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FFCP PHASE1:Mm9::chr9:35366090..35366103,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=30959
|EntrezGene=30959
|HGNC=
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=Q9QY15
|UniProt=Q9QY15
|association_with_transcript=-35bp_to_ENSMUST00000034612,NM_013932,uc012gqi.1_5end
|association_with_transcript=-35bp_to_ENSMUST00000034612,NM_013932,uc012gqi.1_5end
|cluster_id=chr9:35366090..35366103,-
|description=CAGE_peak_4_at_Ddx25_5end
|description=CAGE_peak_4_at_Ddx25_5end
|id=chr9:35366090..35366103,-
|id=chr9:35366090..35366103,-
|ontology_enrichment_celltype=CL:0000117!1.73e-13!23;CL:0000337!1.73e-13!23;CL:0000540!4.31e-13!33;CL:0000047!4.31e-13!33;CL:0000031!4.31e-13!33;CL:0000404!4.31e-13!33;CL:0000393!1.48e-09!39;CL:0000211!1.48e-09!39;CL:0000221!5.04e-08!44;CL:0000133!5.04e-08!44;CL:0002319!6.79e-08!43
|ontology_enrichment_celltype=CL:0000117!1.73e-13!23;CL:0000337!1.73e-13!23;CL:0000540!4.31e-13!33;CL:0000047!4.31e-13!33;CL:0000031!4.31e-13!33;CL:0000404!4.31e-13!33;CL:0000393!1.48e-09!39;CL:0000211!1.48e-09!39;CL:0000221!5.04e-08!44;CL:0000133!5.04e-08!44;CL:0002319!6.79e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000117,1.23e-23,23;CL:0000337,1.23e-23,23;CL:0000540,1.34e-15,33;CL:0000047,1.34e-15,33;CL:0000031,1.34e-15,33;CL:0000404,1.34e-15,33;CL:0000393,3.98e-12,39;CL:0000211,3.98e-12,39;CL:0002319,2.26e-10,43;CL:0000221,5.48e-10,44;CL:0000133,5.48e-10,44;CL:0002609,6.41e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.21e-28!71;UBERON:0003075!2.21e-28!71;UBERON:0007284!2.21e-28!71;UBERON:0001017!2.56e-26!73;UBERON:0005743!2.56e-26!73;UBERON:0000073!2.28e-25!75;UBERON:0001016!2.28e-25!75;UBERON:0001049!3.40e-25!52;UBERON:0005068!3.40e-25!52;UBERON:0006241!3.40e-25!52;UBERON:0007135!3.40e-25!52;UBERON:0000033!2.39e-23!63;UBERON:0004121!3.48e-23!102;UBERON:0000924!3.48e-23!102;UBERON:0006601!3.48e-23!102;UBERON:0003056!2.26e-22!49;UBERON:0000955!2.95e-22!50;UBERON:0006238!2.95e-22!50;UBERON:0002616!1.66e-21!49;UBERON:0003080!3.32e-20!40;UBERON:0002780!1.86e-19!39;UBERON:0001890!1.86e-19!39;UBERON:0006240!1.86e-19!39;UBERON:0002020!3.85e-18!34;UBERON:0002791!7.31e-15!29;UBERON:0003528!7.31e-15!29;UBERON:0001893!7.31e-15!29;UBERON:0000153!1.72e-11!94;UBERON:0007811!3.84e-11!86;UBERON:0000956!6.26e-10!21;UBERON:0001869!6.26e-10!21;UBERON:0000203!6.26e-10!21;UBERON:0002619!9.53e-08!17;UBERON:0002021!4.56e-07!10;UBERON:0000411!4.56e-07!10;UBERON:0001950!4.56e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.08e-42,54;UBERON:0001049,6.13e-42,52;UBERON:0005068,6.13e-42,52;UBERON:0006241,6.13e-42,52;UBERON:0007135,6.13e-42,52;UBERON:0002346,2.93e-39,64;UBERON:0003075,2.93e-39,64;UBERON:0007284,2.93e-39,64;UBERON:0001017,7.06e-38,73;UBERON:0001016,1.88e-36,75;UBERON:0000955,1.11e-35,47;UBERON:0006238,1.11e-35,47;UBERON:0002616,2.35e-34,46;UBERON:0010371,1.41e-32,73;UBERON:0003080,1.10e-31,40;UBERON:0002020,4.45e-31,34;UBERON:0002780,2.28e-30,39;UBERON:0001890,2.28e-30,39;UBERON:0006240,2.28e-30,39;UBERON:0004121,2.43e-30,95;UBERON:0000924,2.43e-30,95;UBERON:0006601,2.43e-30,95;UBERON:0003056,6.15e-30,49;UBERON:0003528,3.49e-25,29;UBERON:0002791,3.49e-25,29;UBERON:0001893,3.49e-25,29;UBERON:0010314,6.68e-24,92;UBERON:0000956,2.42e-16,21;UBERON:0001869,2.42e-16,21;UBERON:0000203,2.42e-16,21;UBERON:0000025,2.68e-13,114;UBERON:0002619,1.90e-12,17;UBERON:0004111,1.44e-11,122;UBERON:0002420,4.13e-10,8;UBERON:0007245,4.13e-10,8;UBERON:0010009,4.13e-10,8;UBERON:0010011,4.13e-10,8;UBERON:0000454,4.13e-10,8;UBERON:0003076,4.33e-10,12;UBERON:0003057,4.33e-10,12;UBERON:0002021,7.27e-10,10;UBERON:0000411,7.27e-10,10;UBERON:0001950,7.27e-10,10;UBERON:0002240,2.55e-08,6;UBERON:0005174,2.55e-08,6;UBERON:0001137,2.55e-08,6;UBERON:0001948,4.89e-07,5;UBERON:0002315,4.89e-07,5
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06155844543851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0.257259436035947,0,0,2.22548106945558,2.64495489636016,3.1691570175309,0,0,0,0,0,0,0,2.48855069540346,2.02508907497536,1.89292465216244,2.57085885963423,2.20868540951614,2.9397791811589,1.43768206527355,2.75765635983006,0,4.59674417106676,3.37934373163736,3.16527090552465,2.92760459527711,2.08365348222704,2.79182999001381,5.6276261003168,3.97275444219706,6.48182888042069,2.13557521198654,5.21918448310842,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0.742210695324124,0.173485326766136,0.608930956624282,0.461230994512117,0.60289056221049,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