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FFCP PHASE1:Mm9::chr6:88825029..88825047,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=319655
|EntrezGene=319655
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=D3YW47
|UniProt=D3YW47
|association_with_transcript=0bp_to_ENSMUST00000145944_5end
|association_with_transcript=0bp_to_ENSMUST00000145944_5end
|cluster_id=chr6:88825029..88825047,-
|description=CAGE_peak_2_at_Podxl2_5end
|description=CAGE_peak_2_at_Podxl2_5end
|id=chr6:88825029..88825047,-
|id=chr6:88825029..88825047,-
|ontology_enrichment_celltype=CL:0000221!2.57e-19!44;CL:0000133!2.57e-19!44;CL:0002319!5.18e-19!43;CL:0000540!2.77e-18!33;CL:0000047!2.77e-18!33;CL:0000031!2.77e-18!33;CL:0000404!2.77e-18!33;CL:0000055!1.45e-16!50;CL:0000393!2.06e-16!39;CL:0000211!2.06e-16!39;CL:0000117!6.32e-16!23;CL:0000337!6.32e-16!23
|ontology_enrichment_celltype=CL:0000221!2.57e-19!44;CL:0000133!2.57e-19!44;CL:0002319!5.18e-19!43;CL:0000540!2.77e-18!33;CL:0000047!2.77e-18!33;CL:0000031!2.77e-18!33;CL:0000404!2.77e-18!33;CL:0000055!1.45e-16!50;CL:0000393!2.06e-16!39;CL:0000211!2.06e-16!39;CL:0000117!6.32e-16!23;CL:0000337!6.32e-16!23
|ontology_enrichment_celltype_v019_2=CL:0000221,7.32e-20,44;CL:0000133,7.32e-20,44;CL:0002319,1.51e-19,43;CL:0000540,8.49e-19,33;CL:0000047,8.49e-19,33;CL:0000031,8.49e-19,33;CL:0000404,8.49e-19,33;CL:0000393,1.39e-16,39;CL:0000211,1.39e-16,39;CL:0000117,2.29e-16,23;CL:0000337,2.29e-16,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!9.42e-37!73;UBERON:0005743!9.42e-37!73;UBERON:0000073!1.87e-35!75;UBERON:0001016!1.87e-35!75;UBERON:0004121!8.62e-34!102;UBERON:0000924!8.62e-34!102;UBERON:0006601!8.62e-34!102;UBERON:0002346!4.56e-29!71;UBERON:0003075!4.56e-29!71;UBERON:0007284!4.56e-29!71;UBERON:0000033!1.22e-26!63;UBERON:0001049!1.76e-26!52;UBERON:0005068!1.76e-26!52;UBERON:0006241!1.76e-26!52;UBERON:0007135!1.76e-26!52;UBERON:0000955!6.20e-25!50;UBERON:0006238!6.20e-25!50;UBERON:0002616!2.56e-24!49;UBERON:0003056!2.55e-21!49;UBERON:0003080!2.28e-19!40;UBERON:0002780!9.33e-19!39;UBERON:0001890!9.33e-19!39;UBERON:0006240!9.33e-19!39;UBERON:0002020!1.65e-18!34;UBERON:0002791!2.80e-15!29;UBERON:0003528!2.80e-15!29;UBERON:0001893!2.80e-15!29;UBERON:0000153!4.29e-13!94;UBERON:0007811!1.33e-12!86;UBERON:0000956!2.29e-10!21;UBERON:0001869!2.29e-10!21;UBERON:0000203!2.29e-10!21;UBERON:0000468!2.09e-09!333;UBERON:0000025!5.00e-09!114;UBERON:0004111!2.29e-08!122;UBERON:0002619!3.45e-08!17;UBERON:0003076!1.26e-07!12;UBERON:0003057!1.26e-07!12;UBERON:0000922!3.30e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.73e-38,73;UBERON:0001016,1.68e-36,75;UBERON:0004121,4.65e-34,95;UBERON:0000924,4.65e-34,95;UBERON:0006601,4.65e-34,95;UBERON:0002346,1.04e-30,64;UBERON:0003075,1.04e-30,64;UBERON:0007284,1.04e-30,64;UBERON:0000073,1.22e-28,54;UBERON:0010371,2.67e-27,73;UBERON:0001049,3.01e-27,52;UBERON:0005068,3.01e-27,52;UBERON:0006241,3.01e-27,52;UBERON:0007135,3.01e-27,52;UBERON:0010314,6.46e-27,92;UBERON:0000955,1.06e-23,47;UBERON:0006238,1.06e-23,47;UBERON:0002616,4.46e-23,46;UBERON:0003056,6.31e-22,49;UBERON:0003080,6.46e-20,40;UBERON:0002780,2.77e-19,39;UBERON:0001890,2.77e-19,39;UBERON:0006240,2.77e-19,39;UBERON:0002020,4.97e-19,34;UBERON:0003528,1.06e-15,29;UBERON:0002791,1.06e-15,29;UBERON:0001893,1.06e-15,29;UBERON:0000956,1.23e-10,21;UBERON:0001869,1.23e-10,21;UBERON:0000203,1.23e-10,21;UBERON:0000025,5.95e-09,114;UBERON:0002619,2.16e-08,17;UBERON:0004111,2.85e-08,122;UBERON:0003076,8.19e-08,12;UBERON:0003057,8.19e-08,12;UBERON:0000922,7.60e-07,320
