FFCP PHASE1:Mm9::chr1:179374784..179374800,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=30928 | |EntrezGene=30928 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=923 | |||
|TSSclassifier=NA | |||
|UniProt=Q9WUK6 | |UniProt=Q9WUK6 | ||
|association_with_transcript=0bp_to_ENSMUST00000094276,NM_001012330,uc007dum.1,uc007dun.1_5end | |association_with_transcript=0bp_to_ENSMUST00000094276,NM_001012330,uc007dum.1,uc007dun.1_5end | ||
|cluster_id=chr1:179374784..179374800,+ | |||
|description=CAGE_peak_2_at_Zfp238_5end | |description=CAGE_peak_2_at_Zfp238_5end | ||
|id=chr1:179374784..179374800,+ | |id=chr1:179374784..179374800,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.25e-12!33;CL:0000047!1.25e-12!33;CL:0000031!1.25e-12!33;CL:0000404!1.25e-12!33;CL:0000393!2.06e-08!39;CL:0000211!2.06e-08!39;CL:0000221!2.52e-08!44;CL:0000133!2.52e-08!44;CL:0000117!2.70e-08!23;CL:0000337!2.70e-08!23;CL:0002319!3.43e-08!43 | |ontology_enrichment_celltype=CL:0000540!1.25e-12!33;CL:0000047!1.25e-12!33;CL:0000031!1.25e-12!33;CL:0000404!1.25e-12!33;CL:0000393!2.06e-08!39;CL:0000211!2.06e-08!39;CL:0000221!2.52e-08!44;CL:0000133!2.52e-08!44;CL:0000117!2.70e-08!23;CL:0000337!2.70e-08!23;CL:0002319!3.43e-08!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.10e-16,33;CL:0000047,6.10e-16,33;CL:0000031,6.10e-16,33;CL:0000404,6.10e-16,33;CL:0000393,6.92e-12,39;CL:0000211,6.92e-12,39;CL:0000117,3.68e-10,23;CL:0000337,3.68e-10,23;CL:0002319,7.22e-10,43;CL:0000221,1.99e-09,44;CL:0000133,1.99e-09,44;CL:0002609,2.09e-07,6;CL:0000107,6.17e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.03e-18!63;UBERON:0001017!2.90e-18!73;UBERON:0005743!2.90e-18!73;UBERON:0000073!6.28e-18!75;UBERON:0001016!6.28e-18!75;UBERON:0003056!4.69e-17!49;UBERON:0002346!1.28e-16!71;UBERON:0003075!1.28e-16!71;UBERON:0007284!1.28e-16!71;UBERON:0002616!3.51e-16!49;UBERON:0000955!4.33e-16!50;UBERON:0006238!4.33e-16!50;UBERON:0004121!6.73e-16!102;UBERON:0000924!6.73e-16!102;UBERON:0006601!6.73e-16!102;UBERON:0002791!1.70e-15!29;UBERON:0003528!1.70e-15!29;UBERON:0001893!1.70e-15!29;UBERON:0002020!7.02e-15!34;UBERON:0002780!1.86e-14!39;UBERON:0001890!1.86e-14!39;UBERON:0006240!1.86e-14!39;UBERON:0001049!2.12e-14!52;UBERON:0005068!2.12e-14!52;UBERON:0006241!2.12e-14!52;UBERON:0007135!2.12e-14!52;UBERON:0003080!3.76e-14!40;UBERON:0000956!4.53e-13!21;UBERON:0001869!4.53e-13!21;UBERON:0000203!4.53e-13!21;UBERON:0000153!6.16e-11!94;UBERON:0007811!2.69e-10!86;UBERON:0002619!3.75e-10!17;UBERON:0002021!5.15e-08!10;UBERON:0000411!5.15e-08!10;UBERON:0001950!5.15e-08!10 | |ontology_enrichment_uberon=UBERON:0000033!1.03e-18!63;UBERON:0001017!2.90e-18!73;UBERON:0005743!2.90e-18!73;UBERON:0000073!6.28e-18!75;UBERON:0001016!6.28e-18!75;UBERON:0003056!4.69e-17!49;UBERON:0002346!1.28e-16!71;UBERON:0003075!1.28e-16!71;UBERON:0007284!1.28e-16!71;UBERON:0002616!3.51e-16!49;UBERON:0000955!4.33e-16!50;UBERON:0006238!4.33e-16!50;UBERON:0004121!6.73e-16!102;UBERON:0000924!6.73e-16!102;UBERON:0006601!6.73e-16!102;UBERON:0002791!1.70e-15!29;UBERON:0003528!1.70e-15!29;UBERON:0001893!1.70e-15!29;UBERON:0002020!7.02e-15!34;UBERON:0002780!1.86e-14!39;UBERON:0001890!1.86e-14!39;UBERON:0006240!1.86e-14!39;UBERON:0001049!2.12e-14!52;UBERON:0005068!2.12e-14!52;UBERON:0006241!2.12e-14!52;UBERON:0007135!2.12e-14!52;UBERON:0003080!3.76e-14!40;UBERON:0000956!4.53e-13!21;UBERON:0001869!4.53e-13!21;UBERON:0000203!4.53e-13!21;UBERON:0000153!6.16e-11!94;UBERON:0007811!2.69e-10!86;UBERON:0002619!3.75e-10!17;UBERON:0002021!5.15e-08!10;UBERON:0000411!5.15e-08!10;UBERON:0001950!5.15e-08!