FFCP PHASE1:Mm9::chr4:33335698..33335727,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=108767 | |EntrezGene=108767 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=Q3TWH3 | |UniProt=Q3TWH3 | ||
|association_with_transcript=34bp_to_NM_001033225,uc008sfu.1_5end | |association_with_transcript=34bp_to_NM_001033225,uc008sfu.1_5end | ||
|cluster_id=chr4:33335698..33335727,- | |||
|description=CAGE_peak_11_at_Pnrc1_5end | |description=CAGE_peak_11_at_Pnrc1_5end | ||
|id=chr4:33335698..33335727,- | |id=chr4:33335698..33335727,- | ||
|ontology_enrichment_celltype=CL:0000066!3.54e-09!25;CL:0000075!9.85e-07!7 | |ontology_enrichment_celltype=CL:0000066!3.54e-09!25;CL:0000075!9.85e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,7.39e-13,3;CL:0000239,2.27e-10,6;CL:0000677,2.27e-10,6;CL:0000584,2.27e-10,6;CL:0000473,3.09e-09,7;CL:0000075,6.66e-09,7;CL:0000066,8.85e-09,25;CL:0000838,1.76e-07,12;CL:0000738,2.93e-07,17;CL:0002087,2.93e-07,17;CL:0002563,6.13e-07,9;CL:0002251,6.13e-07,9;CL:0000542,6.89e-07,13;CL:0000051,6.89e-07,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.51e-09!15;UBERON:0004923!2.24e-08!24;UBERON:0001242!8.73e-08!13;UBERON:0000060!8.73e-08!13;UBERON:0001262!8.73e-08!13;UBERON:0004786!8.73e-08!13;UBERON:0000490!3.69e-07!66 | |ontology_enrichment_uberon=UBERON:0000344!1.51e-09!15;UBERON:0004923!2.24e-08!24;UBERON:0001242!8.73e-08!13;UBERON:0000060!8.73e-08!13;UBERON:0001262!8.73e-08!13;UBERON:0004786!8.73e-08!13;UBERON:0000490!3.69e-07!66 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.02e-15,15;UBERON:0000160,1.80e-10,31;UBERON:0001242,3.17e-10,13;UBERON:0001262,3.17e-10,13;UBERON:0004786,3.17e-10,13;UBERON:0004923,3.32e-09,24;UBERON:0001962,1.06e-08,2;UBERON:0001961,1.06e-08,2;UBERON:0001744,1.06e-08,2;UBERON:0003350,6.13e-07,9;UBERON:0004808,6.13e-07,9;UBERON:0001277,6.13e-07,9 | |||
|phase1_expression=0.160148847104794,5.93258192986914,5.91499011206397,0.60492842261366,1.50268718983904,1.17515490338323,0.467225281191051,0.516493293766305,1.267098499365,1.40438715793196,0,0,0,0.437102012094987,0,0.202475267389826,0,0,0.137114433605739,0.42438965179803,0,0.198581902401771,0,2.3998863419011,2.52350209173887,4.59385571292016,5.1691439539089,5.17130958446134,0.950117097281869,0.756090389279792,4.43461021310609,0,0,0,0,0,0.204169356262369,0.837063261473815,0.7813353445238,0.523523743973798,0,0.683045484958446,0.485510353031154,0.881277725829041,0.811015449756117,0.917733760808408,0,0,0,0,0,0,1.8456086666351,2.90144856804538,2.35265659399725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0.649776417447669,0.448026887097336,0,0,0,0,0.281686839553361,1.28326477414318,0,0,0.865964164044856,0.253359865475099,0.505524445014783,0.34255163915718,0.258937883647172,0,0,0,0,0.301445281105245,0,0,0.494389935468748,0,0,0,0,0,0,0,0,1.27728527604296,0.239630249011841,0.599902730993408,0.381210681219194,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0,0.150704817835715,0,0,0,0,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,3.30418782983798,0.793351699990633,0,0,0,0,0,0,1.89811624617805,0.164698954724011,0.251335208800269,0.994782360205754,0.974820435595601,1.79763881730844,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,1.5601883655728,0.505157755894224,0.717589654087649,0.964887042726734,0,0,0,0,0,0,0.238043640886014,0,0.315270288212382,0,0,0,0.172684981865896,0,1.50791283939272,0,0.491764273019036,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0.21183207086382,0.220528398054962,0,0,0.180938774784468,0,0,1.45740418314925,0,0,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0.679913719975421,0.279902904647316,0.690999869022119,