|phase1_expression=13.9329496981171,0,0,0,0,0.503637815735669,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,4.93251082876205,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.41356317294982,7.29913904780505,5.13930906052708,35.9900018400098,8.06693078607652,3.73466510648602,5.05517737593137,5.87942970826523,12.9377307928474,0,0,0,1.54355661621568,2.0057340795713,0.515672092277442,49.9721658323206,42.8482693210347,41.8328726314078,5.08266798103698,6.22506357277798,0.899899717281399,0.988866362566974,1.4209602298922,13.1824048628098,17.28982373947,32.8696071017874,37.6666567945417,28.8145197051393,30.564655331207,28.0503047008549,30.2552274060936,29.999632428708,42.284064184061,27.5289702498472,25.4097802789524,24.7306518542552,44.8413378282659,48.5799387528795,45.3194632384381,36.2937898701795,43.895483582471,30.2540530598084,34.4715445004191,28.9014512022179,44.7358669980721,1.06016670666458,1.66257432234928,0,0,0,0,0,0,1.68533304158102,0,0,0,8.45060518660083,0,0,0,0,0,0,0.5709193985953,0.258937883647172,6.97678053604676,6.41895709034703,3.34912026143355,3.22861696158482,3.91878865436819,4.46837087115678,2.89033160058254,2.47194967734374,0.433798070759735,0,4.36770494858005,3.5334642953663,1.45462575940567,0,11.4184510834503,15.2896095973822,0.510914110417183,0,0,0.127070227073065,28.0108495687018,7.77751024791665,63.4554478169965,11.9938780932671,17.1329356411321,17.8697718321222,16.710850095979,10.2857757488819,1.36847667671102,1.76905930903572,1.47309299120532,6.76626303406059,9.42598628177239,7.92273371143537,9.64510834148576,14.1515918234762,11.6583485459213,16.2103983488331,5.43277078551933,3.66465587985832,7.75334928688059,9.67731182901719,10.302199424096,5.56094498451196,3.48252166522167,2.26360350048738,6.56813080501028,0,0,0,2.89976081549703,3.04883877975425,4.50155153652537,6.15536312521547,3.73852040320067,4.01094493507183,1.62773761325285,3.21928081679543,4.43708300995244,5.75959474697182,5.91002870684743,4.62092214411378,2.92399974850665,3.29325172936576,1.74468344388483,9.46304768538573,38.3834204174731,0,0,5.97207101498655,6.27039014023184,3.99489130098489,3.42861991859682,2.89091456998331,2.47293313946327,0.474529061544512,2.79988223030818,4.27269854960458,5.57078121715222,5.8489226135736,0.898819408654221,0.432276099749388,0.199141273254367,3.41402221715547,2.85621281524322,1.1270773567308,3.05476991767971,4.26695471768777,3.64706263429657,3.92066530170395,0.442830443938806,0.31399745568275,0.370191491765402,0,0.667380422864376,0.393117990226406,0.449724224769707,0,0.241177159752417,0,0,0.162135226775035,0.274561413188081,0,1.48856379067401,1.5601883655728,0.252578877947112,0,0,0,7.95863929436036,2.93336957595647,3.05541154395339,1.87752198630802,2.1775813467436,1.42826184531608,1.95133647857799,4.25614889086716,8.858587585951,10.2051051940792,0.983179888294428,2.07221978239075,1.3018415272336,0,0,0.491764273019036,0.275936746304732,19.266070798535,18.9882932279369,0.163934945376675,1.76729649043061,8.20321370482267,8.98009111882268,13.1408272617007,6.4521575447189,8.24355094104858,8.49229592366497,7.69140333182299,7.59865230569411,8.30104333687699,21.2072068838393,1.70328102249922,12.1084610493734,11.4020871547503,4.61916344323099,0,2.18502572539483,4.53485335447127,1.69744571780308,2.36241514304618,2.76691633149535,3.35956781118687,2.54473610634254,2.85197902707777,1.8962205476149,0,0,7.14923172082955,6.48219938512717,8.92574918101006,11.3598628566744,7.80297028026004,10.3453914209201,10.3665882979336,14.9187825066154,0,0.63549621259146,0.220528398054962,0.8244312647074,3.71368181400583,3.37752379597673,2.98430860007841,1.80554989719567,1.45740418314925,17.2445530869774,0,4.74689796315412,1.48155621895769,0.753473828018764,0.27338845544205,0,0,0,0,0,4.58687190692646,5.28630614529807,3.88819226958485,2.09088296014469,2.62035076495413,2.29269388854195,4.71124697634415,0.523511883968059,0.259229946583586,1.24267862617385,0,4.03694674318743,7.2801735801123,5.05573089694524,6.45799117388655,7.26511339610346,7.74557775061976,6.51021924219751,2.62148361064277,0.724752362478018,1.72818003754719,0,2.22997736819181,1.43795340030758,0.25984164595559,0.716106782669926,0.596044064343795,1.44234539423963,1.18151621739662,0.908698049533329,0.838274873204998,1.31074040677893,0.877120926657772,0.384847366561318,1.28564592399726,1.36038230169127,0,0,0,1.73870634628971,0.375364950902364,2.38097111547445,1.50057865