0,0,0,1.46390398505774,3.77004072264219,0,0,0,0,3.89455662452539,1.83000241127451,2.76439574648302,3.99795936442236,2.04572365864264,2.49345653471472,4.2182728397617,0.611036183101898,0,0,0.420883711772948,1.69156575851515,1.14951052216736,1.26043490863744,1.05493372485001,0.476255494059295,0.384341160854549,0.468508622798644,0.517406741478031,0.431135985865684,0.756424320671277,0.527853372491847,0.43839146485515,0.834141747676794,0,0.205782136407943,1.99034266818493,0,0,0,1.24275463521301,0.234526059981096,0.540186184383045,0,0,0.462801338662135,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,1.89260953707715,3.49875682089567,0,0,1.2797295032114,0.464473343720877,0.257734922644187,0,0,0,0,0.164698954724011,0.502670417600539,0.198956472041151,0,0,0,0,0.189667900953082,0.228497025219458,0,0.814605311381257,0.193952487167626,0.140271639780637,0.126473074248515,0.147610147979602,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.947457058852424,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,4.65596710964597,3.16471553798949,0,0,0.315508219416257,0.390438744296638,1.07711698866399,0.238968797952552,0,0.849229592366497,0.404810701674894,0.292255857911312,0.395287777946524,3.85585579706168,0.141940085208269,0,0.488660878060728,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,2.7235168460303,0.540183282093931,1.16422815404479,0.857348140126369,1.59606210278046,1.24858172321449,1.64549020602121,1.522324745573,0,0,0,0,0,0.180938774784468,0,0,0,4.07935664423121,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,1.10717597753397,0.406638934253697,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0,0,0,0,13.5286305284206,0.149516546043979,0.827292452285488,0.972255941720238,0.774958940866387,0.844780627453891,0.469428954583016,0.651021924219751,1.78260885523708,4.59009829569411,6.91272015018877,0,0.202725215290164,0,0,0,0,0,0,0,0,0.201652370273681,0,0,0,0,1.55390167361845,0.717710852875806,0.839423081820392,0.19318959403219,0,0.183151624267265,0,0,4.51801474093653,2.76195141904306,2.86447756719698,3.09335728218638,3.42541259885321,3.7769694869485,0.675022500231806,1.35096360967266,2.71885445390523,3.62432218226274,1.14166082342594,1.19707462020309,1.53660245178721,0.729320151204882,1.25767897576789,0.551530525350042,0.222246727801615,0.824140228955577,0.320919209591815,0.505394423527595,0.760437899670719,1.50901073108861,0.37456602987953,0.448176066834085,0.574354689556133,0.952587382566147,0.463537303779422,1.54327376370964,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.564656282491984,0.846146078916765,0.73171189149109,0.789209134313529,0.543216455383447,0,0.355905054372522,0.29551344712669,0.409231043169689,1.23949472948773,0.385813221962283,1.99848462350357,0,0.214871054048298,0.382576664137687,0.220591419119515,0.231867835620421
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06155844543851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0.257259436035947,0,0,2.22548106945558,2.64495489636016,3.1691570175309,0,0,0,0,0,0,0,2.48855069540346,2.02508907497536,1.89292465216244,2.57085885963423,2.20868540951614,2.9397791811589,1.43768206527355,2.75765635983006,0,4.59674417106676,3.37934373163736,3.16527090552465,2.92760459527711,2.08365348222704,2.79182999001381,5.6276261003168,3.97275444219706,6.48182888042069,2.13557521198654,5.21918448310842,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0.742210695324124,0.173485326766136,0.608930956624282,0.461230994512117,0.60289056221049,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0,0,0,1.46390398505774,3.77004072264219,0,0,0,0,3.89455662452539,1.83000241127451,2.76439574648302,3.99795936442236,2.04572365864264,2.49345653471472,4.2182728397617,0.611036183101898,0,0,0.420883711772948,1.69156575851515,1.14951052216736,1.26043490863744,1.05493372485001,0.476255494059295,0.384341160854549,0.468508622798644,0.517406741478031,0.431135985865684,0.756424320671277,0.527853372491847,0.43839146485515,0.834141747676794,0,0.205782136407943,1.99034266818493,0,0,0,1.24275463521301,0.234526059981096,0.540186184383045,0,0,0.462801338662135,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,1.89260953707715,3.49875682089567,0,0,1.2797295032114,0.464473343720877,0.257734922644187,0,0,0,0,0.164698954724011,0.502670417600539,0.198956472041151,0,0,0,0,0.189667900953082,0.228497025219458,0,0.814605311381257,0.193952487167626,0.140271639780637,0.126473074248515,0.147610147979602,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.947457