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FFCP PHASE1:Mm9::chr7:104991598..104991618,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18479
|EntrezGene=18479
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=O88643,Q8K0Z3
|UniProt=O88643,Q8K0Z3
|association_with_transcript=149bp_to_NM_011035,uc009ijv.1,uc009ijw.1_5end
|association_with_transcript=149bp_to_NM_011035,uc009ijv.1,uc009ijw.1_5end
|cluster_id=chr7:104991598..104991618,+
|description=CAGE_peak_4_at_Pak1_5end
|description=CAGE_peak_4_at_Pak1_5end
|id=chr7:104991598..104991618,+
|id=chr7:104991598..104991618,+
|ontology_enrichment_celltype=CL:0000117!5.13e-11!23;CL:0000337!5.13e-11!23;CL:0000540!1.18e-09!33;CL:0000047!1.18e-09!33;CL:0000031!1.18e-09!33;CL:0000404!1.18e-09!33
|ontology_enrichment_celltype=CL:0000117!5.13e-11!23;CL:0000337!5.13e-11!23;CL:0000540!1.18e-09!33;CL:0000047!1.18e-09!33;CL:0000031!1.18e-09!33;CL:0000404!1.18e-09!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.83e-14,23;CL:0000337,2.83e-14,23;CL:0000540,7.14e-08,33;CL:0000047,7.14e-08,33;CL:0000031,7.14e-08,33;CL:0000404,7.14e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!2.39e-24!102;UBERON:0000924!2.39e-24!102;UBERON:0006601!2.39e-24!102;UBERON:0000033!4.53e-23!63;UBERON:0001017!3.41e-21!73;UBERON:0005743!3.41e-21!73;UBERON:0001049!4.23e-21!52;UBERON:0005068!4.23e-21!52;UBERON:0006241!4.23e-21!52;UBERON:0007135!4.23e-21!52;UBERON:0002346!1.30e-20!71;UBERON:0003075!1.30e-20!71;UBERON:0007284!1.30e-20!71;UBERON:0000073!3.05e-20!75;UBERON:0001016!3.05e-20!75;UBERON:0000955!3.61e-20!50;UBERON:0006238!3.61e-20!50;UBERON:0002616!1.50e-19!49;UBERON:0003056!8.35e-18!49;UBERON:0002020!6.08e-17!34;UBERON:0003080!1.41e-16!40;UBERON:0002780!6.65e-16!39;UBERON:0001890!6.65e-16!39;UBERON:0006240!6.65e-16!39;UBERON:0007811!8.18e-15!86;UBERON:0000153!9.00e-15!94;UBERON:0002791!1.81e-14!29;UBERON:0003528!1.81e-14!29;UBERON:0001893!1.81e-14!29;UBERON:0000956!2.75e-10!21;UBERON:0001869!2.75e-10!21;UBERON:0000203!2.75e-10!21;UBERON:0002619!9.77e-09!17;UBERON:0002021!2.10e-08!10;UBERON:0000411!2.10e-08!10;UBERON:0001950!2.10e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.56e-26,54;UBERON:0001049,5.43e-25,52;UBERON:0005068,5.43e-25,52;UBERON:0006241,5.43e-25,52;UBERON:0007135,5.43e-25,52;UBERON:0002346,2.20e-24,64;UBERON:0003075,2.20e-24,64;UBERON:0007284,2.20e-24,64;UBERON:0010371,1.33e-23,73;UBERON:0004121,1.95e-23,95;UBERON:0000924,1.95e-23,95;UBERON:0006601,1.95e-23,95;UBERON:0002020,1.03e-22,34;UBERON:0001017,3.17e-21,73;UBERON:0000955,4.04e-21,47;UBERON:0006238,4.04e-21,47;UBERON:0002616,2.76e-20,46;UBERON:0001016,3.35e-20,75;UBERON:0003528,4.12e-19,29;UBERON:0002791,4.12e-19,29;UBERON:0001893,4.12e-19,29;UBERON:0003056,4.59e-19,49;UBERON:0003080,9.73e-18,40;UBERON:0002780,7.83e-17,39;UBERON:0001890,7.83e-17,39;UBERON:0006240,7.83e-17,39;UBERON:0010314,1.22e-13,92;UBERON:0000956,4.69e-13,21;UBERON:0001869,4.69e-13,21;UBERON:0000203,4.69e-13,21;UBERON:0002021,1.42e-11,10;UBERON:0000411,1.42e-11,10;UBERON:0001950,1.42e-11,10;UBERON:0002619,8.64e-11,17;UBERON:0003076,7.12e-08,12;UBERON:0003057,7.12e-08,12;UBERON:0002420,2.56e-07,8;UBERON:0007245,2.56e-07,8;UBERON:0010009,2.56e-07,8;UBERON:0010011,2.56e-07,8;UBERON:0000454,2.56e-07,8
