Personal tools

FFCP PHASE1:Mm9::chr5:129458922..129458941,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr5:129458922..129458941,-
|DHSsupport=NA
|short_description=p1@Rimbp2
|DPIdataset=NA
|description=CAGE_peak_1_at_Rimbp2_5end
|association_with_transcript=295bp_to_ENSMUST00000031370,ENSMUST00000111346,NM_001081388,uc008zsl.1,uc008zsm.1,uc012edx.1_5end
|EntrezGene=231760
|EntrezGene=231760
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q80U40,D3YXR8
|UniProt=Q80U40,D3YXR8
|association_with_transcript=295bp_to_ENSMUST00000031370,ENSMUST00000111346,NM_001081388,uc008zsl.1,uc008zsm.1,uc012edx.1_5end
|cluster_id=chr5:129458922..129458941,-
|description=CAGE_peak_1_at_Rimbp2_5end
|id=chr5:129458922..129458941,-
|ontology_enrichment_celltype=CL:0000117!8.43e-14!23;CL:0000337!8.43e-14!23;CL:0000540!1.91e-11!33;CL:0000047!1.91e-11!33;CL:0000031!1.91e-11!33;CL:0000404!1.91e-11!33;CL:0000393!9.46e-08!39;CL:0000211!9.46e-08!39;CL:0000221!8.32e-07!44;CL:0000133!8.32e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000117,1.03e-17,23;CL:0000337,1.03e-17,23;CL:0000540,1.41e-11,33;CL:0000047,1.41e-11,33;CL:0000031,1.41e-11,33;CL:0000404,1.41e-11,33;CL:0000393,1.62e-08,39;CL:0000211,1.62e-08,39;CL:0000221,3.21e-07,44;CL:0000133,3.21e-07,44;CL:0002319,5.23e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.20e-30!71;UBERON:0003075!1.20e-30!71;UBERON:0007284!1.20e-30!71;UBERON:0001049!4.40e-25!52;UBERON:0005068!4.40e-25!52;UBERON:0006241!4.40e-25!52;UBERON:0007135!4.40e-25!52;UBERON:0000033!6.60e-25!63;UBERON:0001017!8.71e-25!73;UBERON:0005743!8.71e-25!73;UBERON:0000073!2.23e-24!75;UBERON:0001016!2.23e-24!75;UBERON:0000955!5.44e-24!50;UBERON:0006238!5.44e-24!50;UBERON:0004121!1.02e-23!102;UBERON:0000924!1.02e-23!102;UBERON:0006601!1.02e-23!102;UBERON:0002616!3.46e-23!49;UBERON:0003056!5.58e-23!49;UBERON:0003080!4.48e-21!40;UBERON:0002780!2.56e-20!39;UBERON:0001890!2.56e-20!39;UBERON:0006240!2.56e-20!39;UBERON:0002020!5.60e-19!34;UBERON:0002791!7.26e-16!29;UBERON:0003528!7.26e-16!29;UBERON:0001893!7.26e-16!29;UBERON:0007811!1.85e-12!86;UBERON:0000956!4.41e-11!21;UBERON:0001869!4.41e-11!21;UBERON:0000203!4.41e-11!21;UBERON:0000153!8.96e-10!94;UBERON:0002619!3.58e-09!17;UBERON:0002021!5.72e-09!10;UBERON:0000411!5.72e-09!10;UBERON:0001950!5.72e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.90e-34,54;UBERON:0001049,6.37e-32,52;UBERON:0005068,6.37e-32,52;UBERON:0006241,6.37e-32,52;UBERON:0007135,6.37e-32,52;UBERON:0002346,6.83e-31,64;UBERON:0003075,6.83e-31,64;UBERON:0007284,6.83e-31,64;UBERON:0001017,2.82e-29,73;UBERON:0001016,6.26e-28,75;UBERON:0000955,1.04e-27,47;UBERON:0006238,1.04e-27,47;UBERON:0002616,1.12e-26,46;UBERON:0010371,1.28e-26,73;UBERON:0003056,5.11e-26,49;UBERON:0003080,5.73e-26,40;UBERON:0002020,3.17e-25,34;UBERON:0002780,5.59e-25,39;UBERON:0001890,5.59e-25,39;UBERON:0006240,5.59e-25,39;UBERON:0004121,4.65e-24,95;UBERON:0000924,4.65e-24,95;UBERON:0006601,4.65e-24,95;UBERON:0010314,1.20e-23,92;UBERON:0003528,4.31e-21,29;UBERON:0002791,4.31e-21,29;UBERON:0001893,4.31e-21,29;UBERON:0000956,9.63e-15,21;UBERON:0001869,9.63e-15,21;UBERON:0000203,9.63e-15,21;UBERON:0002619,3.20e-12,17;UBERON:0002021,2.44e-11,10;UBERON:0000411,2.44e-11,10;UBERON:0001950,2.44e-11,10;UBERON:0002420,1.56e-07,8;UBERON:0007245,1.56e-07,8;UBERON:0010009,1.56e-07,8;UBERON:0010011,1.56e-07,8;UBERON:0000454,1.56e-07,8
