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FFCP PHASE1:Mm9::chr2:27532817..27532828,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20181
|EntrezGene=20181
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=P28700
|UniProt=P28700
|association_with_transcript=35bp_to_ENSMUST00000166775_5end
|association_with_transcript=35bp_to_ENSMUST00000166775_5end
|cluster_id=chr2:27532817..27532828,+
|description=CAGE_peak_6_at_Rxra_5end
|description=CAGE_peak_6_at_Rxra_5end
|id=chr2:27532817..27532828,+
|id=chr2:27532817..27532828,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002365!7.81e-08!25;UBERON:0002330!7.81e-08!25;UBERON:0004119!4.04e-07!130;UBERON:0000925!4.04e-07!130;UBERON:0006595!4.04e-07!130;UBERON:0002107!4.44e-07!22;UBERON:0007499!4.44e-07!22;UBERON:0006925!4.44e-07!22;UBERON:0009497!4.44e-07!22;UBERON:0000015!4.44e-07!22;UBERON:0002423!4.44e-07!22;UBERON:0006235!4.44e-07!22;UBERON:0008835!4.44e-07!22;UBERON:0003894!4.44e-07!22;UBERON:0004161!4.44e-07!22;UBERON:0008836!4.44e-07!22;UBERON:0001007!7.56e-07!128;UBERON:0001555!7.56e-07!128;UBERON:0007026!7.56e-07!128;UBERON:0004921!9.61e-07!126;UBERON:0004185!9.61e-07!126
|ontology_enrichment_uberon=UBERON:0002365!7.81e-08!25;UBERON:0002330!7.81e-08!25;UBERON:0004119!4.04e-07!130;UBERON:0000925!4.04e-07!130;UBERON:0006595!4.04e-07!130;UBERON:0002107!4.44e-07!22;UBERON:0007499!4.44e-07!22;UBERON:0006925!4.44e-07!22;UBERON:0009497!4.44e-07!22;UBERON:0000015!4.44e-07!22;UBERON:0002423!4.44e-07!22;UBERON:0006235!4.44e-07!22;UBERON:0008835!4.44e-07!22;UBERON:0003894!4.44e-07!22;UBERON:0004161!4.44e-07!22;UBERON:0008836!4.44e-07!22;UBERON:0001007!7.56e-07!128;UBERON:0001555!7.56e-07!128;UBERON:0007026!7.56e-07!128;UBERON:0004921!9.61e-07!126;UBERON:0004185!9.61e-07!126
|ontology_enrichment_uberon_v019_2=UBERON:0002365,4.35e-10,25;UBERON:0002330,4.35e-10,25;UBERON:0002107,2.59e-09,22;UBERON:0007499,2.59e-09,22;UBERON:0006925,2.59e-09,22;UBERON:0009497,2.59e-09,22;UBERON:0000015,2.59e-09,22;UBERON:0002423,2.59e-09,22;UBERON:0006235,2.59e-09,22;UBERON:0008835,2.59e-09,22;UBERON:0003894,2.59e-09,22;UBERON:0004161,2.59e-09,22;UBERON:0008836,2.59e-09,22;UBERON:0009854,1.07e-08,23;UBERON:0009856,1.07e-08,23;UBERON:0004921,6.73e-08,114;UBERON:0004119,1.15e-07,118;UBERON:0000925,1.15e-07,118;UBERON:0006595,1.15e-07,118;UBERON:0001007,1.52e-07,116;UBERON:0001555,1.52e-07,116;UBERON:0007026,1.52e-07,116
|phase1_expression=0.640595388419176,2.79180326111489,0.454999239389536,3.32710632437513,2.00358291978539,0.33575854382378,0.233612640595526,0.129123323441576,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.595303031057488,0,0,0.639969691173627,0.68822784320151,1.14846392823004,1.7230479846363,1.72376986148711,1.14014051673824,1.26015064879965,0,0,0,0,0.577703239502549,0.997407872150954,0.816677425049476,0,0.7813353445238,0,0,0,0.971020706062307,1.00717454380462,0.506884656097573,1.10128051297009,2.34717403304412,0.872100625521786,0,0.194429899074283,0,0,0,0,0,1.80081605225163,0.573066879877513,0.515672092277442,0.202316460859598,0.528990979272033,0.633831403506179,1.0165335962074,0.889294796111139,0.449949858640699,0,2.8419204597844,0.898800331555214,0,0.414758449233911,0.135005938331691,0.210324961351382,0.285650984403804,0.441737081903227,0.367472397644862,0.0958454710182364,0,1.10115880999389,0.127687338085188,0,0.131886287730194,0.0914876436024097,0.52091337055676,0.279182999001381,0,0.45839474333043,0,0.142371680799103,0.186399445825301,0.454357159999104,0.906858721281426,0.869593466105033,1.72084775396277,3.39985666853875,2.69851595818909,7.14754059192436,3.13618820968135,1.54488862144927,1.02258193546835,0.259786004602869,1.06001872353102,0.704217098883403,1.