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.66e-20,73;UBERON:0003528,9.54e-20,29;UBERON:0002791,9.54e-20,29;UBERON:0001893,9.54e-20,29;UBERON:0002346,3.05e-19,64;UBERON:0003075,3.05e-19,64;UBERON:0007284,3.05e-19,64;UBERON:0001016,6.06e-19,75;UBERON:0002020,1.89e-18,34;UBERON:0004121,1.98e-17,95;UBERON:0000924,1.98e-17,95;UBERON:0006601,1.98e-17,95;UBERON:0003056,4.48e-17,49;UBERON:0000956,1.87e-16,21;UBERON:0001869,1.87e-16,21;UBERON:0000203,1.87e-16,21;UBERON:0000073,4.37e-16,54;UBERON:0010371,1.60e-15,73;UBERON:0002616,3.93e-15,46;UBERON:0002780,1.24e-14,39;UBERON:0001890,1.24e-14,39;UBERON:0006240,1.24e-14,39;UBERON:0000955,1.53e-14,47;UBERON:0006238,1.53e-14,47;UBERON:0001049,2.69e-14,52;UBERON:0005068,2.69e-14,52;UBERON:0006241,2.69e-14,52;UBERON:0007135,2.69e-14,52;UBERON:0003080,5.51e-14,40;UBERON:0002619,1.46e-12,17;UBERON:0002021,3.12e-10,10;UBERON:0000411,3.12e-10,10;UBERON:0001950,3.12e-10,10;UBERON:0010314,4.30e-09,92;UBERON:0002410,6.17e-07,9 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0.788655413395594,0.411343300817216,0.84877930359606,8.58937230525805,0.0992909512008853,0.261199789138935,0,0.22940928106717,0,0,0,0,1.00812051903972,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.58328969722285,0,0,0.838913030288682,0,0,0,0,0,8.29497489524351,5.28990979272033,2.53532561402472,0.338844532069132,0,0,0,0,0,0,268.34871665434,230.590142670528,258.6997024622,0,0.662605622854841,106.07703212015,57.6031280819601,78.1335968618518,2.20231761998777,9.19348834213351,6.91229399653096,2.76961204233407,2.28719109006024,8.85552729946492,13.1216009530649,1.12552522006336,4.27835093775068,1.47314292736834,1.56608848879013,2.23679334990361,0.075726193333184,0.226714680320357,0,0,0,0,0,0,1.26399978118577,0,0,0,0.985903938436763,0,0,0,0,0,0,1.1418387971906,0,0,0.520455980298408,0,0.461230994512117,0.150722640552623,0.352766121407114,0,0,0,0.884610551949874,1.61766849947409,0.883366073841574,0,0,162.78612313842,259.504469741871,0,2.75574786363617,0,1.14363204365758,0.149790639404823,4.11750542536764,23.6230181972185,26.5951209894183,35.2887331115856,0.20778804455956,4.2182728397617,0.101839363850316,0.870848794270651,0,0.631325567659422,3.25301107406759,9.65588838620586,6.30217454318722,7.38453607395004,6.46346741937615,11.2740073850668,11.2442069471675,1.81092359517311,0.215567992932842,0.756424320671277,1.23165786914764,2.84954452155847,0.556094498451196,2.43776516565517,1.02891068203972,0,0,0,1.13665399758237,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,82.2233698885738,255.615057150143,0,0.264450566663544,0.213288250535234,1.16118335930219,0.38660238396628,0.201683524623343,0,0.380451252225118,1.42358718463353,0.164698954724011,0.502670417600539,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,0.296452627087149,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.947457058852424,0.162964976442026,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,1.76605648986571,3.04750385139728,0,1.76729649043061,11.9893123378178,7.80877488593277,11.6328634775711,9.31978312014953,11