|phase1_expression=1.92178616525753,0,0,0,0,1.6787927191189,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14660173558958,0,0,0,0,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46254444320914,7.40587370980846,9.50747105259269,0,0,0,0,0.7104801149461,0,0,1.97010263386108,3.64516033495565,2.94454945891935,7.14127461009509,7.50953039235486,3.67472397644862,2.1086003624012,5.51531271966013,15.4162233399144,8.2996769755372,9.83081812839958,6.3305418110493,8.05091263701205,5.2091337055676,6.97957497503452,10.6924895906019,10.2374826010463,9.42811473515737,10.8202477407318,6.33758115806022,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,1.12674735821344,0,0,0,0,0,0,0.34255163915718,0,2.3750742250372,2.60227990149204,2.43572382649713,2.07553947530453,2.86373017049983,2.58695155698551,0.628332956648377,0,0,0,0,0,0,0,1.17112318804619,2.72280718857492,0,0,0,0,16.7765516133401,13.7250180845588,6.53402630986895,25.0307021076878,24.8043993610421,14.3373750746096,14.9261962022337,0,0,0,1.26265113531884,0.650602214813519,0.229902104433473,0.540186389416048,1.05493372485001,2.9255694635071,2.69038812598185,2.15513966487376,4.9153640440413,0,0,0,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0.621377317606506,0.234526059981096,0,0.23674473558521,0.393528463494808,0.617068451549513,0.232533944750408,1.07309360559848,0.116765342367169,0.16455984991348,0,0,0,0,0,39.1139304329277,6.48299057989492,0,0.264450566663544,0.853153002140936,0,0.515469845288373,0.605050573870028,0.444756087689741,0.951128130562796,0.474529061544512,0.329397909448022,0.502670417600539,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0.398282546508734,0,0.342745537829186,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0.509235257325564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3990918891332,10.9006868530749,0,0,1.26203287766503,0.780877488593277,0.861693590931196,0.477937595905104,0,0,0.809621403349789,0,0.395287777946524,23.4564560987919,0,0,0,0.164970122972535,0,2.18502572539483,1.81394134178851,1.32023555829129,0.885905678642318,3.68922177532713,4.13485269069154,2.90826983582004,3.92147116223193,1.8962205476149,0,0,11.234506989875,0.540183282093931,0.646793418913773,1.71469628025274,4.07882537377229,3.21063871683727,5.26556865926787,7.30715877875038,0,0,0,0,0,0,0,0,1.45740418314925,10.5692422145991,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0,0.218362563746178,0.404593039154462,0.330613822901344,0.785267825952089,0.259229946583586,0,0,0,0.330916980914195,0,0,0.168956125490778,0.234714477291508,2.0832701575032,0.419437377702843,0,0,0,0.405450430580328,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0.428736758158132,0,25.9785847603851,23.9369122983732,19.4784474569395,16.497905504994,28.773465830367,30.9711497929777,22.2757425076496,21.1650965515384,26.2822597210839,23.2992140288319,0.31136204275253,1.19707462020309,3.07320490357441,0.972426868273176,2.09613162627982,1.83843508450014,2.22246727801615,1.64828045791115,1.28367683836726,1.76888048234658,2.5347929989024,0.943131706930381,1.591905626988,1.98477972455095,1.60819313075717,2.38146845641537,1.39061191133827,1.54327376370964,1.23625770240992,2.20798380201596,2.05721551431249,2.8396128985494,0.715308569841963,2.0348498328526,1.50575008664529,2.45382362885862,1.82927972872773,1.57841826862706,1.7654534799962,2.24456908663095,1.42362021749009,1.37906275325789,0.818462086339379,1.85924209423159,0.964533054905707,3.74715866906919,1.63752125911786,1.07435527024149,1.72159498861959,0.441182838239031,0.463735671240843
|phase1_expression=1.92178616525753,0,0,0,0,1.6787927191189,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14660173558958,0,0,0,0,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46254444320914,7.40587370980846,9.50747105259269,0,0,0,0,0.7104801149461,0,0,1.97010263386108,3.64516033495565,2.94454945891935,7.14127461009509,7.50953039235486,3.67472397644862,2.1086003624012,5.51531271966013,15.4162233399144,8.2996769755372,9.83081812839958,6.3305418110493,8.05091263701205,5.2091337055676,6.97957497503452,10.6924895906019,10.2374826010463,9.42811473515737,10.8202477407318,6.33758115806022,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,1.12674735821344,0,0,0,0,0,0,0.34255163915718,0,2.3750742250372,2.60227990149204,2.43572382649713,2.07553947530453,2.86373