FFCP PHASE1:Mm9::chr11:67400054..67400065,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=14457|HGNC=|UniProt=Q3U432,Q0VBR8,Q3U8N2|association_with_transcript=16bp_to_ENSMUST00000108682,NM_001109657,uc011xwo.1_5end|description=CAGE_peak_13_at_Gas7_5end|id=chr11:67400054..67400065,+|ontology_enrichment_celltype=CL:0000107!2.24e-08!9|ontology_enrichment_celltype_v019_2=CL:0000107,7.61e-28,9;CL:0000221,7.92e-10,44;CL:0000133,7.92e-10,44;CL:0002319,1.90e-08,43;CL:0002476,2.68e-08,2;CL:0000540,5.23e-08,33;CL:0000047,5.23e-08,33;CL:0000031,5.23e-08,33;CL:0000404,5.23e-08,33;CL:0000217,3.52e-07,2;CL:0000328,3.52e-07,2;CL:0002573,3.52e-07,2;CL:0002376,3.52e-07,2;CL:0000218,3.52e-07,2;CL:0000692,3.52e-07,2;CL:0002377,3.52e-07,2;CL:0002375,3.52e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!7.72e-10!11;UBERON:0000991!1.09e-08!18;UBERON:0005564!1.09e-08!18;UBERON:0002410!2.24e-08!9;UBERON:0004176!4.33e-08!17;UBERON:0009196!4.33e-08!17;UBERON:0009117!4.33e-08!17;UBERON:0000473!6.37e-08!14;UBERON:0003135!4.76e-07!15;UBERON:0003133!5.34e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.66e-33,11;UBERON:0002410,7.61e-28,9;UBERON:0000473,3.04e-26,14;UBERON:0003135,2.34e-24,15;UBERON:0003101,1.05e-22,16;UBERON:0000079,1.05e-22,16;UBERON:0004176,2.99e-21,17;UBERON:0009196,2.99e-21,17;UBERON:0009117,2.99e-21,17;UBERON:0000991,5.90e-20,18;UBERON:0005564,5.90e-20,18;UBERON:0003133,3.51e-17,24;UBERON:0005156,1.11e-15,26;UBERON:0000990,1.11e-15,26;UBERON:0000011,5.25e-11,3;UBERON:0000013,3.13e-10,3;UBERON:0010313,8.00e-10,3;UBERON:0002342,8.00e-10,3;UBERON:0002005,8.00e-10,3;UBERON:0005428,8.00e-10,3;UBERON:0005062,8.00e-10,3;UBERON:0002323,1.18e-08,37;UBERON:0004458,1.18e-08,37;UBERON:0003886,2.26e-08,38;UBERON:0002553,4.17e-08,39|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.202753862439029,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0.514518872071894,0.85960031981627,0,0.404632921719196,0,0,0,0.889294796111139,0,0,0.7104801149461,0.299600110518405,0,0,0,0,0,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,1.17851434189467,0.569486723196412,0,1.81742863999642,2.19157524309678,0,0,0,0,0,0,0,0,0,0,3.09855523508697,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0.346970653532272,0.304465478312141,0.230615497256059,0.301445281105245,0.470354828542819,0.251333182659351,0,1.15679485535929,0,0.485300549842228,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0,0.305518091550949,0,0,0.210441855886474,0,0,0,0.30140963567143,0.136072998302656,0.512454881139399,0.468508622798644,0,0,0,0.351902248327898,0,0.278047249225598,0.348252166522167,0.411564272815887,0.796137067273973,0,0,0,0.207125772535502,0,0.36012412292203,0.946978942340841,0.196764231747404,0.308534225774757,0.232533944750408,0,0.116765342367169,0.493679549740441,0.164167464079095,0.56748166682099,0.146199987425332,0.439100230582101,0.805238512562231,0.210289948564127,0,0.330418782983798,0,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0.379335801906163,0.228497025219458,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0.327726629431476,0.172684981865896,0,6.03165135757089,5.98296252200581,0,0.275936746304732,0,0,0.491804836130026,0,1.26203287766503,1.56175497718655,2.36965737506079,2.62865677747807,3.11918143715352,5.94460714656548,2.02405350837447,2.33804686329049,2.37172666767914,0.321321316421807,0.283880170416537,0.178065603667255,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0.712994756769443,0.316036757935816,0,0,0,0,0,0,0,0.356737635204141,0,0,0.469343416127421,0,0,0.32977250588296,0.484393280087717,0.542816324353403,0.119372344003136,0.164140899745061,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0,0.436725127492355,0.134864346384821,0.743881101528023,0.26175594198403,0.259229946583586