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FFCP PHASE1:Mm9::chr5:135028284..135028314,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=269713
|EntrezGene=269713
|HGNC=
|HGNC=
|MCL_coexpression_id=3505
|TSSclassifier=NA
|UniProt=Q9Z0H8
|UniProt=Q9Z0H8
|association_with_transcript=0bp_to_ENSMUST00000036999,ENSMUST00000100647,NM_001039162,NM_009990,uc008zwi.1,uc008zwj.1_5end
|association_with_transcript=0bp_to_ENSMUST00000036999,ENSMUST00000100647,NM_001039162,NM_009990,uc008zwi.1,uc008zwj.1_5end
|cluster_id=chr5:135028284..135028314,-
|description=CAGE_peak_2_at_Clip2_5end
|description=CAGE_peak_2_at_Clip2_5end
|id=chr5:135028284..135028314,-
|id=chr5:135028284..135028314,-
|ontology_enrichment_celltype=CL:0000540!2.12e-16!33;CL:0000047!2.12e-16!33;CL:0000031!2.12e-16!33;CL:0000404!2.12e-16!33;CL:0000117!2.85e-14!23;CL:0000337!2.85e-14!23;CL:0000393!1.38e-12!39;CL:0000211!1.38e-12!39;CL:0002319!3.95e-12!43;CL:0000221!7.43e-12!44;CL:0000133!7.43e-12!44;CL:0000055!5.23e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000540,1.81e-16,33;CL:0000047,1.81e-16,33;CL:0000031,1.81e-16,33;CL:0000404,1.81e-16,33;CL:0000117,2.50e-14,23;CL:0000337,2.50e-14,23;CL:0000393,1.27e-12,39;CL:0000211,1.27e-12,39;CL:0002319,4.87e-12,43;CL:0000221,9.13e-12,44;CL:0000133,9.13e-12,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.27e-20!75;UBERON:0001016!1.27e-20!75;UBERON:0001017!5.11e-20!73;UBERON:0005743!5.11e-20!73;UBERON:0002346!1.32e-14!71;UBERON:0003075!1.32e-14!71;UBERON:0007284!1.32e-14!71;UBERON:0004121!2.17e-14!102;UBERON:0000924!2.17e-14!102;UBERON:0006601!2.17e-14!102;UBERON:0001049!7.74e-14!52;UBERON:0005068!7.74e-14!52;UBERON:0006241!7.74e-14!52;UBERON:0007135!7.74e-14!52;UBERON:0000955!4.43e-13!50;UBERON:0006238!4.43e-13!50;UBERON:0002020!5.38e-13!34;UBERON:0003056!5.48e-13!49;UBERON:0002616!1.70e-12!49;UBERON:0000033!2.57e-12!63;UBERON:0003080!6.81e-12!40;UBERON:0002780!2.38e-11!39;UBERON:0001890!2.38e-11!39;UBERON:0006240!2.38e-11!39;UBERON:0002791!1.12e-10!29;UBERON:0003528!1.12e-10!29;UBERON:0001893!1.12e-10!29;UBERON:0007811!3.48e-07!86;UBERON:0000153!4.33e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.47e-20,75;UBERON:0001017,5.92e-20,73;UBERON:0002346,3.55e-16,64;UBERON:0003075,3.55e-16,64;UBERON:0007284,3.55e-16,64;UBERON:0004121,3.64e-15,95;UBERON:0000924,3.64e-15,95;UBERON:0006601,3.64e-15,95;UBERON:0000073,8.08e-15,54;UBERON:0001049,7.68e-14,52;UBERON:0005068,7.68e-14,52;UBERON:0006241,7.68e-14,52;UBERON:0007135,7.68e-14,52;UBERON:0002020,5.49e-13,34;UBERON:0003056,6.16e-13,49;UBERON:0003080,6.92e-12,40;UBERON:0000955,9.02e-12,47;UBERON:0006238,9.02e-12,47;UBERON:0002780,2.42e-11,39;UBERON:0001890,2.42e-11,39;UBERON:0006240,2.42e-11,39;UBERON:0002616,3.34e-11,46;UBERON:0003528,1.16e-10,29;UBERON:0002791,1.16e-10,29;UBERON:0001893,1.16e-10,29;UBERON:0010371,1.59e-10,73;UBERON:0010314,1.20e-07,92
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862617385,0,5.38259565758324,3.97100377097034,4.4723773319131,4.26227417476513,2.36538575687089,1.17357238645754,1.8228613878153,2.30690557736564,0.724752362478018,1.72818003754719,2.21207784439725,4.66267995167378,3.08132871494482,1.55904987573354,2.8644271306797,2.18549490259391,1.56254084375959,2.51072196196781,2.92802704849628,3.04827226619999,3.12561173924206,3.70339946811059,4.2333210321745,2.92192255453922,0,6.21560669447381,5.56225910978749,10.2409615982088,1.35232715822533,1.12609485270709,2.38097111547445,1.07184189539533,2.00628841614145,10.1655331671072,5.9842280745933,6.87474616127276,10.4830441229649,10.9613203163303,8.3093328712867,4.05013500139084,11.7083512838297,5.89085131679466,10.8729665467882,13.0772057956063,11.1726964552289,9.90254913373978,6.56388136084394,6.28839487883947,8.45680138870065,7.55638874525492,5.76898160268904,7.70206103020357,4.54854981174835,4.30914809813408,5.84741658296836,4.30750934361459,5.8262888688431,5.74354689556133,5.71552429539688,6.48952225291191,5.01563973205633,6.59337441285291,6.03515572551029,4.4573002810104,3.90446773550542,6.43777712857767,7.84870649814574,6.39943786824248,6.00763716030903,7.13419094203813,4.20911538300549,5.70377278152619,5.61142271657738,8.77899134118889,5.31924204828043,4.09231043169689,5.88759996506671,4.43685205256625,19.7350356570977,5.14649538579898,3.00819475667618,1.14772999241306,1.76473135295612,0.463735671240843