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,2.89147186513637,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0.485510353031154,0,0,0.183546752161682,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,1.01158230429799,3.70293685490423,3.1691570175309,0,0,0,0,0,0,0,1.34796496001021,1.08004750665353,2.73422449756797,7.7125765789027,5.30084498283872,2.32732518508413,1.72521847832825,0.919218786610021,5.50579404996943,11.4918604276669,10.752457327937,1.58263545276233,3.11057988248193,2.6045668527838,13.6799669510677,3.93933827022176,9.77908785771585,2.35702868378934,3.27454865837937,1.86399445825301,0,0.151143120213571,0.869593466105033,0,0,0,0,0,3.08977724289854,0.340860645156116,0.259786004602869,0.35333957451034,1.26759077799012,0,2.54805239706646,0,0,0.253359865475099,0,0.79928715803342,0.258937883647172,0.742210695324124,0,0.608930956624282,0.230615497256059,0.301445281105245,0.470354828542819,0.125666591329675,0,0,0.884610551949874,4.69123864847487,6.62524555381181,5.33362778448744,0,35.4264764383972,34.3492599174066,0,0.11981512450592,0,0.254140454146129,21.2702707954848,13.2675174817402,6.91098936620754,31.8098505951866,19.4343747571051,13.5062228963714,12.4925772562173,0.305518091550949,0.622034853050465,0.505445516867349,0.631325567659422,0.130120442962704,0,1.80062129805349,1.65775299619287,2.24520447199382,2.562274405697,1.3118241438362,2.32833033665114,0.215567992932842,0.945530400839096,0.175951124163949,0,0.278047249225598,0.348252166522167,1.23469281844766,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3511662451813,5.76265829323993,0,0,0,1.16118335930219,0.257734922644187,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0,0,0.407302655690628,0,0.210407459670956,0.189709611372772,0.590440591918409,0.156998727841375,0,0,0,0.393117990226406,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0.518054945597687,0.144649058581512,0,0,0.491764273019036,0.551873492609465,34.0367250774119,28.7168632150898,0,12.6235463602186,0.315508219416257,0,0.430846795465598,0.238968797952552,0.222798674082394,0.849229592366497,0.404810701674894,0.292255857911312,0.395287777946524,8.03303291054518,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0.712994756769443,0,0,0,2.38307724027652,0.900305470156551,0.646793418913773,0.214337035031592,0.177340233642274,0.713475270408282,0.493647061806363,1.2178597964584,0,0,5.73373834942901,3.79238381765404,0.968786560175433,0.72375509913787,1.55184047204077,1.47726809770555,0,45.0583483885539,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,1.18805874903981,0.627264888043406,0.655087691238533,1.21377911746339,0.661227645802687,0.523511883968059,0.259229946583586,1.86401793926078,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0.864090018773596,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0.39736270956253,0.240390899039938,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0.233753804363138,8.61575457737803,0,0,0.167884616364078,0.386379188064381,0.187682475451182,0,0.857473516316263,0,29.3670958160875,23.476587061866,26.3531936182122,21.8253541576483,27.4033007908257,24.9279986138601,20.2506750069542,30.621841819247,31.2668262199101,30.5478583933574,1.14166082342594,1.19707462020309,0.853668028770671,1.21553358534147,0.628839487883947,0.919217542250071,1.33348036680969,1.64828045791115,0.962757628775446,1.01078884705519,1.01391719956096,1.69763707247469,1.40462261204824,1.79270426733634,1.55075766180156,0.476293691283074,0.927074607558844,1.54327376370964,2.06042950401653,1.17759136107518,2.05721551431249,1.24233064311536,0.715308569841963,2.18019624948493,1.31753132581463,1.09998990259179,2.0122077016005,1.57841826862706,1.90125759384206,1.12228454331548,1.18635018124174,1.28055827088233,1.22769312950907,2.01417893541756,1.35034627686799,2.74791635731741,1.40358965067245,1.71896843238639,1.3390183244819,6.39715115446595,15.0714093153274
