FFCP PHASE1:Mm9::chr4:130372788..130372826,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20970 | |EntrezGene=20970 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1087 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_ENSMUST00000140623_5end | |association_with_transcript=28bp_to_ENSMUST00000140623_5end | ||
|cluster_id=chr4:130372788..130372826,+ | |||
|description=CAGE_peak_4_at_Sdc3_5end | |description=CAGE_peak_4_at_Sdc3_5end | ||
|id=chr4:130372788..130372826,+ | |id=chr4:130372788..130372826,+ | ||
|ontology_enrichment_celltype=CL:0000117!3.74e-13!23;CL:0000337!3.74e-13!23;CL:0000055!1.02e-12!50;CL:0000393!2.24e-12!39;CL:0000211!2.24e-12!39;CL:0000540!3.83e-11!33;CL:0000047!3.83e-11!33;CL:0000031!3.83e-11!33;CL:0000404!3.83e-11!33;CL:0002319!5.24e-11!43;CL:0000221!1.11e-10!44;CL:0000133!1.11e-10!44 | |ontology_enrichment_celltype=CL:0000117!3.74e-13!23;CL:0000337!3.74e-13!23;CL:0000055!1.02e-12!50;CL:0000393!2.24e-12!39;CL:0000211!2.24e-12!39;CL:0000540!3.83e-11!33;CL:0000047!3.83e-11!33;CL:0000031!3.83e-11!33;CL:0000404!3.83e-11!33;CL:0002319!5.24e-11!43;CL:0000221!1.11e-10!44;CL:0000133!1.11e-10!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.44e-19,23;CL:0000337,2.44e-19,23;CL:0000393,7.42e-16,39;CL:0000211,7.42e-16,39;CL:0000540,2.17e-14,33;CL:0000047,2.17e-14,33;CL:0000031,2.17e-14,33;CL:0000404,2.17e-14,33;CL:0002319,1.16e-13,43;CL:0000221,3.94e-13,44;CL:0000133,3.94e-13,44;CL:0000723,1.39e-08,91;CL:0000048,1.39e-08,91;CL:0002321,3.38e-08,70;CL:0000034,2.47e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.24e-20!75;UBERON:0001016!3.24e-20!75;UBERON:0001017!2.01e-19!73;UBERON:0005743!2.01e-19!73;UBERON:0004121!2.94e-18!102;UBERON:0000924!2.94e-18!102;UBERON:0006601!2.94e-18!102;UBERON:0002346!6.16e-18!71;UBERON:0003075!6.16e-18!71;UBERON:0007284!6.16e-18!71;UBERON:0001049!3.45e-16!52;UBERON:0005068!3.45e-16!52;UBERON:0006241!3.45e-16!52;UBERON:0007135!3.45e-16!52;UBERON:0002020!1.43e-15!34;UBERON:0000955!1.56e-14!50;UBERON:0006238!1.56e-14!50;UBERON:0002616!4.93e-14!49;UBERON:0002791!2.15e-12!29;UBERON:0003528!2.15e-12!29;UBERON:0001893!2.15e-12!29;UBERON:0000033!3.29e-12!63;UBERON:0003080!3.33e-11!40;UBERON:0003056!5.29e-11!49;UBERON:0002780!8.39e-11!39;UBERON:0001890!8.39e-11!39;UBERON:0006240!8.39e-11!39;UBERON:0000025!1.07e-08!114;UBERON:0000956!2.46e-08!21;UBERON:0001869!2.46e-08!21;UBERON:0000203!2.46e-08!21;UBERON:0004111!2.47e-07!122;UBERON:0002021!5.55e-07!10;UBERON:0000411!5.55e-07!10;UBERON:0001950!5.55e-07!10 | |ontology_enrichment_uberon=UBERON:0000073!3.24e-20!75;UBERON:0001016!3.24e-20!75;UBERON:0001017!2.01e-19!73;UBERON:0005743!2.01e-19!73;UBERON:0004121!2.94e-18!102;UBERON:0000924!2.94e-18!102;UBERON:0006601!2.94e-18!102;UBERON:0002346!6.16e-18!71;UBERON:0003075!6.16e-18!71;UBERON:0007284!6.16e-18!71;UBERON:0001049!3.45e-16!52;UBERON:0005068!3.45e-16!52;UBERON:0006241!3.45e-16!52;UBERON:0007135!3.45e-16!52;UBERON:0002020!1.43e-15!34;UBERON:0000955!1.56e-14!50;UBERON:0006238!1.56e-14!50;UBERON:0002616!4.93e-14!49;UBERON:0002791!2.15e-12!29;UBERON:0003528!2.15e-12!29;UBERON:0001893!2.15e-12!29;UBERON:0000033!3.29e-12!63;UBERON:0003080!3.33e-11!40;UBERON:0003056!5.29e-11!49;UBERON:0002780!8.39e-11!39;UBERON:0001890!8.39e-11!39;UBERON:0006240!8.39e-11!39;UBERON:0000025!1.07e-08!114;UBERON:0000956!2.46e-08!21;UBERON:0001869!2.46e-08!21;UBERON:0000203!2.46e-08!21;UBERON:0004111!2.47e-07!122;UBERON:0002021!5.55e-07!10;UBERON:0000411!5.55e-07!10;UBERON:0001950!5.55e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.61e