,0.621339313086926,1.12738587736838,2.69129782879162,1.82004339502807,3.30567020184881,2.0665571756437,4.22390313726945,2.11243029562357,4.9477666240701,3.8797957437513,2.65742532908607,1.15212002503146,0,0,0,0,0.358053391334963,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,1.50145980360946,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0.222246727801615,0.412070114477788,0.320919209591815,0.252697211763798,0,0.377252682772152,0.280924522409647,0,0.287177344778066,0,0.231768651889711,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.177475806159338,0.476872379894642,0.290692833264657,0.0941093804153306,0.338458431566706,0.182927972872773,0.263069711437843,0.271608227691724,0,0,0.394017929502254,0.409231043169689,0.309873682371932,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0.57386499620653,0.220591419119515,0.231867835620421|short_description=p13@Gas7}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14457 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q3U432,Q0VBR8,Q3U8N2 | |||
|association_with_transcript=16bp_to_ENSMUST00000108682,NM_001109657,uc011xwo.1_5end | |||
|cluster_id=chr11:67400054..67400065,+ | |||
|description=CAGE_peak_13_at_Gas7_5end | |||
|id=chr11:67400054..67400065,+ | |||
|ontology_enrichment_celltype=CL:0000107!2.24e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,7.61e-28,9;CL:0000221,7.92e-10,44;CL:0000133,7.92e-10,44;CL:0002319,1.90e-08,43;CL:0002476,2.68e-08,2;CL:0000540,5.23e-08,33;CL:0000047,5.23e-08,33;CL:0000031,5.23e-08,33;CL:0000404,5.23e-08,33;CL:0000217,3.52e-07,2;CL:0000328,3.52e-07,2;CL:0002573,3.52e-07,2;CL:0002376,3.52e-07,2;CL:0000218,3.52e-07,2;CL:0000692,3.52e-07,2;CL:0002377,3.52e-07,2;CL:0002375,3.52e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!7.72e-10!11;UBERON:0000991!1.09e-08!18;UBERON:0005564!1.09e-08!18;UBERON:0002410!2.24e-08!9;UBERON:0004176!4.33e-08!17;UBERON:0009196!4.33e-08!17;UBERON:0009117!4.33e-08!17;UBERON:0000473!6.37e-08!14;UBERON:0003135!4.76e-07!15;UBERON:0003133!5.34e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.66e-33,11;UBERON:0002410,7.61e-28,9;UBERON:0000473,3.04e-26,14;UBERON:0003135,2.34e-24,15;UBERON:0003101,1.05e-22,16;UBERON:0000079,1.05e-22,16;UBERON:0004176,2.99e-21,17;UBERON:0009196,2.99e-21,17;UBERON:0009117,2.99e-21,17;UBERON:0000991,5.90e-20,18;UBERON:0005564,5.90e-20,18;UBERON:0003133,3.51e-17,24;UBERON:0005156,1.11e-15,26;UBERON:0000990,1.11e-15,26;UBERON:0000011,5.25e-11,3;UBERON:0000013,3.13e-10,3;UBERON:0010313,8.00e-10,3;UBERON:0002342,8.00e-10,3;UBERON:0002005,8.00e-10,3;UBERON:0005428,8.00e-10,3;UBERON:0005062,8.00e-10,3;UBERON:0002323,1.18e-08,37;UBERON:0004458,1.18e-08,37;UBERON:0003886,2.26e-08,38;UBERON:0002553,4.17e-08,39 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.202753862439029,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0.514518872071894,0.85960031981627,0,0.404632921719196,0,0,0,0.889294796111139,0,0,0.7104801149461,0.299600110518405,0,0,0,0,0,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,1.17851434189467,0.569486723196412,0,1.81742863999642,2.19157524309678,0,0,0,0,0,0,0,0,0,0,3.09855523508697,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0.346970653532272,0.304465478312141,0.230615497256059,0.301445281105245,0.470354828542819,0.251333182659351,0,1.15679485535929,0,0.485300549842228,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0,0.305518091550949,0,0,0.210441855886474,0,0,0,0.30140963567143,0.136072998302656,0.512454881139399,0.468508622798644,0,0,0,0.351902248327898,0,0.278047249225598,0.348252166522167,0.411564272815887,0.796137067273973,0,0,0,0.207125772535502,0,0.36012412292203,0.946978942340841,0.196764231747404,0.308534225774757,0.232533944750408,0,0.116765342367169,0.493679549740441,0.164167464