28326477414318,5.09610479413291,0,0.216491041011214,0.253359865475099,1.01104889002957,4.22480354960522,0,0.742210695324124,0.520455980298408,0.304465478312141,1.15307748628029,0.301445281105245,0.352766121407114,0.753999547978053,0.988779870937496,3.03658649531814,0,0.161766849947409,1.10420759230197,0.484875253135222,0,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0.20778804455956,0.324482526135515,0.81471491080253,0.497627882440372,0.252722758433675,2.52530227063769,0.260240885925407,0.229902104433473,0.540186389416048,0.60281927134286,0.612328492361951,0.384341160854549,0.655912071918102,0.517406741478031,0.215567992932842,0.378212160335639,0.527853372491847,0.876782929710299,0.278047249225598,0.696504333044333,1.02891068203972,0.398068533636986,0,0,0,0.414251545071004,0.938104239924385,0.180062061461015,0,0.393528463494808,0.617068451549513,0,0.804820204198858,0.583826711835847,0.16455984991348,0.164167464079095,0.486412857275134,0.877199924551994,0.878200461164203,0.671032093801859,0,0.102904612379284,3.63460661282178,1.58670339998127,0.213288250535234,0.464473343720877,0.644337306610467,0.605050573870028,0.889512175379481,0.760902504450237,0.474529061544512,1.81168850196412,1.25667604400135,0.795825888164603,2.14460495831032,1.79763881730844,1.94524244887225,2.58883655230677,0.189667900953082,0.342745537829186,0,0.407302655690628,0.193952487167626,0.911765658574141,0.758838445491087,0.590440591918409,0.627994911365499,0.987177311374404,5.33614728756868,0.333690211432188,0.786235980452812,0,0.811440485554012,0,1.01850340712568,2.01387296215567,3.89124544260085,0.823684239564244,7.18841032636773,2.60498663367952,1.87222603868736,3.53610429125956,3.22915344339442,6.27176577772377,0.923765950833023,0.757965647081939,0.488894929326078,0.848725428875941,0.704070744865506,0.837531287209079,1.19021820443007,1.17080188714679,1.7339865851681,0.8858587585951,1.91345722388985,1.14704320301017,1.72684981865896,2.16973587872267,0,0.54390568381871,1.47529281905711,2.20749397043786,0.160550589987792,0.468846746368813,1.63934945376675,3.02965112645248,0.631016438832513,0.780877488593277,0.861693590931196,0.955875191810208,0,1.41538265394416,0.404810701674894,0,1.97643888973262,0,0.425820255624806,0.890328018336276,0.81443479676788,0.989820737835213,0,0.242780636154981,0.302323556964751,0.188605079755898,0.885905678642318,0.614870295887855,0.516856586336442,1.81766864738753,0.356497378384721,0.316036757935816,2.10837217149998,4.12542172992747,0.340439605753788,0,0.258717367565509,0.214337035031592,0.709360934569094,0.713475270408282,0.822745103010605,1.2178597964584,0.704015124191131,1.0591603543191,0,1.15420377059036,2.42196640043858,1.56813604813205,2.14870219205646,3.77524069413641,0.874442509889552,1.48340241608408,0.170870880797853,1.03193433981611,0.185194527369712,0.376736914009382,0.27338845544205,0.228778173206523,0,0,0.138199973804424,1.90934123603023,1.10717597753397,0.813277868507395,0.972048067396211,0.418176592028937,0.87345025498471,0.809186078308924,1.57041565878138,1.30877970992015,1.68499465279331,0.621339313086926,0,0.598066184175915,0.330916980914195,0.388902376688095,0.258319646955462,0.168956125490778,0.469428954583016,0.13020438484395,0.838874755405687,0.241584120826006,0.864090018773596,0,0.608175645870493,0.410843828659309,0,0,0,0.240390899039938,0.147689527174577,0.100966449948148,0.228620419965,0.302478555410522,0.0974578807397524,0,0,1.13365191807606,0.443971906748129,0.179427713218951,0.503653849092235,1.35232715822533,0.93841237725591,1.46521299413812,2.35805216986972,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0.62272408550506,0.399024873401031,0.853668028770671,0.486213434136588,1.04806581313