|phase1_expression=2.40223270657191,5.93258192986914,4.54999239389536,5.14189159221611,5.50985302940982,5.70789524500425,3.73780224952841,3.35720640948098,2.956563165185,3.97909694747389,0.513653904676515,0.638177271962691,1.54080656938085,1.39872643870396,1.33243904726265,0.809901069559304,0,1.57731082679119,1.7824876368746,2.97072756258621,2.72138528483423,2.48227378002213,1.04479915655574,2.23989391910769,3.21172993494038,5.16808767703518,2.58457197695445,3.23206849028834,2.66032787238923,2.77233142735924,3.76941868114018,0,0.61506478758457,0,1.44425809875637,2.1610503896604,1.42918549383658,1.67412652294763,2.3440060335714,1.0470474879476,7.64700934440319,5.46436387966757,3.39857247121808,0.629484089877886,1.21652317463417,1.65192076945513,1.56478268869608,1.52617609466313,0.878744730937887,0.388859798148567,0.839918529752175,1.43752564364972,2.34895648480831,0.725362142011344,0.672187598284928,3.08711323243136,2.57880095944881,3.6097046459421,39.4517098676216,52.3701069479313,57.0448263155561,5.42151251310611,7.11435836888911,13.498495759221,22.7439263390404,19.1829631035447,11.3848041996994,5.76327457982332,13.6870288247191,15.3906769698127,15.1433972172995,9.42648248532552,6.40518768759679,31.2351537998133,26.2616590589968,46.8801581171111,27.5289702498472,7.53355294702608,9.98442466165583,49.9849030497435,37.967372095,43.2358097562111,11.1673199600552,12.380777420697,15.1270265299042,17.9723437138937,12.8134512719193,35.0430958151565,6.96680978665293,7.02815508993105,0.579728977403356,0.860423876981386,0,0,1.29955283489534,0,1.68533304158102,0.852151612890289,0,0.35333957451034,2.81686839553361,1.28326477414318,2.54805239706646,0,0.432982082022428,0.760079596425296,1.01104889002957,1.82694207550496,1.03575153458869,1.92974780784272,6.24547176358089,4.26251669636998,4.15107895060905,3.76806601381556,0.823120949949934,1.50799909595611,6.42706916109372,1.15679485535929,3.5384422077995,1.29413479957927,2.42925670306433,2.42437626567611,0,2.04946557908083,5.44561437714983,3.32094171771169,0.958520996047362,1.79970819298022,1.77898317902291,15.1288545798871,8.6925114535539,17.3403005915753,9.90798625095976,9.46147192122223,11.4283424507758,11.1946471516753,1.12023300235348,2.11491850037158,0.252722758433675,1.05220927943237,9.49879233627737,10.5754968039398,9.36323074987816,8.74087943447147,9.72921937863988,8.19927809823039,9.83868107877153,0.776110112217047,18.7544153851573,13.0483195315795,7.38994721488585,3.5071317188412,2.50242524303038,1.0447564995665,1.64625709126355,5.9710280045548,1.40442637462647,0.257347907114715,1.42081749697796,3.72826390563903,3.28336483973535,1.80062061461015,4.02466050494857,1.77087808572663,1.54267112887378,2.09280550275367,0.268273401399619,0.583826711835847,0.493679549740441,0.820837320395476,0.486412857275134,1.46199987425332,1.3173006917463,0.402619256281115,6.72927835405207,8.84979666461846,5.28670052774077,4.23120906661671,10.2378360256912,12.0763069367428,7.47431275668141,4.03367049246685,5.78182913996663,6.08722003560189,4.74529061544512,4.11747386810027,4.77536896720512,2.78539060857611,4.09424582950152,5.39291645192533,3.24207074812041,2.19055400579804,5.50036912763937,6.28366819353509,11.270773567308,5.90588850751411,4.65485969202302,2.59502533594179,3.09859031908861,1.77132177575523,1.255989822731,1.48076596706161,0,1.66845105716094,2.55526693647164,0.674586337154561,1.21716072833102,0.72353147925725,1.01850340712568,1.43848068725405,0.648540907100142,1.64736847912849,5.75072826109418,1.48856379067401,0.936113019343682,0.252578877947112,0.538192240565737,0.964887042726734,0.923765950833023,10.9905018826881,4.4000543639347,8.14776411720903,3.75504397261603,4.69017520837084,6.18913466303636,5.46374214001837,5.99013547603526,3.5434350343804,5.10255259703959,2.45794972073607,2.07221978239075,1.73578870297814,6.03165135757089,3.26343410291226,0.983528546038072,0.827810238914197,8.99083303931635,9.96299336033727,0.983609672260053,1.51482556322624,8.51872192423893,7.41833614163613,10.3403230911743,6.93009514062401,8.91194696329577,10.4738316391868,5.66734982344852,8.76767573733936,11.0680577825027,23.4564560987919,1.41940085208269,2.84904965867608,1.14020871547503,1.31976098378028,2.65490276679926,4.37005145078967,3.93020624054176,1.69744571780308,2.65771703592696,1.53717573971964,1.80899805217755,1.45413491791002,1.42598951353889,0.948110273807448,0,0,2.38307724027652,7