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FFCP PHASE1:Mm9::chr5:124053684..124053715,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=56430
|EntrezGene=56430
|HGNC=
|HGNC=
|MCL_coexpression_id=39
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=12bp_to_ENSMUST00000154432_5end
|association_with_transcript=12bp_to_ENSMUST00000154432_5end
|cluster_id=chr5:124053684..124053715,-
|description=CAGE_peak_2_at_Clip1_5end
|description=CAGE_peak_2_at_Clip1_5end
|id=chr5:124053684..124053715,-
|id=chr5:124053684..124053715,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.61e-14!71;UBERON:0003075!2.61e-14!71;UBERON:0007284!2.61e-14!71;UBERON:0000955!4.11e-14!50;UBERON:0006238!4.11e-14!50;UBERON:0000033!9.65e-14!63;UBERON:0002616!1.70e-13!49;UBERON:0001049!2.15e-13!52;UBERON:0005068!2.15e-13!52;UBERON:0006241!2.15e-13!52;UBERON:0007135!2.15e-13!52;UBERON:0003080!1.99e-11!40;UBERON:0003056!5.45e-11!49;UBERON:0002780!5.83e-11!39;UBERON:0001890!5.83e-11!39;UBERON:0006240!5.83e-11!39;UBERON:0004121!6.90e-10!102;UBERON:0000924!6.90e-10!102;UBERON:0006601!6.90e-10!102;UBERON:0002020!1.39e-08!34;UBERON:0001017!1.88e-08!73;UBERON:0005743!1.88e-08!73;UBERON:0000073!3.82e-08!75;UBERON:0001016!3.82e-08!75;UBERON:0002791!8.45e-08!29;UBERON:0003528!8.45e-08!29;UBERON:0001893!8.45e-08!29;UBERON:0002021!9.30e-08!10;UBERON:0000411!9.30e-08!10;UBERON:0001950!9.30e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.33e-21,54;UBERON:0001049,6.41e-20,52;UBERON:0005068,6.41e-20,52;UBERON:0006241,6.41e-20,52;UBERON:0007135,6.41e-20,52;UBERON:0000955,1.14e-19,47;UBERON:0006238,1.14e-19,47;UBERON:0002616,1.22e-18,46;UBERON:0003080,3.05e-16,40;UBERON:0001017,7.00e-16,73;UBERON:0002780,1.87e-15,39;UBERON:0001890,1.87e-15,39;UBERON:0006240,1.87e-15,39;UBERON:0001016,4.02e-15,75;UBERON:0002346,4.08e-15,64;UBERON:0003075,4.08e-15,64;UBERON:0007284,4.08e-15,64;UBERON:0010314,2.60e-13,92;UBERON:0002020,4.04e-13,34;UBERON:0003056,1.04e-12,49;UBERON:0003528,1.05e-12,29;UBERON:0002791,1.05e-12,29;UBERON:0001893,1.05e-12,29;UBERON:0010371,1.21e-12,73;UBERON:0002021,1.67e-12,10;UBERON:0000411,1.67e-12,10;UBERON:0001950,1.67e-12,10;UBERON:0000025,3.21e-11,114;UBERON:0004111,9.56e-11,122;UBERON:0004121,3.77e-10,95;UBERON:0000924,3.77e-10,95;UBERON:0006601,3.77e-10,95;UBERON:0002619,6.78e-09,17;UBERON:0000956,5.79e-08,21;UBERON:0001869,5.79e-08,21;UBERON:0000203,5.79e-08,21;UBERON:0002048,1.73e-07,14;UBERON:0000117,1.73e-07,14;UBERON:0000171,1.73e-07,14;UBERON:0000170,1.73e-07,14;UBERON:0005597,1.73e-07,14;UBERON:0000118,1.73e-07,14
|phase1_expression=1.12104192973356,0,0,0,0,0,0,6.45616617207881,0,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0.137114433605739,0,2.97651515528744,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,1.45072428402269,0,0,0,0,0.809265843438391,0,0.633831403506179,0,0,0,0,0.7104801149461,0,0,0.311068836925433,0.540023753326763,0.420649922702764,1.42825492201902,1.10434270475807,0.61245399607477,0.0958454710182364,0,3.30347642998166,3.06449611404451,2.4577045320999,1.45074916503213,2.92760459527711,0,3.35019598801657,5.6276261003168,6.87592114995646,0.294628585473668,1.42371680799103,0.559198337475902,0.227178579999552,0.151143120213571,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0,0.845060518660083,0,0,0,0,0.253359865475099,0,0.45673551887624,1.29468941823586,8.01587550950054,0.867426633830679,1.21786191324856,2.30615497256059,3.76806601381556,3.41007250693544,5.52933001850572,0,0.722996784599558,0.884610551949874,0.808834249737046,0.441683036920787,1.45462575940567,0,19.3235326027621,12.5668024088073,0.255457055208591,0.359445373517761,0.599902730993408,0.127070227073065,3.14560342750128,10.0650132620098,1.25654352112864,11.9938780932671,10.7400492078739,5.40248915854856,6.16516799657479,0.509196819