FFCP PHASE1:Mm9::chr2:79879041..79879078,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18573 | |EntrezGene=18573 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=107bp_to_ENSMUST00000146076_5end | |association_with_transcript=107bp_to_ENSMUST00000146076_5end | ||
|cluster_id=chr2:79879041..79879078,- | |||
|description=CAGE_peak_1_at_Pde1a_5end | |description=CAGE_peak_1_at_Pde1a_5end | ||
|id=chr2:79879041..79879078,- | |id=chr2:79879041..79879078,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!6.70e-12!23;UBERON:0001009!6.70e-12!23;UBERON:0003103!2.03e-10!43;UBERON:0004872!5.08e-10!33;UBERON:0007100!6.22e-10!18;UBERON:0000948!6.22e-10!18;UBERON:0005498!6.22e-10!18;UBERON:0004140!6.22e-10!18;UBERON:0009881!6.22e-10!18;UBERON:0004141!6.22e-10!18;UBERON:0003084!6.22e-10!18;UBERON:0007005!6.22e-10!18;UBERON:0004139!6.22e-10!18;UBERON:0004291!6.22e-10!18;UBERON:0003914!1.02e-09!47;UBERON:0000926!6.84e-09!193;UBERON:0004120!6.84e-09!193;UBERON:0006603!6.84e-09!193;UBERON:0000468!1.26e-08!333;UBERON:0001008!3.45e-07!17;UBERON:0006554!3.53e-07!16;UBERON:0002113!4.27e-07!14;UBERON:0003918!4.27e-07!14;UBERON:0005095!4.27e-07!14;UBERON:0007687!4.27e-07!14;UBERON:0005156!4.33e-07!26;UBERON:0000990!4.33e-07!26;UBERON:0000479!7.22e-07!349;UBERON:0003133!8.58e-07!24 | |ontology_enrichment_uberon=UBERON:0004535!6.70e-12!23;UBERON:0001009!6.70e-12!23;UBERON:0003103!2.03e-10!43;UBERON:0004872!5.08e-10!33;UBERON:0007100!6.22e-10!18;UBERON:0000948!6.22e-10!18;UBERON:0005498!6.22e-10!18;UBERON:0004140!6.22e-10!18;UBERON:0009881!6.22e-10!18;UBERON:0004141!6.22e-10!18;UBERON:0003084!6.22e-10!18;UBERON:0007005!6.22e-10!18;UBERON:0004139!6.22e-10!18;UBERON:0004291!6.22e-10!18;UBERON:0003914!1.02e-09!47;UBERON:0000926!6.84e-09!193;UBERON:0004120!6.84e-09!193;UBERON:0006603!6.84e-09!193;UBERON:0000468!1.26e-08!333;UBERON:0001008!3.45e-07!17;UBERON:0006554!3.53e-07!16;UBERON:0002113!4.27e-07!14;UBERON:0003918!4.27e-07!14;UBERON:0005095!4.27e-07!14;UBERON:0007687!4.27e-07!14;UBERON:0005156!4.33e-07!26;UBERON:0000990!4.33e-07!26;UBERON:0000479!7.22e-07!349;UBERON:0003133!8.58e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,4.13e-12,23;UBERON:0001009,4.13e-12,23;UBERON:0003103,1.15e-10,43;UBERON:0007100,4.20e-10,18;UBERON:0000948,4.20e-10,18;UBERON:0005498,4.20e-10,18;UBERON:0004140,4.20e-10,18;UBERON:0009881,4.20e-10,18;UBERON:0004141,4.20e-10,18;UBERON:0003084,4.20e-10,18;UBERON:0007005,4.20e-10,18;UBERON:0004139,4.20e-10,18;UBERON:0004291,4.20e-10,18;UBERON:0003914,7.88e-10,47;UBERON:0004872,1.03e-09,33;UBERON:0002113,3.29e-07,14;UBERON:0003918,3.29e-07,14;UBERON:0011143,3.29e-07,14;UBERON:0005095,3.29e-07,14;UBERON:0007687,3.29e-07,14;UBERON:0005156,4.66e-07,26;UBERON:0000990,4.66e-07,26;UBERON:0003133,9.40e-07,24 | |||
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| ||
|short_description=p1@Pde1a | |short_description=p1@Pde1a | ||
}} | }} |
Latest revision as of 01:02, 27 September 2015
Short description: | p1@Pde1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pde1a_5end |
Coexpression cluster: | NA |
Association with transcript: | 107bp_to_ENSMUST00000146076_5end |
EntrezGene: | Pde1a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 4.13e-12 | 23 |
circulatory system | 4.13e-12 | 23 |
compound organ | 1.15e-10 | 43 |
primary circulatory organ | 4.20e-10 | 18 |
heart | 4.20e-10 | 18 |
primitive heart tube | 4.20e-10 | 18 |
primary heart field | 4.20e-10 | 18 |
anterior lateral plate mesoderm | 4.20e-10 | 18 |
heart tube | 4.20e-10 | 18 |
heart primordium | 4.20e-10 | 18 |
cardiac mesoderm | 4.20e-10 | 18 |
cardiogenic plate | 4.20e-10 | 18 |
heart rudiment | 4.20e-10 | 18 |
epithelial tube | 7.88e-10 | 47 |
splanchnic layer of lateral plate mesoderm | 1.03e-09 | 33 |
kidney | 3.29e-07 | 14 |
kidney mesenchyme | 3.29e-07 | 14 |
upper urinary tract | 3.29e-07 | 14 |
kidney rudiment | 3.29e-07 | 14 |
kidney field | 3.29e-07 | 14 |
reproductive structure | 4.66e-07 | 26 |
reproductive system | 4.66e-07 | 26 |
reproductive organ | 9.40e-07 | 24 |