FFCP PHASE1:Mm9::chr3:137215621..137215629,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=229862 | |EntrezGene=229862 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=9 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C5A4 | |UniProt=Q8C5A4 | ||
|association_with_transcript=-35bp_to_ENSMUST00000068546,NM_177665,uc008rmm.1_5end | |association_with_transcript=-35bp_to_ENSMUST00000068546,NM_177665,uc008rmm.1_5end | ||
|cluster_id=chr3:137215621..137215629,- | |||
|description=CAGE_peak_3_at_Gm4861_5end | |description=CAGE_peak_3_at_Gm4861_5end | ||
|id=chr3:137215621..137215629,- | |id=chr3:137215621..137215629,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!3.28e-58!3;UBERON:0006555!3.28e-58!3;UBERON:0005103!3.28e-58!3;UBERON:0000083!3.28e-58!3;UBERON:0009201!3.28e-58!3;UBERON:0004819!3.28e-58!3;UBERON:0006553!3.28e-58!3;UBERON:0003074!3.28e-58!3;UBERON:0003060!3.28e-58!3;UBERON:0000080!4.54e-44!4;UBERON:0005904!4.54e-44!4;UBERON:0006947!4.54e-44!4;UBERON:0002120!4.54e-44!4;UBERON:0004054!4.54e-44!4;UBERON:0004875!4.54e-44!4;UBERON:0004876!4.54e-44!4;UBERON:0005721!4.54e-44!4;UBERON:0005754!4.54e-44!4;UBERON:0007297!4.54e-44!4;UBERON:0000058!6.66e-30!6;UBERON:0001343!9.50e-23!2;UBERON:0004910!9.50e-23!2;UBERON:0004909!9.50e-23!2;UBERON:0005154!9.50e-23!2;UBERON:0005295!9.50e-23!2;UBERON:0005297!9.50e-23!2;UBERON:0005294!9.50e-23!2;UBERON:0010141!9.50e-23!2;UBERON:0005891!9.50e-23!2;UBERON:0004175!1.98e-20!9;UBERON:0003887!1.57e-18!10;UBERON:0004871!1.12e-15!3;UBERON:0002113!1.25e-13!14;UBERON:0003918!1.25e-13!14;UBERON:0003064!1.25e-13!14;UBERON:0005095!1.25e-13!14;UBERON:0007687!1.25e-13!14;UBERON:0003135!8.25e-13!15;UBERON:0006554!4.31e-12!16;UBERON:0003101!4.31e-12!16;UBERON:0000079!4.31e-12!16;UBERON:0001008!1.86e-11!17;UBERON:0004122!5.59e-10!5;UBERON:0000489!1.61e-09!21;UBERON:0003133!1.75e-08!24;UBERON:0005156!6.33e-08!26;UBERON:0000990!6.33e-08!26 | |ontology_enrichment_uberon=UBERON:0001301!3.28e-58!3;UBERON:0006555!3.28e-58!3;UBERON:0005103!3.28e-58!3;UBERON:0000083!3.28e-58!3;UBERON:0009201!3.28e-58!3;UBERON:0004819!3.28e-58!3;UBERON:0006553!3.28e-58!3;UBERON:0003074!3.28e-58!3;UBERON:0003060!3.28e-58!3;UBERON:0000080!4.54e-44!4;UBERON:0005904!4.54e-44!4;UBERON:0006947!4.54e-44!4;UBERON:0002120!4.54e-44!4;UBERON:0004054!4.54e-44!4;UBERON:0004875!4.54e-44!4;UBERON:0004876!4.54e-44!4;UBERON:0005721!4.54e-44!4;UBERON:0005754!4.54e-44!4;UBERON:0007297!4.54e-44!4;UBERON:0000058!6.66e-30!6;UBERON:0001343!9.50e-23!2;UBERON:0004910!9.50e-23!2;UBERON:0004909!9.50e-23!2;UBERON:0005154!9.50e-23!2;UBERON:0005295!9.50e-23!2;UBERON:0005297!9.50e-23!2;UBERON:0005294!9.50e-23!2;UBERON:0010141!9.50e-23!2;UBERON:0005891!9.50e-23!2;UBERON:0004175!1.98e-20!9;UBERON:0003887!1.57e-18!10;UBERON:0004871!1.12e-15!3;UBERON:0002113!1.25e-13!14;UBERON:0003918!1.25e-13!14;UBERON:0003064!1.25e-13!14;UBERON:0005095!1.25e-13!14;UBERON:0007687!1.25e-13!14;UBERON:0003135!8.25e-13!15;UBERON:0006554!4.31e-12!16;UBERON:0003101!4.31e-12!16;UBERON:0000079!4.31e-12!16;UBERON:0001008!1.86e-11!17;UBERON:0004122!5.59e-10!5;UBERON:0000489!1.61e-09!21;UBERON:0003133!1.75e-08!24;UBERON:0005156!6.33e-08!26;UBERON:0000990!6.33e-08!26 