FFCP PHASE1:Mm9::chr6:96063140..96063164,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=320265 | |EntrezGene=320265 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q7TPG8 | |UniProt=Q7TPG8 | ||
|association_with_transcript=0bp_to_ENSMUST00000122120,NM_182808,uc009dae.1_5end | |association_with_transcript=0bp_to_ENSMUST00000122120,NM_182808,uc009dae.1_5end | ||
|cluster_id=chr6:96063140..96063164,+ | |||
|description=CAGE_peak_1_at_Fam19a1_5end | |description=CAGE_peak_1_at_Fam19a1_5end | ||
|id=chr6:96063140..96063164,+ | |id=chr6:96063140..96063164,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.15e-11!23;CL:0000337!1.15e-11!23;CL:0000540!2.18e-10!33;CL:0000047!2.18e-10!33;CL:0000031!2.18e-10!33;CL:0000404!2.18e-10!33;CL:0000393!2.34e-09!39;CL:0000211!2.34e-09!39 | |ontology_enrichment_celltype=CL:0000117!1.15e-11!23;CL:0000337!1.15e-11!23;CL:0000540!2.18e-10!33;CL:0000047!2.18e-10!33;CL:0000031!2.18e-10!33;CL:0000404!2.18e-10!33;CL:0000393!2.34e-09!39;CL:0000211!2.34e-09!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.08e-13,23;CL:0000337,1.08e-13,23;CL:0000540,7.21e-10,33;CL:0000047,7.21e-10,33;CL:0000031,7.21e-10,33;CL:0000404,7.21e-10,33;CL:0000393,1.06e-09,39;CL:0000211,1.06e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.12e-17!71;UBERON:0003075!1.12e-17!71;UBERON:0007284!1.12e-17!71;UBERON:0001017!6.92e-17!73;UBERON:0005743!6.92e-17!73;UBERON:0000073!1.63e-16!75;UBERON:0001016!1.63e-16!75;UBERON:0004121!3.88e-16!102;UBERON:0000924!3.88e-16!102;UBERON:0006601!3.88e-16!102;UBERON:0000033!4.36e-16!63;UBERON:0002020!2.41e-15!34;UBERON:0001049!4.66e-15!52;UBERON:0005068!4.66e-15!52;UBERON:0006241!4.66e-15!52;UBERON:0007135!4.66e-15!52;UBERON:0003056!8.32e-15!49;UBERON:0000955!5.27e-14!50;UBERON:0006238!5.27e-14!50;UBERON:0002616!1.78e-13!49;UBERON:0002791!2.58e-12!29;UBERON:0003528!2.58e-12!29;UBERON:0001893!2.58e-12!29;UBERON:0003080!3.25e-12!40;UBERON:0002780!1.13e-11!39;UBERON:0001890!1.13e-11!39;UBERON:0006240!1.13e-11!39;UBERON:0002021!8.81e-09!10;UBERON:0000411!8.81e-09!10;UBERON:0001950!8.81e-09!10;UBERON:0000956!1.34e-08!21;UBERON:0001869!1.34e-08!21;UBERON:0000203!1.34e-08!21;UBERON:0002619!1.53e-08!17;UBERON:0000153!5.27e-08!94;UBERON:0007811!7.58e-08!86 | |ontology_enrichment_uberon=UBERON:0002346!1.12e-17!71;UBERON:0003075!1.12e-17!71;UBERON:0007284!1.12e-17!71;UBERON:0001017!6.92e-17!73;UBERON:0005743!6.92e-17!73;UBERON:0000073!1.63e-16!75;UBERON:0001016!1.63e-16!75;UBERON:0004121!3.88e-16!102;UBERON:0000924!3.88e-16!102;UBERON:0006601!3.88e-16!102;UBERON:0000033!4.36e-16!63;UBERON:0002020!2.41e-15!34;UBERON:0001049!4.66e-15!52;UBERON:0005068!4.66e-15!52;UBERON:0006241!4.66e-15!52;UBERON:0007135!4.66e-15!52;UBERON:0003056!8.32e-15!49;UBERON:0000955!5.27e-14!50;UBERON:0006238!5.27e-14!50;UBERON:0002616!1.78e-13!49;UBERON:0002791!2.58e-12!29;UBERON:0003528!2.58e-12!29;UBERON:0001893!2.58e-12!29;UBERON:0003080!3.25e-12!40;UBERON:0002780!1.13e-11!39;UBERON:0001890!1.13e-11!39;UBERON:0006240!1.13e-11!39;UBERON:0002021!8.81e-09!10;UBERON:0000411!8.81e-09!10;UBERON:0001950!8.81e-09!10;UBERON:0000956!1.34e-08!21;UBERON:0001869!1.34e-08!21;UBERON:0000203!1.34e-08!21;UBERON:0002619!1.53e-08!17;UBERON:0000153!5.27e-08!94;UBERON:0007811!7.58e-08!86 