251581,0.248813941220186,0.252722758433675,0.420883711772948,0.650602214813519,0,0.540186389416048,0.30140963567143,0.204109497453984,0.768682321709099,0.655912071918102,2.58703370739016,0,0,0.175951124163949,0.219195732427575,0.556094498451196,0.696504333044333,0.61734640922383,0,0,0,0,0.621377317606506,0,0,0.23674473558521,0.393528463494808,0,0.232533944750408,0.268273401399619,0.700592054203017,0.16455984991348,0.656669856316381,0.486412857275134,0.292399974850665,0.658650345873152,1.34206418760372,10.3042074796422,1.3377599609307,0,0,0.213288250535234,0,0.128867461322093,0,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0.58489226135736,0,0.216138049874694,0.398282546508734,1.13800740571849,0.685491075658373,0,0.610953983535943,0.969762435838129,1.61312385747733,2.84564417059158,1.91893192373483,0.627994911365499,0.987177311374404,0,0,0.393117990226406,0,0,0,0,0.575392274901621,0,0,0,0,0,0,0,0.482443521363367,6.83586803616437,0.189491411770485,0,0.509235257325564,0.469380496577004,3.35012514883632,3.57065461329021,5.26860849216057,6.77831119656621,4.87222317227305,4.62418829106713,11.6342953448174,8.80693407516067,7.81104916340163,0,0,0.491764273019036,0,2.24770825982909,2.69586879162067,0,1.51482556322624,0,0,0,0,0,0.283076530788832,0,0,0,8.35435422696698,1.98716119291576,0.35613120733451,0.651547837414304,3.62934270539578,1.32745138339963,0.242780636154981,0,0.377210159511796,0,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,1.05418608574999,0,6.46835250932197,1.08036656418786,0.776152102696527,0.643011105094777,1.06404140185364,1.07021290561242,0.822745103010605,1.2178597964584,0.469343416127421,0.847328283455281,0,0.32977250588296,0.645857706783622,0.0603129249281559,0.238744688006273,0.328281799490123,0.582961673259701,2.03967832211561,0.341741761595705,0.412773735926445,0.185194527369712,0,0,0,0.169978429993855,0.419854356970974,0.276399947608848,0,0,0,0.108005340821801,0.209088296014469,0,0.269728692769641,0.495920734352016,0.26175594198403,0.129614973291793,0,3.38215763210514,0.299033092087958,0,0,0.258319646955462,0.337912250981556,0.469428954583016,0,0.314578033277133,0,0.576060012515731,0,0.405450430580328,0.924398614483445,0.25984164595559,0,0.39736270956253,0.240390899039938,0.147689527174577,0.100966449948148,0,0,0,0,0.233753804363138,0.680191150845634,0,0,0,0.965947970160952,0.563047426353546,2.19781949120718,1.07184189539533,0,9.03602948187307,12.4287813856938,19.4784474569395,6.35856774671644,9.59115527678899,6.7985450765073,4.05013500139084,7.65546045481175,5.43770890781046,6.73088405277366,0.207574695168353,0.399024873401031,0.170733605754134,0.972426868273176,0.209613162627982,0.735374033800057,1.11123363900808,1.03017528619447,0.64183841918363,1.26348605881899,0.760437899670719,1.88626341386076,0.749132059759059,0.768301828858431,0.746661096422973,0.476293691283074,0.695305955669133,0.77163688185482,0,1.76638704161277,1.02860775715625,0.887379030796687,0.238436189947321,1.45346416632329,0.752875043322645,0.592302255241736,0.73171189149109,0.789209134313529,0.543216455383447,1.68342681497322,0.949080144993393,0.886540341380071,2.45538625901814,0.619747364743864,0.771626443924566,1.24905288968973,0.935726433781634,0.429742108096597,0.382576664137687,0.661774257358546,0.463735671240843