.20244376125241,7.50280365939976,7.07312215604255,3.54680467284547,5.88617098086833,4.27827453565514,1.8267896946876,12.6722722354404,22.0305353698373,0.220528398054962,0.8244312647074,0.484393280087717,0.542816324353403,0.835606408021955,0.492422699235184,2.04036585640896,8.90041449650446,2.22132145037209,7.22354037871279,3.51869602002452,0.941842285023455,0.820165366326151,2.74533807847827,1.69978429993855,1.53946597556024,1.10559979043539,0,10.4390877881775,4.67634774391752,3.88819226958485,1.88179466413022,1.52853794622324,1.75323650300267,0.991841468704031,1.04702376793612,4.27729411862916,1.24267862617385,0,5.38259565758324,3.97100377097034,4.4723773319131,4.26227417476513,2.36538575687089,1.17357238645754,1.8228613878153,2.30690557736564,0.724752362478018,1.72818003754719,2.21207784439725,4.66267995167378,3.08132871494482,1.55904987573354,2.8644271306797,2.18549490259391,1.56254084375959,2.51072196196781,2.92802704849628,3.04827226619999,3.12561173924206,3.70339946811059,4.2333210321745,2.92192255453922,0,6.21560669447381,5.56225910978749,10.2409615982088,1.35232715822533,1.12609485270709,2.38097111547445,1.07184189539533,2.00628841614145,10.1655331671072,5.9842280745933,6.87474616127276,10.4830441229649,10.9613203163303,8.3093328712867,4.05013500139084,11.7083512838297,5.89085131679466,10.8729665467882,13.0772057956063,11.1726964552289,9.90254913373978,6.56388136084394,6.28839487883947,8.45680138870065,7.55638874525492,5.76898160268904,7.70206103020357,4.54854981174835,4.30914809813408,5.84741658296836,4.30750934361459,5.8262888688431,5.74354689556133,5.71552429539688,6.48952225291191,5.01563973205633,6.59337441285291,6.03515572551029,4.4573002810104,3.90446773550542,6.43777712857767,7.84870649814574,6.39943786824248,6.00763716030903,7.13419094203813,4.20911538300549,5.70377278152619,5.61142271657738,8.77899134118889,5.31924204828043,4.09231043169689,5.88759996506671,4.43685205256625,19.7350356570977,5.14649538579898,3.00819475667618,1.14772999241306,1.76473135295612,0.463735671240843
|short_description=p2@Clip2
|short_description=p2@Clip2
}}
}}

Latest revision as of 23:41, 1 October 2015

Short description:p2@Clip2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Clip2_5end
Coexpression cluster:MCL_coexpression_mm9:3505
Association with transcript: 0bp_to_ENSMUST00000036999, ENSMUST00000100647, NM_001039162, NM_009990, uc008zwi.1, uc008zwj.1_5end
EntrezGene:Clip2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Clip2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.14
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.71
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.74
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.96
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.98
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.64
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.54
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.40
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.58
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.78
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.21
GP2+ M cell, pool1.CNhs13228.11845-124H95.17
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I23.23
Ileum epithelium, pool1.CNhs13199.10252-104B92.66
Ileum epithelium, pool2.CNhs13232.10253-104C12.77
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G97.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H25.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.35
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C339.45
Mouse Granule cells, donor2.CNhs12357.11731-123E352.37
Mouse Granule cells, donor3.CNhs12108.11636-122C757.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.42
Mouse Meningeal cells, donor3.CNhs12109.11639-122D17.11
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C713.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E722.74
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D219.18
Mouse Microglia, donor1.CNhs12629.11718-123C811.38
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D513.69
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F515.39
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D915.14
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.41
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D231.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F226.26
