FFCP PHASE1:Hg19::chr14:106328131..106328143,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3507 | |EntrezGene=3507 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=5541 | |HGNC=5541 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=24bp_to_X58529_5end | |association_with_transcript=24bp_to_X58529_5end | ||
|cluster_id=chr14:106328131..106328143,- | |||
|coexpression_cluster_id=C350 | |||
|description=CAGE_peak_4_at_IGHM_5end | |description=CAGE_peak_4_at_IGHM_5end | ||
|id=chr14:106328131..106328143,- | |id=chr14:106328131..106328143,- | ||
|ontology_enrichment_celltype=CL:0000945!1.27e-56!24;CL:0000826!1.27e-56!24;CL:0000236!6.96e-35!14;CL:0000542!3.34e-29!53;CL:0000051!3.34e-29!53;CL:0000838!3.40e-27!52;CL:0002087!3.48e-14!119;CL:0002031!4.01e-12!124;CL:0000738!7.61e-12!140;CL:0000817!8.00e-10!3;CL:0002032!1.12e-09!165;CL:0000837!1.12e-09!165;CL:0000037!5.69e-09!172;CL:0000566!5.69e-09!172;CL:0000988!4.59e-08!182;CL:0000785!5.04e-07!2;CL:0000955!5.04e-07!2;CL:0000818!5.04e-07!2;CL:0000954!5.04e-07!2;CL:0000816!5.04e-07!2 | |ontology_enrichment_celltype=CL:0000945!1.27e-56!24;CL:0000826!1.27e-56!24;CL:0000236!6.96e-35!14;CL:0000542!3.34e-29!53;CL:0000051!3.34e-29!53;CL:0000838!3.40e-27!52;CL:0002087!3.48e-14!119;CL:0002031!4.01e-12!124;CL:0000738!7.61e-12!140;CL:0000817!8.00e-10!3;CL:0002032!1.12e-09!165;CL:0000837!1.12e-09!165;CL:0000037!5.69e-09!172;CL:0000566!5.69e-09!172;CL:0000988!4.59e-08!182;CL:0000785!5.04e-07!2;CL:0000955!5.04e-07!2;CL:0000818!5.04e-07!2;CL:0000954!5.04e-07!2;CL:0000816!5.04e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.49e-108;24!CL:0000236;3.52e-80;13!CL:0000542;7.85e-35;53!CL:0000817;8.05e-09;1!CL:0000946;1.47e-08;1!CL:0000785;1.47e-08;1!CL:0000819;1.47e-08;1!CL:0000786;1.47e-08;1!CL:0002087;4.31e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.91e-108,24;CL:0000826,2.91e-108,24;CL:0000236,6.69e-87,14;CL:0000542,1.10e-52,53;CL:0000051,1.10e-52,53;CL:0000838,3.57e-48,52;CL:0000817,2.15e-22,3;CL:0002087,4.11e-22,115;CL:0002031,1.02e-18,120;CL:0000738,3.70e-18,136;CL:0000785,2.41e-15,2;CL:0000955,2.41e-15,2;CL:0000818,2.41e-15,2;CL:0000954,2.41e-15,2;CL:0000816,2.41e-15,2;CL:0002032,8.78e-15,161;CL:0000837,8.78e-15,161;CL:0000037,5.13e-14,168;CL:0000988,4.06e-13,177;CL:0000819,1.13e-08,1;CL:0000946,2.22e-08,1;CL:0000786,2.22e-08,1;CL:0000980,2.22e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000051;7.85e-35;53!CL:0000954;2.07e-15;2!UBERON:0001045;1.47e-08;1 | |||
|ontology_enrichment_disease=DOID:0060058!6.92e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:12603;3.06e-09;1!DOID:4960;3.87e-09;1!DOID:0070004;3.87e-09;1!DOID:0060073;1.47e-08;1!DOID:8675;1.47e-08;1!DOID:0060058;3.27e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,3.06e-09,1;DOID:4960,3.87e-09,1;DOID:0070004,3.87e-09,1;DOID:0060073,1.13e-08,1;DOID:8675,1.13e-08,1;DOID:0060058,3.13e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.87e-10!115;UBERON:0004177!1.02e-09!7;UBERON:0002106!1.65e-09!3;UBERON:0004854!1.65e-09!3;UBERON:0009034!1.65e-09!3;UBERON:0002095!1.65e-09!3;UBERON:0004782!1.65e-09!3;UBERON:0003281!1.65e-09!3;UBERON:0009664!1.65e-09!3;UBERON:0002296!1.65e-09!3;UBERON:0005602!1.65e-09!3;UBERON:0001179!1.65e-09!3;UBERON:0006293!1.65e-09!