|phase1_expression=1.12104192973356,0,0,0,0,0,0,6.45616617207881,0,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0.137114433605739,0,2.97651515528744,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,1.45072428402269,0,0,0,0,0.809265843438391,0,0.633831403506179,0,0,0,0,0.7104801149461,0,0,0.311068836925433,0.540023753326763,0.420649922702764,1.42825492201902,1.10434270475807,0.61245399607477,0.0958454710182364,0,3.30347642998166,3.06449611404451,2.4577045320999,1.45074916503213,2.92760459527711,0,3.35019598801657,5.6276261003168,6.87592114995646,0.294628585473668,1.42371680799103,0.559198337475902,0.227178579999552,0.151143120213571,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0,0.845060518660083,0,0,0,0,0.253359865475099,0,0.45673551887624,1.29468941823586,8.01587550950054,0.867426633830679,1.21786191324856,2.30615497256059,3.76806601381556,3.41007250693544,5.52933001850572,0,0.722996784599558,0.884610551949874,0.808834249737046,0.441683036920787,1.45462575940567,0,19.3235326027621,12.5668024088073,0.255457055208591,0.359445373517761,0.599902730993408,0.127070227073065,3.14560342750128,10.0650132620098,1.25654352112864,11.9938780932671,10.7400492078739,5.40248915854856,6.16516799657479,0.509196819251581,0.248813941220186,0.252722758433675,0.420883711772948,0.650602214813519,0,0.540186389416048,0.30140963567143,0.204109497453984,0.768682321709099,0.655912071918102,2.58703370739016,0,0,0.175951124163949,0.219195732427575,0.556094498451196,0.696504333044333,0.61734640922383,0,0,0,0,0.621377317606506,0,0,0.23674473558521,0.393528463494808,0,0.232533944750408,0.268273401399619,0.700592054203017,0.16455984991348,0.656669856316381,0.486412857275134,0.292399974850665,0.658650345873152,1.34206418760372,10.3042074796422,1.3377599609307,0,0,0.213288250535234,0,0.128867461322093,0,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0.58489226135736,0,0.216138049874694,0.398282546508734,1.13800740571849,0.685491075658373,0,0.610953983535943,0.969762435838129,1.61312385747733,2.84564417059158,1.91893192373483,0.627994911365499,0.987177311374404,0,0,0.393117990226406,0,0,0,0,0.575392274901621,0,0,0,0,0,0,0,0.482443521363367,6.83586803616437,0.189491411770485,0,0.509235257325564,0.469380496577004,3.35012514883632,3.57065461329021,5.26860849216057,6.77831119656621,4.87222317227305,4.62418829106713,11.6342953448174,8.80693407516067,7.81104916340163,0,0,0.491764273019036,0,2.24770825982909,2.69586879162067,0,1.51482556322624,0,0,0,0,0,0.283076530788832,0,0,0,8.35435422696698,1.98716119291576,0.35613120733451,0.651547837414304,3.62934270539578,1.32745138339963,0.242780636154981,0,0.377210159511796,0,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,1.05418608574999,0,6.46835250932197,1.08036656418786,0.776152102696527,0.643011105094777,1.06404140185364,1.07021290561242,0.822745103010605,1.2178597964584,0.469343416127421,0.847328283455281,0,0.32977250588296,0.645857706783622,0.0603129249281559,0.238744688006273,0.328281799490123,0.582961673259701,2.03967832211561,0.341741761595705,0.412773735926445,0.185194527369712,0,0,0,0.169978429993855,0.419854356970974,0.276399947608848,0,0,0,0.108005340821801,0.209088296014469,0,0.269728692769641,0.495920734352016,0.26175594198403,0.129614973291793,0,3.38215763210514,0.299033092087958,0,0,0.258319646955462,0.337912250981556,0.469428954583016,0,0.314578033277133,0,0.576060012515731,0,0.405450430580328,0.924398614483445,0.25984164595559,0,0.39736270956253,0.240390899039938,0.147689527174577,0.100966449948148,0,0,0,0,0.233753804363138,0.680191150845634,0,0,0,0.965947970160952,0.563047426353546,2.19781949120718,1.07184189539533,0,9.03602948187307,12.4287813856938,19.4784474569395,6.35856774671644,9.59115527678899,6.7985450765073,4.05013500139084,7.65546045481175,5.43770890781046,6.73088405277366,0.207574695168353,0.399024873401031,0.170733605754134,0.972426868273176,0.209613162627982,0.735374033800057,1.11123363900808,1.03017528619447,0.64183841918363,1.26348605881899,0.760437899670719,1.88626341386076,0.749132059759059,0.768301828858431,0.746661096422973,0.476293691283074,0.695305955669133,0.77163688185482,0,1.76638704161277,1.02860775715625,0.887379030796687,0.238436189947321,1.45346416632329,0.752875043322645,0.592302255241736,0.73171189149109,0.789209134313529,0.543216455383447,1.68342681497322,0.949080144993393,0.886540341380071,2.45538625901814,0.619747364743864,0.771626443924566,1.24905288968973,0.935726433781634,0.429742108096597,0.382576664137687,0.661774257358546,0.463735671240843