991,0,0.666740183404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|phase1_expression=0.640595388419176,2.79180326111489,0.454999239389536,3.32710632437513,2.00358291978539,0.33575854382378,0.233612640595526,0.129123323441576,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.595303031057488,0,0,0.639969691173627,0.68822784320151,1.14846392823004,1.7230479846363,1.72376986148711,1.14014051673824,1.26015064879965,0,0,0,0,0.577703239502549,0.997407872150954,0.816677425049476,0,0.7813353445238,0,0,0,0.971020706062307,1.00717454380462,0.506884656097573,1.10128051297009,2.34717403304412,0.872100625521786,0,0.194429899074283,0,0,0,0,0,1.80081605225163,0.573066879877513,0.515672092277442,0.202316460859598,0.528990979272033,0.633831403506179,1.0165335962074,0.889294796111139,0.449949858640699,0,2.8419204597844,0.898800331555214,0,0.414758449233911,0.135005938331691,0.210324961351382,0.285650984403804,0.441737081903227,0.367472397644862,0.0958454710182364,0,1.10115880999389,0.127687338085188,0,0.131886287730194,0.0914876436024097,0.52091337055676,0.279182999001381,0,0.45839474333043,0,0.142371680799103,0.186399445825301,0.454357159999104,0.906858721281426,0.869593466105033,1.72084775396277,3.39985666853875,2.69851595818909,7.14754059192436,3.13618820968135,1.54488862144927,1.02258193546835,0.259786004602869,1.06001872353102,0.704217098883403,1.28326477414318,5.09610479413291,0,0.216491041011214,0.253359865475099,1.01104889002957,4.22480354960522,0,0.742210695324124,0.520455980298408,0.304465478312141,1.15307748628029,0.301445281105245,0.352766121407114,0.753999547978053,0.988779870937496,3.03658649531814,0,0.161766849947409,1.10420759230197,0.484875253135222,0,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0.20778804455956,0.324482526135515,0.81471491080253,0.497627882440372,0.252722758433675,2.52530227063769,0.260240885925407,0.229902104433473,0.540186389416048,0.60281927134286,0.612328492361951,0.384341160854549,0.655912071918102,0.517406741478031,0.215567992932842,0.378212160335639,0.527853372491847,0.876782929710299,0.278047249225598,0.696504333044333,1.02891068203972,0.398068533636986,0,0,0,0.414251545071004,0.938104239924385,0.180062061461015,0,0.393528463494808,0.617068451549513,0,0.804820204198858,0.583826711835847,0.16455984991348,0.164167464079095,0.486412857275134,0.877199924551994,0.878200461164203,0.671032093801859,0,0.102904612379284,3.63460661282178,1.58670339998127,0.213288250535234,0.464473343720877,0.644337306610467,0.605050573870028,0.889512175379481,0.760902504450237,0.474529061544512,1.81168850196412,1.25667604400135,0.795825888164603,2.14460495831032,1.79763881730844,1.94524244887225,2.58883655230677,0.189667900953082,0.342745537829186,0,0.407302655690628,0.193952487167626,0.911765658574141,0.758838445491087,0.590440591918409,0.627994911365499,0.987177311374404,5.33614728756868,0.333690211432188,0.786235980452812,0,0.811440485554012,0,1.01850340712568,2.01387296215567,3.89124544260085,0.823684239564244,7.18841032636773,2.60498663367952,1.87222603868736,3.53610429125956,3.22915344339442,6.27176577772377,0.923765950833023,0.757965647081939,0.488894929326078,0.848725428875941,0.704070744865506,0.837531287209079,1.19021820443007,1.17080188714679,1.7339865851681,0.8858587585951,1.91345722388985,1.14704320301017,1.72684981865896,2.16973587872267,0,0.54390568381871,1.47529281905711,2.20749397043786,0.160550589987792,0.468846746368813,1.63934945376675,3.02965112645248,0.631016438832513,0.780877488593277,0.861693590931196,0.955875191810208,0,1.41538265394416,0.404810701674894,0,1.97643888973262,0,0.425820255624806,0.890328018336276,0.81443479676788,0.989820737835213,0,0.242780636154981,0.302323556964751,0.