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,2.89147186513637,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0.485510353031154,0,0,0.183546752161682,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,1.01158230429799,3.70293685490423,3.1691570175309,0,0,0,0,0,0,0,1.34796496001021,1.08004750665353,2.73422449756797,7.7125765789027,5.30084498283872,2.32732518508413,1.72521847832825,0.919218786610021,5.50579404996943,11.4918604276669,10.752457327937,1.58263545276233,3.11057988248193,2.6045668527838,13.6799669510677,3.93933827022176,9.77908785771585,2.35702868378934,3.27454865837937,1.86399445825301,0,0.151143120213571,0.869593466105033,0,0,0,0,0,3.08977724289854,0.340860645156116,0.259786004602869,0.35333957451034,1.26759077799012,0,2.54805239706646,0,0,0.253359865475099,0,0.79928715803342,0.258937883647172,0.742210695324124,0,0.608930956624282,0.230615497256059,0.301445281105245,0.470354828542819,0.125666591329675,0,0,0.884610551949874,4.69123864847487,6.62524555381181,5.33362778448744,0,35.4264764383972,34.3492599174066,0,0.11981512450592,0,0.254140454146129,21.2702707954848,13.2675174817402,6.91098936620754,31.8098505951866,19.4343747571051,13.5062228963714,12.4925772562173,0.305518091550949,0.622034853050465,0.505445516867349,0.631325567659422,0.130120442962704,0,1.80062129805349,1.65775299619287,2.24520447199382,2.562274405697,1.3118241438362,2.32833033665114,0.215567992932842,0.945530400839096,0.175951124163949,0,0.278047249225598,0.348252166522167,1.23469281844766,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3511662451813,5.76265829323993,0,0,0,1.16118335930219,0.257734922644187,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0,0,0.407302655690628,0,0.210407459670956,0.189709611372772,0.590440591918409,0.156998727841375,0,0,0,0.393117990226406,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0.518054945597687,0.144649058581512,0,0,0.491764273019036,0.551873492609465,34.0367250774119,28.7168632150898,0,12.6235463602186,0.315508219416257,0,0.430846795465598,0.238968797952552,0.222798674082394,0.849229592366497,0.404810701674894,0.292255857911312,0.395287777946524,8.03303291054518,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0.712994756769443,0,0,0,2.38307724027652,0.900305470156551,0.646793418913773,0.214337035031592,0.177340233642274,0.713475270408282,0.493647061806363,1.2178597964584,0,0,5.73373834942901,3.79238381765404,0.968786560175433,0.72375509913787,1.55184047204077,1.47726809770555,0,45.0583483885539,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,1.18805874903981,0.627264888043406,0.655087691238533,1.21377911746339,0.661227645802687,0.523511883968059,0.259229946583586,1.86401793926078,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0.864090018773596,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0.39736270956253,0.240390899039938,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0.233753804363138,8.61575457737803,0,0,0.167884616364078,0.386379188064381,0.187682475451182,0,0.857473516316263,0,29.3670958160875,23.476587061866,26.3531936182122,21.8253541576483,27.4033007908257,24.9279986138601,20.2506750069542,30.621841819247,31.2668262199101,30.5478583933574,1.14166082342594,1.19707462020309,0.853668028770671,1.21553358534147,0.628839487883947,0.919217542250071,1.33348036680969,1.64828045791115,0.962757628775446,1.01078884705519,1.01391719956096,1.69763707247469,1.40462261204824,1.79270426733634,1.55075766180156,0.476293691283074,0.927074607558844,1.54327376370964,2.06042950401653,1.17759136107518,2.05721551431249,1.24233064311536,0.715308569841963,2.18019624948493,1.31753132581463,1.09998990259179,2.0122077016005,1.57841826862706,1.90125759384206,1.12228454331548,1.18635018124174,1.28055827088233,1.22769312950907,2.01417893541756,1.35034627686799,2.74791635731741,1.40358965067245,1.71896843238639,1.3390183244819,6.39715115446595,15.0714093153274
|short_description=p4@Pak1
|short_description=p4@Pak1
}}
}}

Latest revision as of 13:47, 25 September 2015

Short description:p4@Pak1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Pak1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 149bp_to_NM_011035, uc009ijv.1, uc009ijw.1_5end