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.06e-19,34;UBERON:0002346,1.83e-18,64;UBERON:0003075,1.83e-18,64;UBERON:0007284,1.83e-18,64;UBERON:0000073,2.11e-18,54;UBERON:0001017,2.72e-17,73;UBERON:0001049,1.20e-16,52;UBERON:0005068,1.20e-16,52;UBERON:0006241,1.20e-16,52;UBERON:0007135,1.20e-16,52;UBERON:0001016,2.19e-16,75;UBERON:0003056,1.48e-15,49;UBERON:0003528,1.64e-15,29;UBERON:0002791,1.64e-15,29;UBERON:0001893,1.64e-15,29;UBERON:0010371,3.36e-15,73;UBERON:0004121,8.60e-15,95;UBERON:0000924,8.60e-15,95;UBERON:0006601,8.60e-15,95;UBERON:0003080,3.89e-13,40;UBERON:0000955,5.55e-13,47;UBERON:0006238,5.55e-13,47;UBERON:0002780,1.95e-12,39;UBERON:0001890,1.95e-12,39;UBERON:0006240,1.95e-12,39;UBERON:0002616,2.50e-12,46;UBERON:0002619,3.31e-12,17;UBERON:0002021,1.10e-11,10;UBERON:0000411,1.10e-11,10;UBERON:0001950,1.10e-11,10;UBERON:0010314,9.83e-11,92;UBERON:0000956,2.23e-10,21;UBERON:0001869,2.23e-10,21;UBERON:0000203,2.23e-10,21 | |||
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74190476664707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51793635951155,1.11514624341466,2.75320128242522,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,7.40587370980846,7.60597684207415,0,0,0,0,0,0.898800331555214,0,0.518448061542388,0.270011876663381,0.420649922702764,4.28476476605705,6.40518768759679,1.95985278743926,2.39613677545591,6.43453150627015,17.6185409599022,7.15049093277051,11.0596703944495,3.69281605644543,3.38504281328916,5.2091337055676,6.42120897703176,8.4414391504752,8.40390362772456,20.6240009831567,13.9524247183121,5.59198337475902,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0.511290967734173,0.519572009205738,0.35333957451034,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0,0.742210695324124,0.520455980298408,1.52232739156071,1.15307748628029,0.452167921657868,1.88141931417128,0,0,2.02439099687876,0,0.323533699894818,0.220841518460394,0,0,0.878342391034642,0.209446706813455,0.255457055208591,0,0,0,6.29120685500255,1.83000241127451,1.00523481690292,28.3333641913411,27.3615539343454,4.1557608911912,9.08551073179443,0.407357455401265,0.124406970610093,0,0.631325567659422,0,0.919608417733892,2.34080768746954,4.21973489940002,9.32100038373192,10.6334387836425,7.30873451565885,2.84573707812917,0.215567992932842,2.45837904218165,1.75951124163949,0.657587197282725,0.834141747676794,0.696504333044333,0,0.398068533636986,0,0,0,0.414251545071004,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,29.8611726961061,1.74937841044784,0,0,0.426576501070468,0.232236671860439,2.31961430379768,2.21851877085677,1.77902435075896,1.33157938278791,0,0.988193728344065,0.251335208800269,0.596869416123452,0.974820435595601,0,0,0.199141273254367,1.32767530667157,1.25673363870702,1.1270773567308,0.814605311381257,0.969762435838129,0.701358198903186,1.13825766823663,0.147610147979602,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0.358794827043824,0.482443521363367,1.66277871149944,0.189491411770485,0.325929952884052,0.339490171550376,0.234690248288502,0.837531287209079,0.238043640886014,0.195133647857799,1.89162172927429,2.6575762757853,3.18909537314974,2.13022309130459,1.72684981865896,1.73578870297814,0,0,0,0,5.13761887960934,6.32943107597897,0.163934945376675,0,0.631016438832513,0,1.29254038639679,0,0.668396022247182,0.566153061577665,0.404810701674894,1.16902343164525,0.790575555893047,4.4984984299053,0,0.712262414669021,0.162886959353576,0,0,0,0.302323556964751,0,0,0.307435147943927,0.775284879504663,0.363533729477506,0,0,0,0,1.36175842301515,0,0,0.643011105094777,0.532020700926821,0.713475270408282,0.493647061806363,0.304464949114599,0.23467170806371,0,0.220528398054962,0,0.807322133479528,0.120625849856312,0.119372344003136,0,0,3.70850604021019,0,3.50857675537478,3.1483069652851,0,0,0,0,0,0,0,0.632671987162271,3.04979200690273,2.16010681643603,2.50905955217362,0.436725127492355,0.404593039154462,0.826534557253359,0.523511883968059,0.388844919875379,0,0,0,0.165458