.8083297263669,12.7384438854975,12.5491317519217,11.6902343164525,13.0444966722353,0.321321316421807,0,0.35613120733451,0,0,1.32745138339963,1.69946445308487,0,0.188605079755898,0,0,0,0,0,0.948110273807448,3.16255825724996,2.06271086496374,0,1.44048875225048,0.776152102696527,0.643011105094777,0.354680467284547,0.891844088010353,0.329098041204242,1.2178597964584,0,0,0,0,0.645857706783622,0.482503399425247,0,0,0,0,0,0,0,0.753473828018764,0.683471138605126,0.228778173206523,0,0,0.138199973804424,0.954670618015114,0.949007980743406,0.609958401380546,0.324016022465404,0.209088296014469,0,0.134864346384821,0.41326727862668,0,0.259229946583586,0,0,0,0,0.194451188344048,0,0.168956125490778,0.117357238645754,0.2604087696879,0.104859344425711,0,0.288030006257865,0,0,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0.194915761479505,0.288635524920988,0.350630706544707,0.453460767230423,0,0,0,0,0,0,0,0,36.1441179274923,55.6993536173684,38.956894913879,36.2610214745181,32.1988784292202,26.4387864086395,33.7511250115903,25.6683085837806,22.6571204492102,19.1571315348173,4.15149390336707,2.79317411380722,7.68301225893604,10.2104821168684,10.2710449687711,9.55986243940074,10.4455962066759,10.3017528619447,13.1576875932644,10.1078884705519,8.11133759648767,10.1858224348481,12.0797544636148,12.8690556333787,13.0378514529242,13.8125170472091,14.2537720912172,12.9249177710682,16.071350131329,10.745521169811,10.2860775715625,11.5359274003569,14.3061713968393,13.3718703301742,11.0107975085937,14.2152541258017,10.9756783723664,8.94437018888666,11.0001332215148,8.41713407486608,10.202611558679,11.3280154731898,9.00308294973317,15.0288735950387,9.06661071611365,23.7320049041049,14.5037597236153,10.3138105943183,2.67803664896381,0.882365676478062,2.55054619182464 | |phase1_expression=1.44133962394315,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0.788655413395594,0.411343300817216,0.84877930359606,8.58937230525805,0.0992909512008853,0.261199789138935,0,0.22940928106717,0,0,0,0,1.00812051903972,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.58328969722285,0,0,0.838913030288682,0,0,0,0,0,8.29497489524351,5.28990979272033,2.53532561402472,0.338844532069132,0,0,0,0,0,0,268.34871665434,230.590142670528,258.6997024622,0,0.662605622854841,106.07703212015,57.6031280819601,78.1335968618518,2.20231761998777,9.19348834213351,6.91229399653096,2.76961204233407,2.28719109006024,8.85552729946492,13.1216009530649,1.12552522006336,4.27835093775068,1.47314292736834,1.56608848879013,2.23679334990361,0.075726193333184,0.226714680320357,0,0,0,0,0,0,1.26399978118577,0,0,0,0.985903938436763,0,0,0,0,0,0,1.1418387971906,0,0,0.520455980298408,0,0.461230994512117,0.150722640552623,0.352766121407114,0,0,0,0.884610551949874,1.61766849947409,0.883366073841574,0,0,162.78612313842,259.504469741871,0,2.75574786363617,0,1.14363204365758,0.149790639404823,4.11750542536764,23.6230181972185,26.5951209894183,35.2887331115856,0.20778804455956,4.2182728397617,0.101839363850316,0.870848794270651,0,0.631325567659422,3.25301107406759,9.65588838620586,6.30217454318722,7.38453607395004,6.46346741937615,11.2740073850668,11.2442069471675,1.81092359517311,0.215567992932842,0.756424320671277,1.23165786914764,2.84954452155847,0.556094498451196,2.43776516565517,1.02891068203972,0,0,0,1.13665399758237,