355346,0,15.2482997506608,12.4287813856938,13.1765968091061,16.1541991403066,15.7568979547248,14.3524840504043,12.1504050041725,12.158672487054,23.1102628581944,14.497288729051,1.764384908931,3.99024873401031,9.90254913373978,5.59145449257076,3.14419743941973,4.59608771125035,7.3341420174533,7.2112270033613,4.81378814387723,6.57012750585873,6.08350319736575,5.47016390019621,7.11675456771106,7.04276676453562,7.75378830900779,10.0021675169445,9.38663040153329,8.10218725947561,5.76920261124629,4.41596760403192,4.4573002810104,4.96932257246145,5.96090474868302,8.43009216467505,5.55245344450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|short_description=p2@Podxl2
|short_description=p2@Podxl2
}}
}}

Latest revision as of 21:30, 1 October 2015

Short description:p2@Podxl2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Podxl2_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 0bp_to_ENSMUST00000145944_5end
EntrezGene:Podxl2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Podxl2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G713.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.41
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.14
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B735.99
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.07
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.73
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.06
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.88
Mouse Astrocytes, donor3.CNhs12107.11633-122C412.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C349.97
Mouse Granule cells, donor2.CNhs12357.11731-123E342.85
Mouse Granule cells, donor3.CNhs12108.11636-122C741.83
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.08
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C813.18
Mouse Microglia, donor2.CNhs12634.11736-123E817.29
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D532.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F537.67
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D928.81
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F130.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D528.05
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D230.26
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F230.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D642.28
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D327.53
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F325.41
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D724.73
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D444.84
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F448.58
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D845.32
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E436.29
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E543.90
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I630.25
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D634.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F628.90
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E144.74
Mouse Schwann, donor1.CNhs12507.11728-123D91.06
Mouse Schwann, donor2.CNhs12573.11746-123F91.66
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.45
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D76.98
adrenal gland, embryo E14.CNhs11038.406-44C56.42
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I13.23
adrenal gland, embryo E18.CNhs11026.1262-18F53.92
adrenal gland, neonate N00.CNhs11191.1311-23C14.47
adrenal gland, neonate N25.CNhs11223.1377-27I32.89
amnion, adult pregnant day17.5.CNhs10488.583-22A82.47
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F54.37
bone (os femoris), neonate N16.CNhs11225.1525-43A63.53
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B211.42
cerebellum, neonate N30.CNhs11135.1395-42I215.29
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A428.01
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F163.46
cortex, adult.CNhs10473.12-14D511.99
