FFCP PHASE1:Mm9::chr5:130505215..130505248,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr5:130505215..130505248,+ to FFCP PHASE1:Mm9::chr5:130505215..130505248,+: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12909 | |EntrezGene=12909 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_ENSMUST00000156729_5end | |||
|cluster_id=chr5:130505215..130505248,+ | |||
|description=CAGE_peak_2_at_Crcp_5end | |||
|id=chr5:130505215..130505248,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!5.18e-12!86;UBERON:0001049!6.78e-12!52;UBERON:0005068!6.78e-12!52;UBERON:0006241!6.78e-12!52;UBERON:0007135!6.78e-12!52;UBERON:0002020!8.45e-12!34;UBERON:0000955!2.68e-11!50;UBERON:0006238!2.68e-11!50;UBERON:0000153!3.16e-11!94;UBERON:0002346!4.63e-11!71;UBERON:0003075!4.63e-11!71;UBERON:0007284!4.63e-11!71;UBERON:0002616!7.83e-11!49;UBERON:0002791!3.29e-10!29;UBERON:0003528!3.29e-10!29;UBERON:0001893!3.29e-10!29;UBERON:0000033!3.70e-10!63;UBERON:0003080!7.70e-10!40;UBERON:0003056!1.24e-09!49;UBERON:0002780!2.48e-09!39;UBERON:0001890!2.48e-09!39;UBERON:0006240!2.48e-09!39;UBERON:0001017!8.94e-09!73;UBERON:0005743!8.94e-09!73;UBERON:0000073!1.91e-08!75;UBERON:0001016!1.91e-08!75;UBERON:0004121!1.36e-07!102;UBERON:0000924!1.36e-07!102;UBERON:0006601!1.36e-07!102;UBERON:0002021!1.49e-07!10;UBERON:0000411!1.49e-07!10;UBERON:0001950!1.49e-07!10;UBERON:0000475!2.83e-07!200;UBERON:0000956!5.21e-07!21;UBERON:0001869!5.21e-07!21;UBERON:0000203!5.21e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.91e-12,54;UBERON:0001049,6.93e-12,52;UBERON:0005068,6.93e-12,52;UBERON:0006241,6.93e-12,52;UBERON:0007135,6.93e-12,52;UBERON:0002020,8.44e-12,34;UBERON:0002346,3.48e-11,64;UBERON:0003075,3.48e-11,64;UBERON:0007284,3.48e-11,64;UBERON:0000955,2.90e-10,47;UBERON:0006238,2.90e-10,47;UBERON:0003528,3.29e-10,29;UBERON:0002791,3.29e-10,29;UBERON:0001893,3.29e-10,29;UBERON:0003080,7.69e-10,40;UBERON:0002616,8.27e-10,46;UBERON:0003056,1.24e-09,49;UBERON:0002780,2.48e-09,39;UBERON:0001890,2.48e-09,39;UBERON:0006240,2.48e-09,39;UBERON:0010371,2.99e-09,73;UBERON:0001017,9.12e-09,73;UBERON:0001016,1.94e-08,75;UBERON:0002021,1.49e-07,10;UBERON:0000411,1.49e-07,10;UBERON:0001950,1.49e-07,10;UBERON:0004121,2.03e-07,95;UBERON:0000924,2.03e-07,95;UBERON:0006601,2.03e-07,95;UBERON:0000956,5.21e-07,21;UBERON:0001869,5.21e-07,21;UBERON:0000203,5.21e-07,21 | |||
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| ||
|short_description=p2@Crcp | |||
}} | }} |
Latest revision as of 22:59, 1 October 2015
Short description: | p2@Crcp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Crcp_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_ENSMUST00000156729_5end |
EntrezGene: | Crcp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.91e-12 | 54 |
neural tube | 6.93e-12 | 52 |
neural rod | 6.93e-12 | 52 |
future spinal cord | 6.93e-12 | 52 |
neural keel | 6.93e-12 | 52 |
gray matter | 8.44e-12 | 34 |
neurectoderm | 3.48e-11 | 64 |
neural plate | 3.48e-11 | 64 |
presumptive neural plate | 3.48e-11 | 64 |
brain | 2.90e-10 | 47 |
future brain | 2.90e-10 | 47 |
brain grey matter | 3.29e-10 | 29 |
regional part of telencephalon | 3.29e-10 | 29 |
telencephalon | 3.29e-10 | 29 |
anterior neural tube | 7.69e-10 | 40 |
regional part of brain | 8.27e-10 | 46 |
pre-chordal neural plate | 1.24e-09 | 49 |
regional part of forebrain | 2.48e-09 | 39 |
forebrain | 2.48e-09 | 39 |
future forebrain | 2.48e-09 | 39 |
ecto-epithelium | 2.99e-09 | 73 |
central nervous system | 9.12e-09 | 73 |
nervous system | 1.94e-08 | 75 |
occipital lobe | 1.49e-07 | 10 |
visual cortex | 1.49e-07 | 10 |
neocortex | 1.49e-07 | 10 |
ectoderm-derived structure | 2.03e-07 | 95 |
ectoderm | 2.03e-07 | 95 |
presumptive ectoderm | 2.03e-07 | 95 |
cerebral cortex | 5.21e-07 | 21 |
cerebral hemisphere | 5.21e-07 | 21 |
pallium | 5.21e-07 | 21 |