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,82.2233698885738,255.615057150143,0,0.264450566663544,0.213288250535234,1.16118335930219,0.38660238396628,0.201683524623343,0,0.380451252225118,1.42358718463353,0.164698954724011,0.502670417600539,0.198956472041151,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,0.296452627087149,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.947457058852424,0.162964976442026,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,1.76605648986571,3.04750385139728,0,1.76729649043061,11.9893123378178,7.80877488593277,11.6328634775711,9.31978312014953,11.8083297263669,12.7384438854975,12.5491317519217,11.6902343164525,13.0444966722353,0.321321316421807,0,0.35613120733451,0,0,1.32745138339963,1.69946445308487,0,0.188605079755898,0,0,0,0,0,0.948110273807448,3.16255825724996,2.06271086496374,0,1.44048875225048,0.776152102696527,0.643011105094777,0.354680467284547,0.891844088010353,0.329098041204242,1.2178597964584,0,0,0,0,0.645857706783622,0.482503399425247,0,0,0,0,0,0,0,0.753473828018764,0.683471138605126,0.228778173206523,0,0,0.138199973804424,0.954670618015114,0.949007980743406,0.609958401380546,0.324016022465404,0.209088296014469,0,0.134864346384821,0.41326727862668,0,0.259229946583586,0,0,0,0,0.194451188344048,0,0.168956125490778,0.117357238645754,0.2604087696879,0.104859344425711,0,0.288030006257865,0,0,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0.194915761479505,0.288635524920988,0.350630706544707,0.453460767230423,0,0,0,0,0,0,0,0,36.1441179274923,55.6993536173684,38.956894913879,36.2610214745181,32.1988784292202,26.4387864086395,33.7511250115903,25.6683085837806,22.6571204492102,19.1571315348173,4.15149390336707,2.79317411380722,7.68301225893604,10.2104821168684,10.2710449687711,9.55986243940074,10.4455962066759,10.3017528619447,13.1576875932644,10.1078884705519,8.11133759648767,10.1858224348481,12.0797544636148,12.8690556333787,13.0378514529242,13.8125170472091,14.2537720912172,12.9249177710682,16.071350131329,10.745521169811,10.2860775715625,11.5359274003569,14.3061713968393,13.3718703301742,11.0107975085937,14.2152541258017,10.9756783723664,8.94437018888666,11.0001332215148,8.41713407486608,10.202611558679,11.3280154731898,9.00308294973317,15.0288735950387,9.06661071611365,23.7320049041049,14.5037597236153,10.3138105943183,2.67803664896381,0.882365676478062,2.55054619182464 | ||
|short_description=p2@Zfp238 | |short_description=p2@Zfp238 | ||
}} | }} |
Latest revision as of 21:23, 26 September 2015
Short description: | p2@Zfp238 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Zfp238_5end |
Coexpression cluster: | MCL_coexpression_mm9:923 |
Association with transcript: | 0bp_to_ENSMUST00000094276, NM_001012330, uc007dum.1, uc007dun.1_5end |
EntrezGene: | Zfp238 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.10e-16 | 33 |
neuronal stem cell | 6.10e-16 | 33 |
neuroblast | 6.10e-16 | 33 |
electrically signaling cell | 6.10e-16 | 33 |
electrically responsive cell | 6.92e-12 | 39 |
electrically active cell | 6.92e-12 | 39 |
CNS neuron (sensu Vertebrata) | 3.68e-10 | 23 |
neuroblast (sensu Vertebrata) | 3.68e-10 | 23 |
neural cell | 7.22e-10 | 43 |
ectodermal cell | 1.99e-09 | 44 |
neurectodermal cell | 1.99e-09 | 44 |
neuron of cerebral cortex | 2.09e-07 | 6 |
autonomic neuron | 6.17e-07 | 9 |