490457098,0.388902376688095,0.516639293910924,0.844780627453891,1.5256441023948,0.39061315453185,0.209718688851422,0,0,0,1.01362607645082,1.43795340030758,0.77952493786677,0,0,0.240390899039938,0.147689527174577,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,66.0759655861968,82.3982173347847,87.0801180427883,73.0376024960672,60.9723442595872,64.2084812781245,62.1020700213261,51.3366171675611,61.6273676218518,51.2582708634302,0,0,2.04880326904961,0.972426868273176,0.419226325255965,0.919217542250071,2.44471400581777,0.206035057238894,0.320919209591815,1.51618327058278,1.52087579934144,1.50901073108861,1.87283014939765,1.60062881012173,1.26358031702349,1.42888107384922,1.0429589335037,1.54327376370964,0.824171801606613,1.91358596174717,0.685738504770831,2.12970967391205,1.66905332963125,1.45346416632329,1.41164070622996,1.18460451048347,1.82927972872773,2.63069711437843,2.03706170768793,1.68342681497322,1.89816028998679,1.37906275325789,3.6830793885272,2.01417893541756,1.54325288784913,0.999242311751784,0.467863216890817,1.07435527024149,1.14772999241306,1.10295709559758,0.231867835620421 | |phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74190476664707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51793635951155,1.11514624341466,2.75320128242522,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,7.40587370980846,7.60597684207415,0,0,0,0,0,0.898800331555214,0,0.518448061542388,0.270011876663381,0.420649922702764,4.28476476605705,6.40518768759679,1.95985278743926,2.39613677545591,6.43453150627015,17.6185409599022,7.15049093277051,11.0596703944495,3.69281605644543,3.38504281328916,5.2091337055676,6.42120897703176,8.4414391504752,8.40390362772456,20.6240009831567,13.9524247183121,5.59198337475902,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0.511290967734173,0.519572009205738,0.35333957451034,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0,0.742210695324124,0.520455980298408,1.52232739156071,1.15307748628029,0.452167921657868,1.88141931417128,0,0,2.02439099687876,0,0.323533699894818,0.220841518460394,0,0,0.878342391034642,0.209446706813455,0.255457055208591,0,0,0,6.29120685500255,1.83000241127451,1.00523481690292,28.3333641913411,27.3615539343454,4.1557608911912,9.08551073179443,0.407357455401265,0.124406970610093,0,0.631325567659422,0,0.919608417733892,2.34080768746954,4.21973489940002,9.32100038373192,10.6334387836425,7.30873451565885,2.84573707812917,0.215567992932842,2.45837904218165,1.75951124163949,0.657587197282725,0.834141747676794,0.696504333044333,0,0.398068533636986,0,0,0,0.414251545071004,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,29.8611726961061,1.74937841044784,0,0,0.426576501070468,0.232236671860439,2.31961430379768,2.21851877085677,1.77902435075896,1.33157938278791,0,0.988193728344065,0.251335208800269,0.596869416123452,0.974820435595601,0,0,0.199141273254367,1.32767530667157,1.25673363870702,1.1270773567308,0.814605311381257,0.969762435838129,0.701358198903186,1.13825766823663,0.147610147979602,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0.358794827043824,0.482443521363367,1.66277871149944,0.189491411770485,0.325929952884052,0.339490171550376,0.234690248288502,0.837531287209079,0.238043640886014,0.195133647857799,1.89162172927429,2.6575762757853,3.18909537314974,2.13022309130459,1.72684981865896,1.73578870297814,0,0,0,0,5.13761887960934,6.32943107597897,0.163934945376675,0,0.631016438832513,0,1.29254038639679,0,0.668396022247182,0.566153061577665,0.404810701674894,1.16902343164525,0.790575555893047,4.4984984299053,0,0.712262414669021,0.162886959353576,0,0,0,0.302323556