058852424,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,4.65596710964597,3.16471553798949,0,0,0.315508219416257,0.390438744296638,1.07711698866399,0.238968797952552,0,0.849229592366497,0.404810701674894,0.292255857911312,0.395287777946524,3.85585579706168,0.141940085208269,0,0.488660878060728,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,2.7235168460303,0.540183282093931,1.16422815404479,0.857348140126369,1.59606210278046,1.24858172321449,1.64549020602121,1.522324745573,0,0,0,0,0,0.180938774784468,0,0,0,4.07935664423121,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,1.10717597753397,0.406638934253697,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0,0,0,0,13.5286305284206,0.149516546043979,0.827292452285488,0.972255941720238,0.774958940866387,0.844780627453891,0.469428954583016,0.651021924219751,1.78260885523708,4.59009829569411,6.91272015018877,0,0.202725215290164,0,0,0,0,0,0,0,0,0.201652370273681,0,0,0,0,1.55390167361845,0.717710852875806,0.839423081820392,0.19318959403219,0,0.183151624267265,0,0,4.51801474093653,2.76195141904306,2.86447756719698,3.09335728218638,3.42541259885321,3.7769694869485,0.675022500231806,1.35096360967266,2.71885445390523,3.62432218226274,1.14166082342594,1.19707462020309,1.53660245178721,0.729320151204882,1.25767897576789,0.551530525350042,0.222246727801615,0.824140228955577,0.320919209591815,0.505394423527595,0.760437899670719,1.50901073108861,0.37456602987953,0.448176066834085,0.574354689556133,0.952587382566147,0.463537303779422,1.54327376370964,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.145346416632329,0.564656282491984,0.846146078916765,0.73171189149109,0.789209134313529,0.543216455383447,0,0.355905054372522,0.29551344712669,0.409231043169689,1.23949472948773,0.385813221962283,1.99848462350357,0,0.214871054048298,0.382576664137687,0.220591419119515,0.231867835620421
|short_description=p4@Ddx25
|short_description=p4@Ddx25
}}
}}

Latest revision as of 14:15, 26 September 2015

Short description:p4@Ddx25
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Ddx25_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: -35bp_to_ENSMUST00000034612, NM_013932, uc012gqi.1_5end
EntrezGene:Ddx25
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Ddx25

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.17
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.48
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.22
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.89
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D54.00
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F22.49
diencephalon, neonate N30.CNhs11201.1388-42B24.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G13.50
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.66
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.08
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G513.53
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D91.78
testis, neonate N20.CNhs11110.839-18H34.59
testis, neonate N30.CNhs11130.1391-42E26.91
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.08e-4254
neural tube6.13e-4252
neural rod6.13e-4252
future spinal cord6.13e-4252
neural keel6.13e-4252
neurectoderm2.93e-3964
neural plate2.93e-3964
presumptive neural plate2.93e-3964
central nervous system7.06e-3873
nervous system1.88e-3675
brain1.11e-3547
future brain1.11e-3547
regional part of brain2.35e-3446
ecto-epithelium1.41e-3273
anterior neural tube1.10e-3140
gray matter4.45e-3134
regional part of forebrain2.28e-3039
forebrain2.28e-3039
future forebrain2.28e-3039
ectoderm-derived structure2.43e-3095
ectoderm2.43e-3095
presumptive ectoderm2.43e-3095
pre-chordal neural plate6.15e-3049
brain grey matter3.49e-2529
regional part of telencephalon3.49e-2529
telencephalon3.49e-2529
structure with developmental contribution from neural crest6.68e-2492
cerebral cortex2.42e-1621
cerebral hemisphere2.42e-1621
pallium2.42e-1621
tube2.68e-13114
regional part of cerebral cortex1.90e-1217
anatomical conduit1.44e-11122
basal ganglion4.13e-108
nuclear complex of neuraxis4.13e-108
aggregate regional part of brain4.13e-108
collection of basal ganglia4.13e-108
cerebral subcortex4.13e-108
posterior neural tube4.33e-1012
chordal neural plate4.33e-1012
occipital lobe7.27e-1010
visual cortex7.27e-1010
neocortex7.27e-1010
spinal cord2.55e-086
dorsal region element2.55e-086
dorsum2.55e-086
regional part of spinal cord4.89e-075
gray matter of spinal cord4.89e-075
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