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.39e-10;3!UBERON:0002372;8.05e-09;1!UBERON:0001961;8.05e-09;1!UBERON:0001744;8.05e-09;1!UBERON:0001042;8.05e-09;1!UBERON:0001735;8.05e-09;1!UBERON:0001154;1.47e-08;1!UBERON:0001153;1.47e-08;1!UBERON:0009854;1.47e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.46e-10,3;UBERON:0004854,1.46e-10,3;UBERON:0009034,1.46e-10,3;UBERON:0002095,1.46e-10,3;UBERON:0004782,1.46e-10,3;UBERON:0003281,1.46e-10,3;UBERON:0009664,1.46e-10,3;UBERON:0002296,1.46e-10,3;UBERON:0005602,1.46e-10,3;UBERON:0001179,1.46e-10,3;UBERON:0006293,1.46e-10,3;UBERON:0002372,9.02e-09,1;UBERON:0001961,9.02e-09,1;UBERON:0001744,9.02e-09,1;UBERON:0001735,9.02e-09,1;UBERON:0001154,1.05e-08,1;UBERON:0001153,1.05e-08,1;UBERON:0001045,1.05e-08,1 | |||
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| ||
|short_description=p4@IGHM | |short_description=p4@IGHM | ||
}} | }} |
Latest revision as of 21:05, 18 September 2015
Short description: | p4@IGHM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IGHM_5end |
Coexpression cluster: | C350_b_lymph_acute_CD19_lymphoma_spleen_B |
Association with transcript: | 24bp_to_X58529_5end |
EntrezGene: | IGHM |
HGNC: | 5541 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.91e-108 | 24 |
pro-B cell | 2.91e-108 | 24 |
B cell | 6.69e-87 | 14 |
lymphocyte | 1.10e-52 | 53 |
common lymphoid progenitor | 1.10e-52 | 53 |
lymphoid lineage restricted progenitor cell | 3.57e-48 | 52 |
precursor B cell | 2.15e-22 | 3 |
nongranular leukocyte | 4.11e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 1.02e-18 | 120 |
leukocyte | 3.70e-18 | 136 |
mature B cell | 2.41e-15 | 2 |
pre-B-II cell | 2.41e-15 | 2 |
transitional stage B cell | 2.41e-15 | 2 |
small pre-B-II cell | 2.41e-15 | 2 |
immature B cell | 2.41e-15 | 2 |
hematopoietic oligopotent progenitor cell | 8.78e-15 | 161 |
hematopoietic multipotent progenitor cell | 8.78e-15 | 161 |
hematopoietic stem cell | 5.13e-14 | 168 |
hematopoietic cell | 4.06e-13 | 177 |
B-1 B cell | 1.13e-08 | 1 |
antibody secreting cell | 2.22e-08 | 1 |
plasma cell | 2.22e-08 | 1 |
plasmablast | 2.22e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.46e-10 | 3 |
gastrointestinal system mesentery | 1.46e-10 | 3 |
stomach region | 1.46e-10 | 3 |
mesentery | 1.46e-10 | 3 |
gastrointestinal system serosa | 1.46e-10 | 3 |
mesentery of stomach | 1.46e-10 | 3 |
gut mesentery | 1.46e-10 | 3 |
dorsal mesentery | 1.46e-10 | 3 |
dorsal mesogastrium | 1.46e-10 | 3 |
peritoneal cavity | 1.46e-10 | 3 |
spleen primordium | 1.46e-10 | 3 |
tonsil | 9.02e-09 | 1 |
mucosa-associated lymphoid tissue | 9.02e-09 | 1 |
lymphoid tissue | 9.02e-09 | 1 |
tonsillar ring | 9.02e-09 | 1 |
vermiform appendix | 1.05e-08 | 1 |
caecum | 1.05e-08 | 1 |
midgut | 1.05e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 3.06e-09 | 1 |
bone marrow cancer | 3.87e-09 | 1 |
myeloma | 3.87e-09 | 1 |
lymphatic system cancer | 1.13e-08 | 1 |
lymphosarcoma | 1.13e-08 | 1 |
lymphoma | 3.13e-07 | 10 |