964751,0,0,0.307435147943927,0.775284879504663,0.363533729477506,0,0,0,0,1.36175842301515,0,0,0.643011105094777,0.532020700926821,0.713475270408282,0.493647061806363,0.304464949114599,0.23467170806371,0,0.220528398054962,0,0.807322133479528,0.120625849856312,0.119372344003136,0,0,3.70850604021019,0,3.50857675537478,3.1483069652851,0,0,0,0,0,0,0,0.632671987162271,3.04979200690273,2.16010681643603,2.50905955217362,0.436725127492355,0.404593039154462,0.826534557253359,0.523511883968059,0.388844919875379,0,0,0,0.165458490457098,0.388902376688095,0.516639293910924,0.844780627453891,1.5256441023948,0.39061315453185,0.209718688851422,0,0,0,1.01362607645082,1.43795340030758,0.77952493786677,0,0,0.240390899039938,0.147689527174577,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,66.0759655861968,82.3982173347847,87.0801180427883,73.0376024960672,60.9723442595872,64.2084812781245,62.1020700213261,51.3366171675611,61.6273676218518,51.2582708634302,0,0,2.04880326904961,0.972426868273176,0.419226325255965,0.919217542250071,2.44471400581777,0.206035057238894,0.320919209591815,1.51618327058278,1.52087579934144,1.50901073108861,1.87283014939765,1.60062881012173,1.26358031702349,1.42888107384922,1.0429589335037,1.54327376370964,0.824171801606613,1.91358596174717,0.685738504770831,2.12970967391205,1.66905332963125,1.45346416632329,1.41164070622996,1.18460451048347,1.82927972872773,2.63069711437843,2.03706170768793,1.68342681497322,1.89816028998679,1.37906275325789,3.6830793885272,2.01417893541756,1.54325288784913,0.999242311751784,0.467863216890817,1.07435527024149,1.14772999241306,1.10295709559758,0.231867835620421 | ||
|short_description=p1@Fam19a1 | |short_description=p1@Fam19a1 | ||
}} | }} |
Latest revision as of 23:06, 1 October 2015
Short description: | p1@Fam19a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam19a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000122120, NM_182808, uc009dae.1_5end |
EntrezGene: | Fam19a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.08e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.08e-13 | 23 |
neuron | 7.21e-10 | 33 |
neuronal stem cell | 7.21e-10 | 33 |
neuroblast | 7.21e-10 | 33 |
electrically signaling cell | 7.21e-10 | 33 |
electrically responsive cell | 1.06e-09 | 39 |
electrically active cell | 1.06e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
gray matter | 1.06e-19 | 34 |
neurectoderm | 1.83e-18 | 64 |
neural plate | 1.83e-18 | 64 |
presumptive neural plate | 1.83e-18 | 64 |
regional part of nervous system | 2.11e-18 | 54 |
central nervous system | 2.72e-17 | 73 |
neural tube | 1.20e-16 | 52 |
neural rod | 1.20e-16 | 52 |
future spinal cord | 1.20e-16 | 52 |
neural keel | 1.20e-16 | 52 |
nervous system | 2.19e-16 | 75 |
pre-chordal neural plate | 1.48e-15 | 49 |
brain grey matter | 1.64e-15 | 29 |
regional part of telencephalon | 1.64e-15 | 29 |
telencephalon | 1.64e-15 | 29 |
ecto-epithelium | 3.36e-15 | 73 |
ectoderm-derived structure | 8.60e-15 | 95 |
ectoderm | 8.60e-15 | 95 |
presumptive ectoderm | 8.60e-15 | 95 |
anterior neural tube | 3.89e-13 | 40 |
brain | 5.55e-13 | 47 |
future brain | 5.55e-13 | 47 |
regional part of forebrain | 1.95e-12 | 39 |
forebrain | 1.95e-12 | 39 |
future forebrain | 1.95e-12 | 39 |
regional part of brain | 2.50e-12 | 46 |
regional part of cerebral cortex | 3.31e-12 | 17 |
occipital lobe | 1.10e-11 | 10 |
visual cortex | 1.10e-11 | 10 |
neocortex | 1.10e-11 | 10 |
structure with developmental contribution from neural crest | 9.83e-11 | 92 |
cerebral cortex | 2.23e-10 | 21 |
cerebral hemisphere | 2.23e-10 | 21 |
pallium | 2.23e-10 | 21 |