|short_description=p2@Clip1
|short_description=p2@Clip1
}}
}}

Latest revision as of 21:07, 1 October 2015

Short description:p2@Clip1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Clip1_5end
Coexpression cluster:MCL_coexpression_mm9:39
Association with transcript: 12bp_to_ENSMUST00000154432_5end
EntrezGene:Clip1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Clip1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.46
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.98
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.06
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.88
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D78.02
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F53.77
adrenal gland, neonate N00.CNhs11191.1311-23C13.41
adrenal gland, neonate N25.CNhs11223.1377-27I35.53
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B219.32
cerebellum, neonate N30.CNhs11135.1395-42I212.57
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D810.07
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D511.99
cortex, neonate N30.CNhs11107.1392-42F210.74
diencephalon, adult.CNhs10482.20-12F25.40
diencephalon, neonate N30.CNhs11201.1388-42B26.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D21.34
hippocampus, adult.CNhs10478.13-16E810.30
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.61
kidney, neonate N10.CNhs11206.758-6D52.85
kidney, neonate N20.CNhs11113.832-19I11.92
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B16.84
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A63.35
lung, embryo E18.CNhs10583.1287-20I63.57
lung, neonate N00.CNhs11224.640-42C65.27
lung, neonate N06.CNhs11212.683-20E56.78
lung, neonate N07.CNhs11111.715-19A34.87
lung, neonate N10.CNhs11219.750-23E64.62
lung, neonate N20.CNhs11109.822-18A411.63
lung, neonate N25.CNhs11119.1359-25C78.81
lung, neonate N30.CNhs11133.1394-42H27.81
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A32.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I98.35
ovary, adult.CNhs10507.91-2I71.99
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G63.63
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E52.20
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.43
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A319.48
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.36
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.33e-2154
neural tube6.41e-2052
neural rod6.41e-2052
future spinal cord6.41e-2052
neural keel6.41e-2052
brain1.14e-1947
future brain1.14e-1947
regional part of brain1.22e-1846
anterior neural tube3.05e-1640
central nervous system7.00e-1673
regional part of forebrain1.87e-1539
forebrain1.87e-1539
future forebrain1.87e-1539
nervous system4.02e-1575
neurectoderm4.08e-1564
neural plate4.08e-1564
presumptive neural plate4.08e-1564
structure with developmental contribution from neural crest2.60e-1392
gray matter4.04e-1334
pre-chordal neural plate1.04e-1249
brain grey matter1.05e-1229
regional part of telencephalon1.05e-1229
telencephalon1.05e-1229
ecto-epithelium1.21e-1273
occipital lobe1.67e-1210
visual cortex1.67e-1210
neocortex1.67e-1210
tube3.21e-11114
anatomical conduit9.56e-11122
ectoderm-derived structure3.77e-1095
ectoderm3.77e-1095
presumptive ectoderm3.77e-1095
regional part of cerebral cortex6.78e-0917
cerebral cortex5.79e-0821
cerebral hemisphere5.79e-0821
pallium5.79e-0821
lung1.73e-0714
respiratory tube1.73e-0714
respiration organ1.73e-0714
pair of lungs1.73e-0714
lung primordium1.73e-0714
lung bud1.73e-0714
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