017049983,2.58695155698551,0.628332956648377,0,0,0,0,0,0,0,1.17112318804619,2.72280718857492,0,0,0,0,16.7765516133401,13.7250180845588,6.53402630986895,25.0307021076878,24.8043993610421,14.3373750746096,14.9261962022337,0,0,0,1.26265113531884,0.650602214813519,0.229902104433473,0.540186389416048,1.05493372485001,2.9255694635071,2.69038812598185,2.15513966487376,4.9153640440413,0,0,0,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0.621377317606506,0.234526059981096,0,0.23674473558521,0.393528463494808,0.617068451549513,0.232533944750408,1.07309360559848,0.116765342367169,0.16455984991348,0,0,0,0,0,39.1139304329277,6.48299057989492,0,0.264450566663544,0.853153002140936,0,0.515469845288373,0.605050573870028,0.444756087689741,0.951128130562796,0.474529061544512,0.329397909448022,0.502670417600539,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0.398282546508734,0,0.342745537829186,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0.509235257325564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3990918891332,10.9006868530749,0,0,1.26203287766503,0.780877488593277,0.861693590931196,0.477937595905104,0,0,0.809621403349789,0,0.395287777946524,23.4564560987919,0,0,0,0.164970122972535,0,2.18502572539483,1.81394134178851,1.32023555829129,0.885905678642318,3.68922177532713,4.13485269069154,2.90826983582004,3.92147116223193,1.8962205476149,0,0,11.234506989875,0.540183282093931,0.646793418913773,1.71469628025274,4.07882537377229,3.21063871683727,5.26556865926787,7.30715877875038,0,0,0,0,0,0,0,0,1.45740418314925,10.5692422145991,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0,0.218362563746178,0.404593039154462,0.330613822901344,0.785267825952089,0.259229946583586,0,0,0,0.330916980914195,0,0,0.168956125490778,0.234714477291508,2.0832701575032,0.419437377702843,0,0,0,0.405450430580328,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0.428736758158132,0,25.9785847603851,23.9369122983732,19.4784474569395,16.497905504994,28.773465830367,30.9711497929777,22.2757425076496,21.1650965515384,26.2822597210839,23.2992140288319,0.31136204275253,1.19707462020309,3.07320490357441,0.972426868273176,2.09613162627982,1.83843508450014,2.22246727801615,1.64828045791115,1.28367683836726,1.76888048234658,2.5347929989024,0.943131706930381,1.591905626988,1.98477972455095,1.60819313075717,2.38146845641537,1.39061191133827,1.54327376370964,1.23625770240992,2.20798380201596,2.05721551431249,2.8396128985494,0.715308569841963,2.0348498328526,1.50575008664529,2.45382362885862,1.82927972872773,1.57841826862706,1.7654534799962,2.24456908663095,1.42362021749009,1.37906275325789,0.818462086339379,1.85924209423159,0.964533054905707,3.74715866906919,1.63752125911786,1.07435527024149,1.72159498861959,0.441182838239031,0.463735671240843
|short_description=p1@Rimbp2
}}
}}

Latest revision as of 22:35, 1 October 2015

Short description:p1@Rimbp2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rimbp2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 295bp_to_ENSMUST00000031370, ENSMUST00000111346, NM_001081388, uc008zsl.1, uc008zsm.1, uc012edx.1_5end
EntrezGene:Rimbp2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rimbp2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.15
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.46
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.65
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.51
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.67
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.11
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.83
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.33
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.05
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.98
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.24
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.43