079095,0.56748166682099,0.146199987425332,0.439100230582101,0.805238512562231,0.210289948564127,0,0.330418782983798,0,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0.379335801906163,0.228497025219458,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0.327726629431476,0.172684981865896,0,6.03165135757089,5.98296252200581,0,0.275936746304732,0,0,0.491804836130026,0,1.26203287766503,1.56175497718655,2.36965737506079,2.62865677747807,3.11918143715352,5.94460714656548,2.02405350837447,2.33804686329049,2.37172666767914,0.321321316421807,0.283880170416537,0.178065603667255,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0.712994756769443,0.316036757935816,0,0,0,0,0,0,0,0.356737635204141,0,0,0.469343416127421,0,0,0.32977250588296,0.484393280087717,0.542816324353403,0.119372344003136,0.164140899745061,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0,0.436725127492355,0.134864346384821,0.743881101528023,0.26175594198403,0.259229946583586,0.621339313086926,1.12738587736838,2.69129782879162,1.82004339502807,3.30567020184881,2.0665571756437,4.22390313726945,2.11243029562357,4.9477666240701,3.8797957437513,2.65742532908607,1.15212002503146,0,0,0,0,0.358053391334963,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,1.50145980360946,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0.222246727801615,0.412070114477788,0.320919209591815,0.252697211763798,0,0.377252682772152,0.280924522409647,0,0.287177344778066,0,0.231768651889711,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.177475806159338,0.476872379894642,0.290692833264657,0.0941093804153306,0.338458431566706,0.182927972872773,0.263069711437843,0.271608227691724,0,0,0.394017929502254,0.409231043169689,0.309873682371932,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0.57386499620653,0.220591419119515,0.231867835620421 | |||
|short_description=p13@Gas7 | |||
}} |
Latest revision as of 22:58, 1 October 2015
Short description: | p13@Gas7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Gas7_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_ENSMUST00000108682, NM_001109657, uc011xwo.1_5end |
EntrezGene: | Gas7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 7.61e-28 | 9 |
ectodermal cell | 7.92e-10 | 44 |
neurectodermal cell | 7.92e-10 | 44 |
neural cell | 1.90e-08 | 43 |
bone marrow macrophage | 2.68e-08 | 2 |
neuron | 5.23e-08 | 33 |
neuronal stem cell | 5.23e-08 | 33 |
neuroblast | 5.23e-08 | 33 |
electrically signaling cell | 5.23e-08 | 33 |
insulating cell | 3.52e-07 | 2 |
myelin accumulating cell | 3.52e-07 | 2 |
Schwann cell | 3.52e-07 | 2 |
non-myelinating Schwann cell | 3.52e-07 | 2 |
myelinating Schwann cell;;Schwann cell | 3.52e-07 | 2 |
terminal Schwann cell | 3.52e-07 | 2 |
immature Schwann cell | 3.52e-07 | 2 |
Schwann cell precursor | 3.52e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 1.66e-33 | 11 |
autonomic nervous system | 7.61e-28 | 9 |
testis | 3.04e-26 | 14 |
male reproductive organ | 2.34e-24 | 15 |
male organism | 1.05e-22 | 16 |
male reproductive system | 1.05e-22 | 16 |
external genitalia | 2.99e-21 | 17 |
indifferent external genitalia | 2.99e-21 | 17 |
indifferent gonad | 2.99e-21 | 17 |
gonad | 5.90e-20 | 18 |
gonad primordium | 5.90e-20 | 18 |
reproductive organ | 3.51e-17 | 24 |
reproductive structure | 1.11e-15 | 26 |
reproductive system | 1.11e-15 | 26 |
parasympathetic nervous system | 5.25e-11 | 3 |
sympathetic nervous system | 3.13e-10 | 3 |
neural crest-derived structure | 8.00e-10 | 3 |
neural crest | 8.00e-10 | 3 |
enteric nervous system | 8.00e-10 | 3 |
vagal neural crest | 8.00e-10 | 3 |
neural fold | 8.00e-10 | 3 |
body cavity | 1.18e-08 | 37 |
body cavity or lining | 1.18e-08 | 37 |
body cavity precursor | 2.26e-08 | 38 |
anatomical cavity | 4.17e-08 | 39 |