cortex, neonate N30.CNhs11107.1392-42F217.13
diencephalon, adult.CNhs10482.20-12F217.87
diencephalon, neonate N30.CNhs11201.1388-42B216.71
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B110.29
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C66.77
eyeball, embryo E14.CNhs10521.399-16E29.43
eyeball, embryo E15.CNhs10593.426-16C97.92
eyeball, embryo E17.CNhs11023.1261-18D49.65
eyeball, neonate N00.CNhs11207.633-15C614.15
eyeball, neonate N01.CNhs11140.1532-43E711.66
eyeball, neonate N02.CNhs11205.1551-44G816.21
eyeball, neonate N16.CNhs11188.777-19A25.43
forelimb, embryo E11.CNhs10596.335-25E23.66
forelimb, embryo E12.CNhs10600.359-14H27.75
forelimb, embryo E13.CNhs10589.384-1E29.68
forelimb, embryo E14.CNhs10577.413-26A810.30
forelimb, embryo E15.CNhs11007.437-20E75.56
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B52.26
gonad, embryo E13.CNhs11044.1564-45I66.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I94.50
heart, embryo E14.CNhs10597.403-26D46.16
heart, embryo E15.CNhs11017.431-16C83.74
heart, embryo E16.CNhs11021.457-17C64.01
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G33.22
heart, neonate N00.CNhs11213.639-21E34.44
heart, neonate N03.CNhs11221.1349-25I25.76
heart, neonate N10.CNhs11118.749-24G15.91
heart, neonate N16.CNhs11209.782-15G14.62
heart, neonate N20.CNhs11127.821-26I62.92
heart, neonate N25.CNhs11196.1351-25D33.29
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E89.46
hippocampus, neonate N00.CNhs11228.627-43G138.38
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I55.97
intestine, embryo E13.CNhs11010.381-16D56.27
intestine, embryo E15.CNhs10602.976-16D83.99
intestine, embryo E16.CNhs10585.463-22H43.43
intestine, embryo E17.CNhs10582.482-18D32.89
intestine, embryo E18.CNhs10526.1289-20F72.47
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E92.80
intestine, neonate N06.CNhs11102.688-20B84.27
intestine, neonate N07.CNhs11095.720-20F25.57
intestine, neonate N10.CNhs11098.755-23A55.85
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I93.41
kidney, embryo E15.CNhs10997.434-16F82.86
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I23.05
kidney, embryo E18.CNhs11001.1288-20C74.27
kidney, neonate N00.CNhs11214.646-21G73.65
kidney, neonate N10.CNhs11206.758-6D53.92
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G27.96
lung, embryo E14.CNhs10604.404-26F82.93
lung, embryo E15.CNhs11020.432-17C53.06
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A62.18
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E54.26
lung, neonate N07.CNhs11111.715-19A38.86
lung, neonate N10.CNhs11219.750-23E610.21
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H21.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C219.27
medulla oblongata, neonate N30.CNhs11200.1396-42A318.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.20
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.98
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E313.14
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.45
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.24
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D98.49
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.69
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.60
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.30
olfactory brain, adult.CNhs10489.18-22I921.21
ovary, adult.CNhs10507.91-2I71.70
ovary, embryo E18.CNhs11040.505-44H712.11
ovary, neonate N00.CNhs11217.1299-22I411.40
oviduct, adult pregnant day01.CNhs10500.988-6G64.62
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F24.53
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E66.48
pituitary gland, embryo E13.CNhs11009.370-44C78.93
pituitary gland, embryo E14.CNhs11037.398-44A511.36
pituitary gland, embryo E15.CNhs10592.427-16B97.80
pituitary gland, embryo E16.CNhs11036.449-43F610.35
pituitary gland, embryo E17.CNhs11039.1265-44F510.37
pituitary gland, neonate N00.CNhs11190.1308-22E914.92
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G43.71
