FFCP PHASE1:Mm9::chr3:133454457..133454466,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=196 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:133454457..133454466,- | |||
|description=CAGE_peak_at_chr3:133454457..133454466,- | |description=CAGE_peak_at_chr3:133454457..133454466,- | ||
|id=chr3:133454457..133454466,- | |id=chr3:133454457..133454466,- | ||
|ontology_enrichment_celltype=CL:0000181!3.81e-13!5;CL:0000417!3.81e-13!5;CL:0000668!3.81e-13!5;CL:0000412!3.81e-13!5;CL:0000182!3.81e-13!5;CL:0000057!2.98e-08!1;CL:0000632!2.98e-08!1 | |ontology_enrichment_celltype=CL:0000181!3.81e-13!5;CL:0000417!3.81e-13!5;CL:0000668!3.81e-13!5;CL:0000412!3.81e-13!5;CL:0000182!3.81e-13!5;CL:0000057!2.98e-08!1;CL:0000632!2.98e-08!1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.33e-15,1;CL:0000632,1.33e-15,1;CL:0000182,1.08e-12,5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.50e-19!22;UBERON:0007499!1.50e-19!22;UBERON:0006925!1.50e-19!22;UBERON:0009497!1.50e-19!22;UBERON:0000015!1.50e-19!22;UBERON:0002423!1.50e-19!22;UBERON:0006235!1.50e-19!22;UBERON:0008835!1.50e-19!22;UBERON:0003894!1.50e-19!22;UBERON:0004161!1.50e-19!22;UBERON:0008836!1.50e-19!22;UBERON:0009854!1.13e-18!23;UBERON:0009856!1.13e-18!23;UBERON:0002365!3.94e-17!25;UBERON:0002330!3.94e-17!25;UBERON:0005172!7.52e-16!49;UBERON:0005173!7.52e-16!49;UBERON:0002417!7.52e-16!49;UBERON:0000916!7.52e-16!49;UBERON:0009569!1.73e-11!66;UBERON:0003914!8.78e-09!47;UBERON:0005256!8.78e-09!47;UBERON:0005177!1.17e-08!85;UBERON:0005057!4.93e-08!51;UBERON:0003929!2.16e-07!55;UBERON:0002100!2.40e-07!98 | |ontology_enrichment_uberon=UBERON:0002107!1.50e-19!22;UBERON:0007499!1.50e-19!22;UBERON:0006925!1.50e-19!22;UBERON:0009497!1.50e-19!22;UBERON:0000015!1.50e-19!22;UBERON:0002423!1.50e-19!22;UBERON:0006235!1.50e-19!22;UBERON:0008835!1.50e-19!22;UBERON:0003894!1.50e-19!22;UBERON:0004161!1.50e-19!22;UBERON:0008836!1.50e-19!22;UBERON:0009854!1.13e-18!23;UBERON:0009856!1.13e-18!23;UBERON:0002365!3.94e-17!25;UBERON:0002330!3.94e-17!25;UBERON:0005172!7.52e-16!49;UBERON:0005173!7.52e-16!49;UBERON:0002417!7.52e-16!49;UBERON:0000916!7.52e-16!49;UBERON:0009569!1.73e-11!66;UBERON:0003914!8.78e-09!47;UBERON:0005256!8.78e-09!47;UBERON:0005177!1.17e-08!85;UBERON:0005057!4.93e-08!51;UBERON:0003929!2.16e-07!55;UBERON:0002100!2.40e-07!98 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.96e-24,22;UBERON:0007499,3.96e-24,22;UBERON:0006925,3.96e-24,22;UBERON:0009497,3.96e-24,22;UBERON:0000015,3.96e-24,22;UBERON:0002423,3.96e-24,22;UBERON:0006235,3.96e-24,22;UBERON:0008835,3.96e-24,22;UBERON:0003894,3.96e-24,22;UBERON:0004161,3.96e-24,22;UBERON:0008836,3.96e-24,22;UBERON:0009854,4.18e-23,23;UBERON:0009856,4.18e-23,23;UBERON:0002365,2.66e-21,25;UBERON:0002330,2.66e-21,25;UBERON:0005256,4.78e-12,45;UBERON:0003914,1.50e-11,47;UBERON:0005172,4.27e-11,49;UBERON:0005173,4.27e-11,49;UBERON:0002417,4.27e-11,49;UBERON:0000916,4.27e-11,49;UBERON:0003929,6.31e-10,55;UBERON:0002368,3.96e-09,60;UBERON:0003104,5.52e-09,61;UBERON:0009142,5.52e-09,61;UBERON:0002530,1.88e-08,65;UBERON:0000490,2.50e-08,66;UBERON:0009569,2.50e-08,66;UBERON:0005911,5.59e-08,69;UBERON:0000949,1.17e-07,72;UBERON:0005177,5.28e-07,79;UBERON:0001041,6.41e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,2.03991400112325,0.539703191637817,4.54843492213368,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0.295220295959204,0,0.987177311374404,5.63259991465583,0,0,0,0,0,0,0,0,0,0,0,0,0.505157755894224,2.51156378930677,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,2.03991400112325,0.539703191637817,4.54843492213368,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0.295220295959204,0,0.987177311374404,5.63259991465583,0,0,0,0,0,0,0,0,0,0,0,0,0.505157755894224,2.51156378930677,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:133454457..133454466,- | |short_description=p@chr3:133454457..133454466,- | ||
}} | }} |
Latest revision as of 01:46, 6 August 2015
Short description: | p@chr3:133454457..133454466, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:133454457..133454466, - |
Coexpression cluster: | MCL_coexpression_mm9:196 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.33e-15 | 1 |
hepatic stellate cell | 1.33e-15 | 1 |
hepatocyte | 1.08e-12 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 3.96e-24 | 22 |
epithelial sac | 3.96e-24 | 22 |
digestive gland | 3.96e-24 | 22 |
epithelium of foregut-midgut junction | 3.96e-24 | 22 |
anatomical boundary | 3.96e-24 | 22 |
hepatobiliary system | 3.96e-24 | 22 |
foregut-midgut junction | 3.96e-24 | 22 |
hepatic diverticulum | 3.96e-24 | 22 |
liver primordium | 3.96e-24 | 22 |
septum transversum | 3.96e-24 | 22 |
liver bud | 3.96e-24 | 22 |
digestive tract diverticulum | 4.18e-23 | 23 |
sac | 4.18e-23 | 23 |
exocrine gland | 2.66e-21 | 25 |
exocrine system | 2.66e-21 | 25 |
trunk mesenchyme | 4.78e-12 | 45 |
epithelial tube | 1.50e-11 | 47 |
abdomen element | 4.27e-11 | 49 |
abdominal segment element | 4.27e-11 | 49 |
abdominal segment of trunk | 4.27e-11 | 49 |
abdomen | 4.27e-11 | 49 |
gut epithelium | 6.31e-10 | 55 |
endocrine gland | 3.96e-09 | 60 |
mesenchyme | 5.52e-09 | 61 |
entire embryonic mesenchyme | 5.52e-09 | 61 |
gland | 1.88e-08 | 65 |
unilaminar epithelium | 2.50e-08 | 66 |
subdivision of trunk | 2.50e-08 | 66 |
endo-epithelium | 5.59e-08 | 69 |
endocrine system | 1.17e-07 | 72 |
trunk region element | 5.28e-07 | 79 |
foregut | 6.41e-07 | 80 |