-25,75;UBERON:0001017,2.70e-24,73;UBERON:0002020,8.13e-23,34;UBERON:0000073,1.07e-21,54;UBERON:0001049,3.00e-20,52;UBERON:0005068,3.00e-20,52;UBERON:0006241,3.00e-20,52;UBERON:0007135,3.00e-20,52;UBERON:0003528,1.14e-17,29;UBERON:0002791,1.14e-17,29;UBERON:0001893,1.14e-17,29;UBERON:0004121,2.90e-17,95;UBERON:0000924,2.90e-17,95;UBERON:0006601,2.90e-17,95;UBERON:0002346,1.09e-15,64;UBERON:0003075,1.09e-15,64;UBERON:0007284,1.09e-15,64;UBERON:0000955,1.21e-15,47;UBERON:0006238,1.21e-15,47;UBERON:0002616,6.58e-15,46;UBERON:0003080,6.33e-14,40;UBERON:0002780,2.64e-13,39;UBERON:0001890,2.64e-13,39;UBERON:0006240,2.64e-13,39;UBERON:0010314,2.66e-13,92;UBERON:0010371,3.58e-12,73;UBERON:0000956,3.92e-11,21;UBERON:0001869,3.92e-11,21;UBERON:0000203,3.92e-11,21;UBERON:0002021,1.63e-10,10;UBERON:0000411,1.63e-10,10;UBERON:0001950,1.63e-10,10;UBERON:0003056,1.96e-10,49;UBERON:0002619,2.30e-08,17;UBERON:0002420,4.80e-08,8;UBERON:0007245,4.80e-08,8;UBERON:0010009,4.80e-08,8;UBERON:0010011,4.80e-08,8;UBERON:0000454,4.80e-08,8;UBERON:0000025,1.58e-07,114;UBERON:0002240,2.08e-07,6;UBERON:0005174,2.08e-07,6;UBERON:0001137,2.08e-07,6;UBERON:0003076,3.19e-07,12;UBERON:0003057,3.19e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0.0874204024189974,0.999329285446988,0.404950534779652,1.39912375625629,0.157731082679119,0.411343300817216,0,0.680346321208558,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.709638518536602,0.183546752161682,0.782391344348039,0.65407546914134,0.219686182734472,0.194429899074283,0.419959264876088,0,0,0,0,4.3734104126111,2.86533439938757,4.64104883049698,3.84401275633236,5.81890077199236,6.97214543856797,1.0165335962074,0.889294796111139,14.3983954765024,43.5101199529469,19.8934432184908,11.3848041996994,13.4476406862544,2.07379224616955,3.91517221161903,2.3135745748652,5.99867067247988,10.3808214247258,1.34739879136449,1.72521847832825,0.919218786610021,2.20231761998777,2.80912143787413,2.30409799884365,4.48413378282659,9.69769022185542,4.16730696445408,3.62937898701795,2.8138130501584,3.97275444219706,12.6690291753677,7.97281412474976,3.54158947068071,1.36307147999731,1.43585964202892,0.579728977403356,1.72084775396277,0,0,0,0,0.842666520790511,1.36344258062446,0.779358013808606,1.06001872353102,0.281686839553361,1.28326477414318,0,0,0.432982082022428,0.506719730950197,0,0.45673551887624,1.29468941823586,2.82040064223167,0.520455980298408,3.34912026143355,1.38369298353635,0.904335843315735,2.23418543557839,1.25666591329675,0.494389935468748,0.86759614151947,0.884610551949874,1.29413479957927,0.883366073841574,1.45462575940567,0,1.17112318804619,1.04723353406728,0,0,0,0,1.79748767285787,1.37250180845588,1.88481528169297,1.56441888173049,1.53429274398198,2.90903262383384,1.78465389374533,0.81471491080253,0.995255764880744,0.505445516867349,1.05220927943237,0.520481771850815,0.459804208866946,0.900310649026746,0.753524089178575,0.680364991513279,0.640568601424249,0.562210347358373,0.258703370739016,1.07783996466421,0.567318240503458,0.351902248327898,1.09597866213787,1.11218899690239,1.0447564995665,0.205782136407943,0.199034266818493,0,0,0,0.414251545071004,0.469052119962192,0.540186184383045,0.23674473558521,0.393528463494808,0.462801338662135,0,0.804820204198858,0,0.16455984991348,0,0,0.146199987425332,0.439100230582101,0.536825675041487,0.630869845692382,2.16099685996497,0,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0,0.667134131534611,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0,0,0,0.199141273254367,0.569003702859245,0.456994050438