skin, neonate N03.CNhs11215.662-22H33.38
skin, neonate N06.CNhs11097.693-20I52.98
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C917.24
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C14.75
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E34.59
stomach, embryo E15.CNhs10603.1252-16G85.29
stomach, embryo E16.CNhs11022.459-17D43.89
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B82.29
stomach, neonate N07.CNhs11210.718-18A94.71
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F54.04
testis, embryo E15.CNhs11034.443-27C57.28
testis, embryo E16.CNhs11033.470-26G55.06
testis, embryo E17.CNhs11029.486-18I56.46
testis, embryo E18.CNhs11027.503-18G57.27
testis, neonate N00.CNhs11189.1300-22B77.75
testis, neonate N07.CNhs11222.726-26I46.51
testis, neonate N10.CNhs11204.763-44D92.62
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I42.23
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F81.44
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C40.91
thymus, neonate N07.CNhs11211.713-19D30.84
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.25
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.43
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.18
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.15
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.16
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A823.11
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A914.50
whole body, embryo E11.CNhs11014.324-5I81.76
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H29.90
whole body, embryo E14.5.CNhs10578.420-27D25.59
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F24.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.08
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.47
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.04
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.97
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.43
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.55
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.33
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.84
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.58
whole body, embryo E17.5.CNhs10513.490-9F97.14
whole body, embryo E17.CNhs10517.475-3I515.24
whole body, embryo E18.CNhs10516.493-3B36.78
whole body, neonate N00.CNhs10525.657-19C26.23
whole body, neonate N01.CNhs10576.659-23C64.59
whole body, neonate N06.CNhs10515.692-21D14.19
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell7.32e-2044
neurectodermal cell7.32e-2044
neural cell1.51e-1943
neuron8.49e-1933
neuronal stem cell8.49e-1933
neuroblast8.49e-1933
electrically signaling cell8.49e-1933
electrically responsive cell1.39e-1639
electrically active cell1.39e-1639
CNS neuron (sensu Vertebrata)2.29e-1623
neuroblast (sensu Vertebrata)2.29e-1623

Uber anatomy
Ontology termp-valuen
central nervous system7.73e-3873
nervous system1.68e-3675
ectoderm-derived structure4.65e-3495
ectoderm4.65e-3495
presumptive ectoderm4.65e-3495
neurectoderm1.04e-3064
neural plate1.04e-3064
presumptive neural plate1.04e-3064
regional part of nervous system1.22e-2854
ecto-epithelium2.67e-2773
neural tube3.01e-2752
neural rod3.01e-2752
future spinal cord3.01e-2752
neural keel3.01e-2752
structure with developmental contribution from neural crest6.46e-2792
brain1.06e-2347
future brain1.06e-2347
regional part of brain4.46e-2346
pre-chordal neural plate6.31e-2249
anterior neural tube6.46e-2040
regional part of forebrain2.77e-1939
forebrain2.77e-1939
future forebrain2.77e-1939
gray matter4.97e-1934
brain grey matter1.06e-1529
regional part of telencephalon1.06e-1529
telencephalon1.06e-1529
cerebral cortex1.23e-1021
cerebral hemisphere1.23e-1021
pallium1.23e-1021
tube5.95e-09114
regional part of cerebral cortex2.16e-0817
anatomical conduit2.85e-08122
posterior neural tube8.19e-0812
chordal neural plate8.19e-0812
embryo7.60e-07320
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