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D646.88
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D327.53
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D449.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F437.97
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D843.24
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.17
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I615.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.97
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.81
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E135.04
Mouse Schwann, donor1.CNhs12507.11728-123D96.97
Mouse Schwann, donor2.CNhs12573.11746-123F97.03
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.83
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C56.25
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I14.15
adrenal gland, embryo E18.CNhs11026.1262-18F53.77
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A86.43
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I25.45
colon, adult.CNhs10468.36-18H73.32
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.96
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.78
corpora quadrigemina, adult.CNhs10501.16-22A415.13
corpus striatum, adult.CNhs10487.19-21D88.69
corpus striatum, neonate N00.CNhs11226.630-43F117.34
cortex, adult.CNhs10473.12-14D59.91
cortex, neonate N30.CNhs11107.1392-42F29.46
diencephalon, adult.CNhs10482.20-12F211.43
diencephalon, neonate N30.CNhs11201.1388-42B211.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.11
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C69.50
eyeball, embryo E14.CNhs10521.399-16E210.58
eyeball, embryo E15.CNhs10593.426-16C99.36
eyeball, embryo E17.CNhs11023.1261-18D48.74
eyeball, neonate N00.CNhs11207.633-15C69.73
eyeball, neonate N01.CNhs11140.1532-43E78.20
eyeball, neonate N02.CNhs11205.1551-44G89.84
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E218.75
forelimb, embryo E12.CNhs10600.359-14H213.05
forelimb, embryo E13.CNhs10589.384-1E27.39
forelimb, embryo E14.CNhs10577.413-26A83.51
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I65.97
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E93.73
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D44.02
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E86.73
hippocampus, neonate N00.CNhs11228.627-43G18.85
intestinal mucosa, adult.CNhs10506.860-29I35.29
intestine, adult.CNhs10496.178-9A34.23
intestine, embryo E12.CNhs11019.1251-16I510.24
intestine, embryo E13.CNhs11010.381-16D512.08
intestine, embryo E15.CNhs10602.976-16D87.47
intestine, embryo E16.CNhs10585.463-22H44.03
intestine, embryo E17.CNhs10582.482-18D35.78
intestine, embryo E18.CNhs10526.1289-20F76.09
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E94.12
intestine, neonate N06.CNhs11102.688-20B84.78
intestine, neonate N07.CNhs11095.720-20F22.79
intestine, neonate N10.CNhs11098.755-23A54.09
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E33.24
intestine, neonate N30.CNhs11131.1384-42G12.19
kidney, embryo E14.CNhs10606.411-4I95.50
kidney, embryo E15.CNhs10997.434-16F86.28
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I25.91
kidney, embryo E18.CNhs11001.1288-20C74.65
kidney, neonate N00.CNhs11214.646-21G72.60
kidney, neonate N10.CNhs11206.758-6D53.10
kidney, neonate N20.CNhs11113.832-19I11.77
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H11.48
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G210.99
lung, embryo E14.CNhs10604.404-26F84.40
lung, embryo E15.CNhs11020.432-17C58.15
lung, embryo E16.CNhs10998.458-17B63.76
lung, embryo E17.CNhs10605.480-44A64.69
lung, embryo E18.CNhs10583.1287-20I66.19
lung, neonate N00.CNhs11224.640-42C65.46
lung, neonate N06.CNhs11212.683-20E55.99
lung, neonate N07.CNhs11111.715-19A33.54
lung, neonate N10.CNhs11219.750-23E65.10
lung, neonate N20.CNhs11109.822-18A42.46
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C28.99
medulla oblongata, neonate N30.CNhs11200.1396-42A39.96
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.42
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.34
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.93
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.91
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.47
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.77
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.07