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.82
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.34
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.38
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F52.86
adrenal gland, neonate N00.CNhs11191.1311-23C12.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A416.78
corpus striatum, adult.CNhs10487.19-21D813.73
corpus striatum, neonate N00.CNhs11226.630-43F16.53
cortex, adult.CNhs10473.12-14D525.03
cortex, neonate N30.CNhs11107.1392-42F224.80
diencephalon, adult.CNhs10482.20-12F214.34
diencephalon, neonate N30.CNhs11201.1388-42B214.93
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C62.93
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G82.16
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E839.11
hippocampus, neonate N00.CNhs11228.627-43G16.48
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C211.40
medulla oblongata, neonate N30.CNhs11200.1396-42A310.90
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I923.46
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G94.13
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D83.92
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G811.23
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B94.08
pituitary gland, embryo E16.CNhs11036.449-43F63.21
pituitary gland, embryo E17.CNhs11039.1265-44F55.27
pituitary gland, neonate N00.CNhs11190.1308-22E97.31
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C910.57
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I42.08
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A125.98
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A223.94
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A319.48
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.50
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A428.77
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A530.97
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A622.28
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A721.17
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A826.28
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A923.30
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H23.07
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.03e-1723
neuroblast (sensu Vertebrata)1.03e-1723
neuron1.41e-1133
neuronal stem cell1.41e-1133
neuroblast1.41e-1133
electrically signaling cell1.41e-1133
electrically responsive cell1.62e-0839
electrically active cell1.62e-0839
ectodermal cell3.21e-0744
neurectodermal cell3.21e-0744
neural cell5.23e-0743

Uber anatomy
Ontology termp-valuen
regional part of nervous system7.90e-3454
neural tube6.37e-3252
neural rod6.37e-3252
future spinal cord6.37e-3252
neural keel6.37e-3252
neurectoderm6.83e-3164
neural plate6.83e-3164
presumptive neural plate6.83e-3164
central nervous system2.82e-2973
nervous system6.26e-2875
brain1.04e-2747
future brain1.04e-2747
regional part of brain1.12e-2646
ecto-epithelium1.28e-2673
pre-chordal neural plate5.11e-2649
anterior neural tube5.73e-2640
gray matter3.17e-2534
regional part of forebrain5.59e-2539
forebrain5.59e-2539
future forebrain5.59e-2539
ectoderm-derived structure4.65e-2495
ectoderm4.65e-2495
presumptive ectoderm4.65e-2495
structure with developmental contribution from neural crest1.20e-2392
brain grey matter4.31e-2129
regional part of telencephalon4.31e-2129
telencephalon4.31e-2129
cerebral cortex9.63e-1521
cerebral hemisphere9.63e-1521
pallium9.63e-1521
regional part of cerebral cortex3.20e-1217
occipital lobe2.44e-1110
visual cortex2.44e-1110
neocortex2.44e-1110
basal ganglion1.56e-078
nuclear complex of neuraxis1.56e-078
aggregate regional part of brain1.56e-078
collection of basal ganglia1.56e-078
cerebral subcortex1.56e-078
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:129458922..129458941,-&oldid=4325997"