FFCP PHASE1:Mm9::chr19:34267178..34267213,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76630 | |EntrezGene=76630 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z0S7 | |UniProt=D3Z0S7 | ||
|association_with_transcript=-98bp_to_ENSMUST00000129535_5end | |association_with_transcript=-98bp_to_ENSMUST00000129535_5end | ||
|cluster_id=chr19:34267178..34267213,+ | |||
|description=CAGE_peak_3_at_Stambpl1_5end | |description=CAGE_peak_3_at_Stambpl1_5end | ||
|id=chr19:34267178..34267213,+ | |id=chr19:34267178..34267213,+ | ||
|ontology_enrichment_celltype=CL:0000838!1.12e-07!12;CL:0000084!4.72e-07!11;CL:0000827!4.72e-07!11 | |ontology_enrichment_celltype=CL:0000838!1.12e-07!12;CL:0000084!4.72e-07!11;CL:0000827!4.72e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,6.14e-09,12;CL:0002031,6.65e-09,25;CL:0000084,3.47e-08,11;CL:0000827,3.47e-08,11;CL:0000542,7.89e-08,13;CL:0000051,7.89e-08,13;CL:0000988,1.66e-07,32;CL:0002032,1.66e-07,32;CL:0000037,1.66e-07,32;CL:0000837,1.66e-07,32;CL:0000738,2.75e-07,17;CL:0002087,2.75e-07,17;CL:0000791,4.74e-07,9;CL:0000789,4.74e-07,9;CL:0002420,4.74e-07,9;CL:0002419,4.74e-07,9;CL:0000790,4.74e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.60e-12!48;UBERON:0002390!1.25e-10!45;UBERON:0003061!1.25e-10!45;UBERON:0004177!3.77e-08!29;UBERON:0002405!8.86e-08!70;UBERON:0002370!4.12e-07!23;UBERON:0000974!4.12e-07!23;UBERON:0004807!4.12e-07!23;UBERON:0005058!4.12e-07!23;UBERON:0003351!4.12e-07!23;UBERON:0009113!4.12e-07!23;UBERON:0003295!4.12e-07!23;UBERON:0009722!4.12e-07!23;UBERON:0005562!4.12e-07!23;UBERON:0007690!4.12e-07!23 | |ontology_enrichment_uberon=UBERON:0002193!7.60e-12!48;UBERON:0002390!1.25e-10!45;UBERON:0003061!1.25e-10!45;UBERON:0004177!3.77e-08!29;UBERON:0002405!8.86e-08!70;UBERON:0002370!4.12e-07!23;UBERON:0000974!4.12e-07!23;UBERON:0004807!4.12e-07!23;UBERON:0005058!4.12e-07!23;UBERON:0003351!4.12e-07!23;UBERON:0009113!4.12e-07!23;UBERON:0003295!4.12e-07!23;UBERON:0009722!4.12e-07!23;UBERON:0005562!4.12e-07!23;UBERON:0007690!4.12e-07!23 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.69e-13,48;UBERON:0002405,1.69e-13,48;UBERON:0002390,4.78e-12,45;UBERON:0003061,4.78e-12,45;UBERON:0004177,3.91e-10,29;UBERON:0005057,3.91e-10,29;UBERON:0002370,2.62e-09,23;UBERON:0000974,2.62e-09,23;UBERON:0004807,2.62e-09,23;UBERON:0005058,2.62e-09,23;UBERON:0003351,2.62e-09,23;UBERON:0009113,2.62e-09,23;UBERON:0003295,2.62e-09,23;UBERON:0009722,2.62e-09,23;UBERON:0005562,2.62e-09,23;UBERON:0007690,2.62e-09,23;UBERON:0000072,1.16e-08,27;UBERON:0006562,1.45e-08,24;UBERON:0003408,1.45e-08,24;UBERON:0001557,1.45e-08,24;UBERON:0001042,1.45e-08,24;UBERON:0008814,1.45e-08,24;UBERON:0009145,1.45e-08,24;UBERON:0000077,1.95e-07,35 | |||
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|phase1_expression=0.160148847104794,1.74487703819681,1.36499771816861,1.51232105653415,2.00358291978539,1.34303417529512,2.33612640595526,13.0414556675992,4.08287294239834,3.7450324211519,4.45166717386313,2.31339261086476,10.9568467155972,7.16847299835779,1.66554880907831,2.63217847606774,2.79824751251259,11.8298312009339,15.0825876966313,8.91218268775863,1.44573593256819,3.77305614563364,4.17919662622297,2.3998863419011,2.06468352960453,1.14846392823004,1.29228598847722,1.07735616342