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,2.25477175473676,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0,0.13020438484395,0,0.483168241652012,0,0,0.202725215290164,0,0,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0.160148847104794,5.93258192986914,5.91499011206397,0.60492842261366,1.50268718983904,1.17515490338323,0.467225281191051,0.516493293766305,1.267098499365,1.40438715793196,0,0,0,0.437102012094987,0,0.202475267389826,0,0,0.137114433605739,0.42438965179803,0,0.198581902401771,0,2.3998863419011,2.52350209173887,4.59385571292016,5.1691439539089,5.17130958446134,0.950117097281869,0.756090389279792,4.43461021310609,0,0,0,0,0,0.204169356262369,0.837063261473815,0.7813353445238,0.523523743973798,0,0.683045484958446,0.485510353031154,0.881277725829041,0.811015449756117,0.917733760808408,0,0,0,0,0,0,1.8456086666351,2.90144856804538,2.35265659399725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0.649776417447669,0.448026887097336,0,0,0,0,0.281686839553361,1.28326477414318,0,0,0.865964164044856,0.253359865475099,0.505524445014783,0.34255163915718,0.258937883647172,0,0,0,0,0.301445281105245,0,0,0.494389935468748,0,0,0,0,0,0,0,0,1.27728527604296,0.239630249011841,0.599902730993408,0.381210681219194,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0,0.150704817835715,0,0,0,0,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,3.30418782983798,0.793351699990633,0,0,0,0,0,0,1.89811624617805,0.164698954724011,0.251335208800269,0.994782360205754,0.974820435595601,1.79763881730844,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,1.5601883655728,0.505157755894224,0.717589654087649,0.964887042726734,0,0,0,0,0,0,0.238043640886014,0,0.315270288212382,0,0,0,0.172684981865896,0,1.50791283939272,0,0.491764273019036,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0.21183207086382,0.220528398054962,0,0,0.180938774784468,0,0,1.45740418314925,0,0,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0.679913719975421,0.279902904647316,0.690999869022119,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,2.25477175473676,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0,0.13020438484395,0,0.483168241652012,0,0,0.202725215290164,0,0,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p11@Pnrc1 | |short_description=p11@Pnrc1 | ||
}} | }} |
Latest revision as of 22:12, 26 September 2015
Short description: | p11@Pnrc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Pnrc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | 34bp_to_NM_001033225, uc008sfu.1_5end |
EntrezGene: | Pnrc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 7.39e-13 | 3 |
brush border epithelial cell | 2.27e-10 | 6 |
gut absorptive cell | 2.27e-10 | 6 |
enterocyte | 2.27e-10 | 6 |
defensive cell | 3.09e-09 | 7 |
columnar/cuboidal epithelial cell | 6.66e-09 | 7 |
epithelial cell | 8.85e-09 | 25 |
lymphoid lineage restricted progenitor cell | 1.76e-07 | 12 |
leukocyte | 2.93e-07 | 17 |
nongranular leukocyte | 2.93e-07 | 17 |
intestinal epithelial cell | 6.13e-07 | 9 |
epithelial cell of alimentary canal | 6.13e-07 | 9 |
lymphocyte | 6.89e-07 | 13 |
common lymphoid progenitor | 6.89e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.02e-15 | 15 |
intestine | 1.80e-10 | 31 |
intestinal mucosa | 3.17e-10 | 13 |
wall of intestine | 3.17e-10 | 13 |
gastrointestinal system mucosa | 3.17e-10 | 13 |
organ component layer | 3.32e-09 | 24 |
gut-associated lymphoid tissue | 1.06e-08 | 2 |
mucosa-associated lymphoid tissue | 1.06e-08 | 2 |
lymphoid tissue | 1.06e-08 | 2 |
epithelium of mucosa | 6.13e-07 | 9 |
gastrointestinal system epithelium | 6.13e-07 | 9 |
intestinal epithelium | 6.13e-07 | 9 |