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,5.61e-30,3;UBERON:0006555,5.61e-30,3;UBERON:0005103,5.61e-30,3;UBERON:0000083,5.61e-30,3;UBERON:0009201,5.61e-30,3;UBERON:0004819,5.61e-30,3;UBERON:0006553,5.61e-30,3;UBERON:0003074,5.61e-30,3;UBERON:0003060,5.61e-30,3;UBERON:0000080,6.52e-23,4;UBERON:0005904,6.52e-23,4;UBERON:0006947,6.52e-23,4;UBERON:0002120,6.52e-23,4;UBERON:0004054,6.52e-23,4;UBERON:0004875,6.52e-23,4;UBERON:0004876,6.52e-23,4;UBERON:0005721,6.52e-23,4;UBERON:0005754,6.52e-23,4;UBERON:0007297,6.52e-23,4;UBERON:0000058,8.67e-14,7;UBERON:0004175,4.56e-11,9;UBERON:0003887,4.12e-10,10;UBERON:0002113,1.22e-07,14;UBERON:0003918,1.22e-07,14;UBERON:0011143,1.22e-07,14;UBERON:0003064,1.22e-07,14;UBERON:0005095,1.22e-07,14;UBERON:0007687,1.22e-07,14;UBERON:0003135,3.18e-07,15;UBERON:0003101,7.35e-07,16;UBERON:0000079,7.35e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,4.54900965180614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,4.54900965180614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@Gm4861 | |short_description=p3@Gm4861 | ||
}} | }} |
Latest revision as of 16:24, 1 October 2015
Short description: | p3@Gm4861 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gm4861_5end |
Coexpression cluster: | MCL_coexpression_mm9:9 |
Association with transcript: | -35bp_to_ENSMUST00000068546, NM_177665, uc008rmm.1_5end |
EntrezGene: | Gm4861 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 5.61e-30 | 3 |
excretory tube | 5.61e-30 | 3 |
mesonephric epithelium | 5.61e-30 | 3 |
mesonephric tubule | 5.61e-30 | 3 |
nephric duct | 5.61e-30 | 3 |
kidney epithelium | 5.61e-30 | 3 |
renal duct | 5.61e-30 | 3 |
mesonephric duct | 5.61e-30 | 3 |
pronephric duct | 5.61e-30 | 3 |
mesonephros | 6.52e-23 | 4 |
duct of male reproductive system | 6.52e-23 | 4 |
male genital duct | 6.52e-23 | 4 |
pronephros | 6.52e-23 | 4 |
internal male genitalia | 6.52e-23 | 4 |
nephrogenic cord | 6.52e-23 | 4 |
urogenital ridge | 6.52e-23 | 4 |
pronephric mesoderm | 6.52e-23 | 4 |
rostral part of nephrogenic cord | 6.52e-23 | 4 |
presumptive pronephric mesoderm | 6.52e-23 | 4 |
duct | 8.67e-14 | 7 |
internal genitalia | 4.56e-11 | 9 |
intraembryonic coelom | 4.12e-10 | 10 |
kidney | 1.22e-07 | 14 |
kidney mesenchyme | 1.22e-07 | 14 |
upper urinary tract | 1.22e-07 | 14 |
intermediate mesoderm | 1.22e-07 | 14 |
kidney rudiment | 1.22e-07 | 14 |
kidney field | 1.22e-07 | 14 |
male reproductive organ | 3.18e-07 | 15 |
male organism | 7.35e-07 | 16 |
male reproductive system | 7.35e-07 | 16 |