945,4.18051522804023,2.01624103807945,1.55211357458713,0,0,0,0.577703239502549,0.664938581433969,1.22501613757421,9.62622750694888,7.813353445238,7.85285615960697,13.5293242247133,15.0270006690858,12.1377588257788,0.629484089877886,1.21652317463417,1.65192076945513,0,0.872100625521786,0.219686182734472,0.388859798148567,0.139986421625363,0,12.2481302422148,5.80289713609076,6.38578218370682,2.05807548828758,1.43266719969378,0.515672092277442,0.202316460859598,0,0,0.338844532069132,0,2.2497492932035,0.988866362566974,1.4209602298922,0.599200221036809,0,0,0,0.210324961351382,1.42825492201902,0.883474163806454,0.61245399607477,0.0958454710182364,0,3.30347642998166,2.93680877595932,3.99376986466233,0,0.0914876436024097,0,3.07101298901519,2.25105044012672,1.37518422999129,0.883885756421003,0.996601765593721,1.3047961207771,0.37863096666592,0.906858721281426,1.73918693221007,0,0.679971333707751,0,0,0,0.421333260395256,1.02258193546835,0.519572009205738,0.70667914902068,0.281686839553361,0,0,0,1.29894624606728,1.26679932737549,1.51657333504435,1.7127581957859,12.4290184150642,1.1875371125186,0.173485326766136,0.304465478312141,0.691846491768175,0.452167921657868,0.23517741427141,0.376999773989026,0.247194967734374,1.01219549843938,3.5384422077995,1.13236794963186,4.19598885074748,3.39412677194655,0,0.585561594023094,0.628340120440365,1.53274233125155,0.479260498023681,2.99951365496704,1.65191295194984,3.2953940669061,1.37250180845588,0.125654352112864,2.25971616249959,2.81287003063364,4.1557608911912,1.62241263067758,0.101839363850316,3.35898820647251,0,0.631325567659422,0.130120442962704,0,0.180062129805349,0.150704817835715,0.272145996605311,0.2562274405697,0.187403449119458,1.03481348295606,0.646703978798527,0.756424320671277,0.527853372491847,0,0.278047249225598,0.696504333044333,0.823128545631774,0,0.702213187313235,0.772043721344145,2.27330799516474,0.414251545071004,0.703578179943289,0.36012412292203,0,0.787056926989615,0.771335564436891,1.39520366850245,1.07309360559848,0.583826711835847,1.6455984991348,1.31333971263276,1.37816976227955,0.877199924551994,1.53685080703735,0.805238512562231,2.10289948564127,0.617427674275707,0.330418782983798,2.64450566663544,0,0.232236671860439,0.644337306610467,2.42020229548011,2.00140239460383,1.52180500890047,1.42358718463353,0.658795818896044,2.26201687920243,2.18852119245266,1.36474860983384,0,1.94524244887225,1.59313018603494,0,0,1.1270773567308,0.203651327845314,0.193952487167626,0,0.442655759869801,0.147610147979602,0.627994911365499,1.23397163921801,0.889357881261447,0,0.196558995113203,0.449724224769707,0.811440485554012,1.4470629585145,1.78238096246994,1.43848068725405,1.13494658742525,1.92192989231657,0,1.86070473834252,1.5601883655728,1.76805214562978,0.358794827043824,0.964887042726734,1.47802552133284,0.189491411770485,0.162964976442026,0.169745085775188,0.469380496577004,0.837531287209079,0.714130922658041,0.780534591431195,0.630540576424764,0.664394068946325,1.43509291791738,1.63863314715738,1.89953480052485,0.867894351489069,6.03165135757089,4.35124547054968,0.491764273019036,1.10374698521893,3.85321415970701,3.7507739709505,1.47541450839008,0.757412781613119,0,0,0,0,0.222798674082394,0.283076530788832,0.404810701674894,0,1.18586333383957,1.92792789853084,