EntrezGene:Pak1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Pak1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.49
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.75
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.11
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.78
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F54.69
bone (os femoris), neonate N16.CNhs11225.1525-43A66.63
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B235.43
cerebellum, neonate N30.CNhs11135.1395-42I234.35
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A421.27
corpus striatum, adult.CNhs10487.19-21D813.27
corpus striatum, neonate N00.CNhs11226.630-43F16.91
cortex, adult.CNhs10473.12-14D531.81
cortex, neonate N30.CNhs11107.1392-42F219.43
diencephalon, adult.CNhs10482.20-12F213.51
diencephalon, neonate N30.CNhs11201.1388-42B212.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C62.25
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E815.35
hippocampus, neonate N00.CNhs11228.627-43G15.76
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C234.04
medulla oblongata, neonate N30.CNhs11200.1396-42A328.72
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C212.62
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I98.03
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F85.73
skin, adult.CNhs10492.30-1C33.79
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C945.06
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B48.62
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A129.37
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A223.48
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A326.35
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D721.83
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A427.40
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A524.93
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A620.25
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A730.62
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A831.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A930.55
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D16.40
whole body, neonate N10.CNhs10518.761-6B415.07





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.83e-1423
neuroblast (sensu Vertebrata)2.83e-1423
neuron7.14e-0833
neuronal stem cell7.14e-0833
neuroblast7.14e-0833
electrically signaling cell7.14e-0833

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.56e-2654
neural tube5.43e-2552
neural rod5.43e-2552
future spinal cord5.43e-2552
neural keel5.43e-2552
neurectoderm2.20e-2464
neural plate2.20e-2464
presumptive neural plate2.20e-2464
ecto-epithelium1.33e-2373
ectoderm-derived structure1.95e-2395
ectoderm1.95e-2395
presumptive ectoderm1.95e-2395
gray matter1.03e-2234
central nervous system3.17e-2173
brain4.04e-2147
future brain4.04e-2147
regional part of brain2.76e-2046
nervous system3.35e-2075
brain grey matter4.12e-1929
regional part of telencephalon4.12e-1929
telencephalon4.12e-1929
pre-chordal neural plate4.59e-1949
anterior neural tube9.73e-1840
regional part of forebrain7.83e-1739
forebrain7.83e-1739
future forebrain7.83e-1739
structure with developmental contribution from neural crest1.22e-1392
cerebral cortex4.69e-1321
cerebral hemisphere4.69e-1321
pallium4.69e-1321
occipital lobe1.42e-1110
visual cortex1.42e-1110
neocortex1.42e-1110
regional part of cerebral cortex8.64e-1117
posterior neural tube7.12e-0812
chordal neural plate7.12e-0812
basal ganglion2.56e-078
nuclear complex of neuraxis2.56e-078
aggregate regional part of brain2.56e-078
collection of basal ganglia2.56e-078
cerebral subcortex2.56e-078
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