gland, adult pregnant day19.CNhs10476.588-5H234.77
medulla oblongata, adult.CNhs10477.17-12C245.76
medulla oblongata, neonate N30.CNhs11200.1396-42A350.87
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.06
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E115.46
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.93
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E313.36
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.35
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.24
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.66
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.35
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.51
olfactory brain, adult.CNhs10489.18-22I944.34
ovary, adult.CNhs10507.91-2I74.26
ovary, embryo E18.CNhs11040.505-44H72.14
ovary, neonate N00.CNhs11217.1299-22I43.75
oviduct, adult pregnant day01.CNhs10500.988-6G63.79
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F43.88
pancreas, embryo E15.CNhs11042.1556-45F215.12
pancreas, embryo E16.CNhs11003.460-26E519.61
pancreas, embryo E17.CNhs10599.1558-45G316.54
pancreas, embryo E18.CNhs10580.1535-43I715.99
pancreas, neonate N00.CNhs11105.645-26G957.37
pancreas, neonate N01.CNhs11138.1531-43D75.09
pancreas, neonate N02.CNhs11139.1539-43D811.05
pancreas, neonate N16.CNhs11136.787-43B68.85
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G813.62
pituitary gland, embryo E12.CNhs11018.346-16E66.84
pituitary gland, embryo E13.CNhs11009.370-44C710.35
pituitary gland, embryo E14.CNhs11037.398-44A512.86
pituitary gland, embryo E15.CNhs10592.427-16B915.25
pituitary gland, embryo E16.CNhs11036.449-43F618.91
pituitary gland, embryo E17.CNhs11039.1265-44F515.63
pituitary gland, neonate N00.CNhs11190.1308-22E915.83
placenta, adult pregnant day10.CNhs10472.539-13I79.62
placenta, adult pregnant day17.CNhs10464.577-18G311.02
prostate, adult.CNhs10470.859-1F88.16
skin, adult.CNhs10492.30-1C318.30
skin, neonate N00.CNhs11124.650-25G413.72
skin, neonate N03.CNhs11215.662-22H321.17
skin, neonate N06.CNhs11097.693-20I533.30
skin, neonate N10.CNhs11108.762-6C438.08
small intestine, neonate N16.CNhs11114.790-21I1124.75
spinal cord, adult.CNhs10505.24-13C940.05
spleen, adult.CNhs10465.25-2G27.18
spleen, embryo E16.CNhs11035.461-43C15.57
spleen, embryo E18.CNhs11011.1271-21F27.41
spleen, neonate N10.CNhs11116.752-24D13.39
spleen, neonate N20.CNhs11112.824-19H16.83
spleen, neonate N25.CNhs11099.1354-25G37.09
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.21
stomach, adult.CNhs10503.33-1H678.28
stomach, embryo E12.CNhs10588.356-43E34.75
stomach, embryo E15.CNhs10603.1252-16G817.49
stomach, embryo E16.CNhs11022.459-17D442.34
stomach, embryo E17.CNhs11006.1035-18D544.74
stomach, embryo E18.CNhs10999.1286-20C674.46
stomach, neonate N03.CNhs11193.1340-24B853.81
stomach, neonate N07.CNhs11210.718-18A944.88
stomach, neonate N25.CNhs11104.1355-25E484.81
stomach, neonate N30.CNhs11134.1386-42I1176.67
submandibular gland, adult.CNhs10469.59-29C114.29
testis, adult.CNhs10504.57-7G56.76
testis, embryo E13.CNhs11031.389-23F59.12
testis, embryo E15.CNhs11034.443-27C510.59
testis, embryo E16.CNhs11033.470-26G56.81
testis, embryo E17.CNhs11029.486-18I58.52
testis, embryo E18.CNhs11027.503-18G58.11
testis, neonate N00.CNhs11189.1300-22B78.33
testis, neonate N07.CNhs11222.726-26I49.50
testis, neonate N10.CNhs11204.763-44D913.84
testis, neonate N20.CNhs11110.839-18H33.38
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B528.12
thymus, embryo E14.CNhs11041.402-44I417.23
thymus, embryo E15.CNhs11005.430-45I220.34
thymus, embryo E16.CNhs11002.456-26C524.68
thymus, embryo E17.CNhs10581.478-18C124.71
thymus, embryo E18.CNhs10595.1273-19G429.60
thymus, neonate N02.CNhs11181.1541-43F826.32
thymus, neonate N03.CNhs11137.2104-43C724.96
thymus, neonate N06.CNhs11197.681-26C428.98
thymus, neonate N07.CNhs11211.713-19D323.70
thymus, neonate N10.CNhs11194.748-24E428.33
thymus, neonate N20.CNhs11186.820-7A228.85
thymus, neonate N25.CNhs11125.1362-25G730.21
thymus, neonate N30.CNhs11132.1393-42G228.28
tongue, adult.CNhs10499.32-1B440.58
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F710.68
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G517.29
urinary bladder, adult.CNhs10481.879-12E416.23
uterus, adult pregnant day19.CNhs10497.590-15F55.44