0.851640511249612,0,0.162886959353576,0.494910368917606,1.32745138339963,0.242780636154981,0.906970670894253,1.69744571780308,2.06711325016541,0.614870295887855,2.32585463851399,1.81766864738753,2.13898427030833,0.632073515871632,2.10837217149998,0,1.36175842301515,0.18006109403131,0.258717367565509,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0.220528398054962,0.16488625294148,0,0.361877549568935,0.477489376012546,0,1.1659233465194,3.8939313422207,3.2465467351592,1.23832120777933,0.740778109478847,1.50694765603753,3.00727300986255,4.11800711771741,2.03974115992626,3.63873776041511,2.48759952847963,2.86401185404534,0.158167996790568,1.01659733563424,0.540026704109006,0.418176592028937,0.87345025498471,1.34864346384821,1.40510874733071,3.40282724579238,1.55537967950151,0,0,0.448549638131936,0.330916980914195,0.777804753376191,1.03327858782185,1.520605129417,0.58678619322877,1.5624526181274,1.57289016638566,0,0,16.1165671520371,0.608175645870493,1.23253148597793,2.07873316764472,4.833720783022,5.76175928865668,8.05309511783791,8.4183030489509,12.317906893674,12.80274351804,11.4941851055998,12.3771508539486,14.8166236126107,19.518442664322,0.226730383615211,0,0.269141569828427,0,0.965947970160952,1.3137773281582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| ||
|short_description=p3@Stambpl1 | |short_description=p3@Stambpl1 | ||
}} | }} |
Latest revision as of 15:37, 25 September 2015
Short description: | p3@Stambpl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Stambpl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | -98bp_to_ENSMUST00000129535_5end |
EntrezGene: | Stambpl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 6.14e-09 | 12 |
hematopoietic lineage restricted progenitor cell | 6.65e-09 | 25 |
T cell | 3.47e-08 | 11 |
pro-T cell | 3.47e-08 | 11 |
lymphocyte | 7.89e-08 | 13 |
common lymphoid progenitor | 7.89e-08 | 13 |
hematopoietic cell | 1.66e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.66e-07 | 32 |
hematopoietic stem cell | 1.66e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.66e-07 | 32 |
leukocyte | 2.75e-07 | 17 |
nongranular leukocyte | 2.75e-07 | 17 |
mature alpha-beta T cell | 4.74e-07 | 9 |
alpha-beta T cell | 4.74e-07 | 9 |
immature T cell | 4.74e-07 | 9 |
mature T cell | 4.74e-07 | 9 |
immature alpha-beta T cell | 4.74e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.69e-13 | 48 |
immune system | 1.69e-13 | 48 |
hematopoietic system | 4.78e-12 | 45 |
blood island | 4.78e-12 | 45 |
hemopoietic organ | 3.91e-10 | 29 |
immune organ | 3.91e-10 | 29 |
thymus | 2.62e-09 | 23 |
neck | 2.62e-09 | 23 |
respiratory system epithelium | 2.62e-09 | 23 |
hemolymphoid system gland | 2.62e-09 | 23 |
pharyngeal epithelium | 2.62e-09 | 23 |
thymic region | 2.62e-09 | 23 |
pharyngeal gland | 2.62e-09 | 23 |
entire pharyngeal arch endoderm | 2.62e-09 | 23 |
thymus primordium | 2.62e-09 | 23 |
early pharyngeal endoderm | 2.62e-09 | 23 |
segment of respiratory tract | 1.16e-08 | 27 |
pharynx | 1.45e-08 | 24 |
gland of gut | 1.45e-08 | 24 |
upper respiratory tract | 1.45e-08 | 24 |
chordate pharynx | 1.45e-08 | 24 |
pharyngeal arch system | 1.45e-08 | 24 |
pharyngeal region of foregut | 1.45e-08 | 24 |
mixed endoderm/mesoderm-derived structure | 1.95e-07 | 35 |