188605079755898,0.885905678642318,0.614870295887855,0.516856586336442,1.81766864738753,0.356497378384721,0.316036757935816,2.10837217149998,4.12542172992747,0.340439605753788,0,0.258717367565509,0.214337035031592,0.709360934569094,0.713475270408282,0.822745103010605,1.2178597964584,0.704015124191131,1.0591603543191,0,1.15420377059036,2.42196640043858,1.56813604813205,2.14870219205646,3.77524069413641,0.874442509889552,1.48340241608408,0.170870880797853,1.03193433981611,0.185194527369712,0.376736914009382,0.27338845544205,0.228778173206523,0,0,0.138199973804424,1.90934123603023,1.10717597753397,0.813277868507395,0.972048067396211,0.418176592028937,0.87345025498471,0.809186078308924,1.57041565878138,1.30877970992015,1.68499465279331,0.621339313086926,0,0.598066184175915,0.330916980914195,0.388902376688095,0.258319646955462,0.168956125490778,0.469428954583016,0.13020438484395,0.838874755405687,0.241584120826006,0.864090018773596,0,0.608175645870493,0.410843828659309,0,0,0,0.240390899039938,0.147689527174577,0.100966449948148,0.228620419965,0.302478555410522,0.0974578807397524,0,0,1.13365191807606,0.443971906748129,0.179427713218951,0.503653849092235,1.35232715822533,0.93841237725591,1.46521299413812,2.35805216986972,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0.62272408550506,0.399024873401031,0.853668028770671,0.486213434136588,1.04806581313991,0,0.666740183404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|short_description=p6@Rxra
|short_description=p6@Rxra
}}
}}

Latest revision as of 11:43, 26 September 2015

Short description:p6@Rxra
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Rxra_5end
Coexpression cluster:NA
Association with transcript: 35bp_to_ENSMUST00000166775_5end
EntrezGene:Rxra
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Rxra

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.15
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.22
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H13.04
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.81
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.95
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D50.76
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B25.34
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F43.89
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A33.54
liver, neonate N25.CNhs11198.1368-26H13.23
liver, neonate N30.CNhs11106.1382-42D16.27
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E61.91
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H22.17
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.64
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G42.42
skin, neonate N03.CNhs11215.662-22H31.57
skin, neonate N06.CNhs11097.693-20I52.15
skin, neonate N10.CNhs11108.762-6C43.78
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A91.57
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I11.68
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D52.36
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
exocrine gland4.35e-1025
exocrine system4.35e-1025
liver2.59e-0922
epithelial sac2.59e-0922
digestive gland2.59e-0922
epithelium of foregut-midgut junction2.59e-0922
anatomical boundary2.59e-0922
hepatobiliary system2.59e-0922
foregut-midgut junction2.59e-0922
hepatic diverticulum2.59e-0922
liver primordium2.59e-0922
septum transversum2.59e-0922
liver bud2.59e-0922
digestive tract diverticulum1.07e-0823
sac1.07e-0823
subdivision of digestive tract6.73e-08114
endoderm-derived structure1.15e-07118
endoderm1.15e-07118
presumptive endoderm1.15e-07118
digestive system1.52e-07116
digestive tract1.52e-07116
primitive gut1.52e-07116
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