915,0,0,0.387904974335251,0.0701358198903186,0.442655759869801,0.295220295959204,0.784993639206874,0.246794327843601,0.592905254174298,0,0.589676985339609,0.449724224769707,0.811440485554012,0.482354319504834,0.25462585178142,0.863088412352432,0.810676133875177,0.274561413188081,8.62609239164127,1.48856379067401,1.87222603868736,0,0.358794827043824,0,0.923765950833023,0.189491411770485,0.488894929326078,0,0.469380496577004,0.167506257441816,0,0.585400943573396,0.315270288212382,1.32878813789265,0.159454768657487,0.655453258862952,0.518054945597687,0,24.1266054302836,9.24639662491806,0,0.275936746304732,2.56880943980467,1.64096361229084,0.163934945376675,0.504941854408746,0.315508219416257,0.390438744296638,1.07711698866399,0.238968797952552,0.668396022247182,1.13230612315533,1.61924280669958,0.584511715822624,0.790575555893047,2.89189184779626,0.425820255624806,0.534196811001766,0.488660878060728,0.329940245945071,0,0.485561272309963,0.604647113929502,0,1.18120757152309,0.307435147943927,0,0.727067458955011,0,0.316036757935816,0,0,0.340439605753788,0.720244376125241,0.258717367565509,0.428674070063185,0.532020700926821,0.356737635204141,0,0.913394847343798,0.23467170806371,0,0.220528398054962,0.16488625294148,0.161464426695906,0.241251699712623,0.238744688006273,0.164140899745061,0,2.96680483216816,1.02522528478712,0.619160603889667,0.555583582109135,0,0.820165366326151,0.457556346413045,0.169978429993855,0,0,0,0.632671987162271,0.406638934253697,0.324016022465404,0,0.218362563746178,0.539457385539283,0.578574190077352,0.26175594198403,0.388844919875379,0,0.56369293868419,0.747582730219894,0.165458490457098,0.777804753376191,0.387479470433193,0.168956125490778,0.938857909166032,0.5208175393758,0.209718688851422,0,0,0,0.405450430580328,0,0,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0.100826185136841,0.194915761479505,0.192423683280659,0.467507608726276,0.226730383615211,0,0.269141569828427,0,0.965947970160952,0.750729901804728,1.28206136987086,0,0.501572104035363,3.95326289831947,5.06357760157895,5.15605962095457,4.98374228796694,6.16574267793578,3.0215755895588,3.37511250115903,2.2516060161211,3.17199686288943,6.21312374102184,0.207574695168353,0.399024873401031,0.341467211508268,1.94485373654635,0,0.551530525350042,1.11123363900808,0.618105171716683,0.962757628775446,1.01078884705519,0,1.13175804831646,1.49826411951812,0.576226371643824,0.918967503289812,0.476293691283074,0,0.38581844092741,0,1.03039244094078,0.685738504770831,0.354951612318675,0.953744759789284,1.0174249164263,0.846984423737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| ||
|short_description=p4@Sdc3 | |short_description=p4@Sdc3 | ||
}} | }} |
Latest revision as of 10:09, 26 September 2015
Short description: | p4@Sdc3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Sdc3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1087 |
Association with transcript: | 28bp_to_ENSMUST00000140623_5end |
EntrezGene: | Sdc3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.44e-19 | 23 |
neuroblast (sensu Vertebrata) | 2.44e-19 | 23 |
electrically responsive cell | 7.42e-16 | 39 |
electrically active cell | 7.42e-16 | 39 |
neuron | 2.17e-14 | 33 |
neuronal stem cell | 2.17e-14 | 33 |
neuroblast | 2.17e-14 | 33 |
electrically signaling cell | 2.17e-14 | 33 |
neural cell | 1.16e-13 | 43 |
ectodermal cell | 3.94e-13 | 44 |
neurectodermal cell | 3.94e-13 | 44 |
somatic stem cell | 1.39e-08 | 91 |
multi fate stem cell | 1.39e-08 | 91 |
embryonic cell | 3.38e-08 | 70 |
stem cell | 2.47e-07 | 97 |