uterus, adult.CNhs10509.92-27E54.40
vagina, adult.CNhs10502.89-27D529.37
vesicular gland, adult.CNhs10491.51-27F88.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1150.22
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2134.41
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3136.35
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7104.31
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A475.36
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A572.52
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A663.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A762.59
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A869.78
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A971.97
whole body, embryo E11.CNhs11014.324-5I813.08
whole body, embryo E12.CNhs10587.857-27C916.36
whole body, embryo E13.CNhs10512.372-23H216.22
whole body, embryo E14.5.CNhs10578.420-27D213.86
whole body, embryo E14.CNhs10519.395-14B120.33
whole body, embryo E16.CNhs10514.453-14F235.67
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G528.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G528.64
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G525.99
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G527.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G528.64
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G522.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G525.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G527.53
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G525.27
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G528.58
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G531.98
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G528.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G534.20
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G527.38
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G528.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G530.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G524.08
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G527.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G526.35
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G523.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G526.71
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G519.20
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G527.16
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G526.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G527.64
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G527.98
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G527.42
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G530.37
whole body, embryo E17.5.CNhs10513.490-9F926.81
whole body, embryo E17.CNhs10517.475-3I537.47
whole body, embryo E18.CNhs10516.493-3B329.24
whole body, neonate N00.CNhs10525.657-19C229.65
whole body, neonate N01.CNhs10576.659-23C611.29
whole body, neonate N06.CNhs10515.692-21D112.13
whole body, neonate N10.CNhs10518.761-6B47.19





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine9.85e-1631
regional part of nervous system1.22e-1354
gray matter1.34e-1334
gastrointestinal system3.24e-1347
ectoderm-derived structure4.88e-1395
ectoderm4.88e-1395
presumptive ectoderm4.88e-1395
neural tube4.92e-1352
neural rod4.92e-1352
future spinal cord4.92e-1352
neural keel4.92e-1352
central nervous system5.80e-1373
nervous system1.12e-1275
ecto-epithelium4.59e-1273
neurectoderm1.54e-1164
neural plate1.54e-1164
presumptive neural plate1.54e-1164
brain grey matter4.03e-1129
regional part of telencephalon4.03e-1129
telencephalon4.03e-1129
brain1.00e-1047
future brain1.00e-1047
regional part of brain1.72e-1046
mucosa4.35e-1015
organ system subdivision5.20e-10194
anterior neural tube3.00e-0940
regional part of forebrain4.42e-0939
forebrain4.42e-0939
future forebrain4.42e-0939
cerebral cortex6.37e-0921
cerebral hemisphere6.37e-0921
pallium6.37e-0921
intestinal mucosa7.35e-0913
wall of intestine7.35e-0913
gastrointestinal system mucosa7.35e-0913
pre-chordal neural plate1.76e-0849
regional part of cerebral cortex1.66e-0717
epithelium of mucosa4.31e-079
gastrointestinal system epithelium4.31e-079
intestinal epithelium4.31e-079
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