olfactory brain, adult.CNhs10489.18-22I923.46
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H72.85
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F44.37
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E67.20
pituitary gland, embryo E13.CNhs11009.370-44C77.50
pituitary gland, embryo E14.CNhs11037.398-44A57.07
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F65.89
pituitary gland, embryo E17.CNhs11039.1265-44F54.28
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I712.67
placenta, adult pregnant day17.CNhs10464.577-18G322.03
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C98.90
spleen, adult.CNhs10465.25-2G22.22
spleen, embryo E16.CNhs11035.461-43C17.22
spleen, embryo E18.CNhs11011.1271-21F23.52
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G32.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E310.44
stomach, embryo E15.CNhs10603.1252-16G84.68
stomach, embryo E16.CNhs11022.459-17D43.89
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I14.28
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F55.38
testis, embryo E15.CNhs11034.443-27C53.97
testis, embryo E16.CNhs11033.470-26G54.47
testis, embryo E17.CNhs11029.486-18I54.26
testis, embryo E18.CNhs11027.503-18G52.37
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I41.82
testis, neonate N10.CNhs11204.763-44D92.31
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I44.66
thymus, embryo E15.CNhs11005.430-45I23.08
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C12.86
thymus, embryo E18.CNhs10595.1273-19G42.19
thymus, neonate N02.CNhs11181.1541-43F81.56
thymus, neonate N03.CNhs11137.2104-43C72.51
thymus, neonate N06.CNhs11197.681-26C42.93
thymus, neonate N07.CNhs11211.713-19D33.05
thymus, neonate N10.CNhs11194.748-24E43.13
thymus, neonate N20.CNhs11186.820-7A23.70
thymus, neonate N25.CNhs11125.1362-25G74.23
thymus, neonate N30.CNhs11132.1393-42G22.92
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.56
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G510.24
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.48
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.87
whole body, embryo E11.CNhs11014.324-5I813.08
whole body, embryo E12.CNhs10587.857-27C911.17
whole body, embryo E13.CNhs10512.372-23H29.90
whole body, embryo E14.5.CNhs10578.420-27D26.56
whole body, embryo E14.CNhs10519.395-14B16.29
whole body, embryo E16.CNhs10514.453-14F28.46
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.85
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.74
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.49
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.90
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.44
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.85
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.01
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.13
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.70
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.89
whole body, embryo E17.5.CNhs10513.490-9F94.44
whole body, embryo E17.CNhs10517.475-3I519.74
whole body, embryo E18.CNhs10516.493-3B35.15
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.81e-1633
neuronal stem cell1.81e-1633
neuroblast1.81e-1633
electrically signaling cell1.81e-1633
CNS neuron (sensu Vertebrata)2.50e-1423
neuroblast (sensu Vertebrata)2.50e-1423
electrically responsive cell1.27e-1239
electrically active cell1.27e-1239
neural cell4.87e-1243
ectodermal cell9.13e-1244
neurectodermal cell9.13e-1244

Uber anatomy
Ontology termp-valuen
nervous system1.47e-2075
central nervous system5.92e-2073
neurectoderm3.55e-1664
neural plate3.55e-1664
presumptive neural plate3.55e-1664
ectoderm-derived structure3.64e-1595
ectoderm3.64e-1595
presumptive ectoderm3.64e-1595
regional part of nervous system8.08e-1554
neural tube7.68e-1452
neural rod7.68e-1452
future spinal cord7.68e-1452
neural keel7.68e-1452
gray matter5.49e-1334
pre-chordal neural plate6.16e-1349
anterior neural tube6.92e-1240
brain9.02e-1247
future brain9.02e-1247
regional part of forebrain2.42e-1139
forebrain2.42e-1139
future forebrain2.42e-1139
regional part of brain3.34e-1146
brain grey matter1.16e-1029
regional part of telencephalon1.16e-1029
telencephalon1.16e-1029
ecto-epithelium1.59e-1073
structure with developmental contribution from neural crest1.20e-0792
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